Contig 007948:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF021H06Sequence527007948 (8)ref|XP_004249928.1|2e-28PREDICTED: phosphoribosylaminoimidazole carboxylase, chloroplastic-like [Solanu662004012 (6)ref|XP_009625603.1|8e-51PREDICTED: phosphoribosylaminoimidazole carboxylase, chloroplastic-like isoform
JMFF037C04Sequence614007948 (8)706004012 (6)ref|XP_011101933.1|3e-99PREDICTED: phosphoribosylaminoimidazole carboxylase, chloroplastic-like isoform
JMFF041P08Sequence642007948 (8)602004012 (6)ref|XP_011101933.1|3e-79PREDICTED: phosphoribosylaminoimidazole carboxylase, chloroplastic-like isoform
JMFS102B09Sequence620007948 (8)
JMSF004D21Sequence257007948 (8)
JMSF022I24Sequence674007948 (8)ref|XP_004249928.1|9e-18PREDICTED: phosphoribosylaminoimidazole carboxylase, chloroplastic-like [Solanu762004012 (6)ref|XP_011079001.1|1e-111PREDICTED: phosphoribosylaminoimidazole carboxylase, chloroplastic-like isoform
JMSF032O03Sequence639007948 (8)734004012 (6)ref|XP_011079001.1|1e-107PREDICTED: phosphoribosylaminoimidazole carboxylase, chloroplastic-like isoform
JMSF038M07Sequence666007948 (8)ref|XP_004249928.1|2e-62PREDICTED: phosphoribosylaminoimidazole carboxylase, chloroplastic-like [Solanu909004012 (6)ref|XP_009625603.1|5e-99PREDICTED: phosphoribosylaminoimidazole carboxylase, chloroplastic-like isoform

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF038M07+ AACTTAGGAAGCGGAATGGCAG
                      ____________________________________________________________
consensus AACTTAGGAAGCGGAATGGCAG
 
. : . : . : . : . : . :
JMSF038M07+ ATTTAGAAAAGTGGACCTTTTGAAGATATTTGTCCTGGATTATCCGGATTGTTGAGGCTT
                      ____________________________________________________________
consensus ATTTAGAAAAGTGGACCTTTTGAAGATATTTGTCCTGGATTATCCGGATTGTTGAGGCTT
 
. : . : . : . : . : . :
JMSF038M07+ TAGGCTCACAGTCCACCCCTTGCTGCTCCAACTTTTCAATTGTGGCAGCATCAACATGCT
                      ____________________________________________________________
consensus TAGGCTCACAGTCCACCCCTTGCTGCTCCAACTTTTCAATTGTGGCAGCATCAACATGCT
 
. : . : . : . : . : . :
JMSF038M07+ CAATCTCAATCGTCAACACATCACACCTTTTTCCAAATTCTTCAACAGTGGCACTATCAT
JMFF021H06+ GTCAACACATCACACCTTTTTCCAAATTCTTCAACAGTGGCACTATCAT
JMSF022I24+ AT
                      ____________________________________________________________
consensus CAATCTCAATCGTCAACACATCACACCTTTTTCCAAATTCTTCAACAGTGGCACTATCAT
 
. : . : . : . : . : . :
JMSF038M07+ CATAGCTTCCAACCACATGATGATGAGCCAACAAACTTGCAGGACAATCCTTCATTGGGT
JMFF021H06+ CATAGCTTCCAACCACATGATGATGAGCCAACAAACTTGCAGGACAATCCTTCATTGGGT
JMSF022I24+ CATAGCTTCCAACCACATGATGATGAGCCAACAAACTTGCAGGACAATCCTTCATTGGGT
                      ____________________________________________________________
consensus CATAGCTTCCAACCACATGATGATGAGCCAACAAACTTGCAGGACAATCCTTCATTGGGT
 
. : . : . : . : . : . :
JMSF038M07+ CCAAGACAATAACTTTGATGGCCATCTCCGATGCTGCTTGACACAACATACGGCCAAGTT
JMFF021H06+ CCAAGACAATAACTTTGATGGCCATCTCCGATGCTGCTTGACACAACATACGGCCAAGTT
JMSF022I24+ CCAAGACAATAACTTTGATGGCCATCTCCGATGCTGCTTGACACAACATACGGCCAAGTT
                      ____________________________________________________________
consensus CCAAGACAATAACTTTGATGGCCATCTCCGATGCTGCTTGACACAACATACGGCCAAGTT
 
. : . : . : . : . : . :
JMSF038M07+ GTCCTCCTCCCAGAACCCCAACAACAATTTCAGATACTCCATGAATGGGTGAAACACTGC
JMFF021H06+ GTCCTCCTCCCAGAACCCCAACAACAATTTCAGATACTCCATGAATGGGTGAAACACTGC
JMSF022I24+ GTCCTCCTCCCAGAACCCCAACAACAATTTCAGATACTCCATGAATGGGTGAAACACTGC
JMFS102B09+ TGAAACACTGC
JMFF041P08+ GGTGAAACACTGC
                      ____________________________________________________________
consensus GTCCTCCTCCCAGAACCCCAACAACAATTTCAGATACTCCATGAATGGGTGAAACACTGC
 
. : . : . : . : . : . :
JMSF038M07+ TCCTGTCCGATGCCGGCGTTTCTTGAGCTTTCAAAGAAGCTTTGCAGGGCAGAACGGCGG
JMFF021H06+ TCCTGTCCGATGCCGGCGTTTCTTGAGCTTTCAAAGAAGCTTTGCAGGGCAGAACGGCGG
JMSF022I24+ TCCTGTCCGGTGCCGGCGTTTCTTGAGCTTTCAAAGAAGCTTTGCAGGGCAGAATGGCGG
JMFS102B09+ TCCTGTCCGGTGCCGGCGTTTCTTGAGCTTTCAAAGAAGCTTTGCAGGGCAGAATGGCGG
JMFF041P08+ TCCTGTCCGGTGCCGGCGTTTCTTGAGCTTTCAAAGAAGCTTTGCAGGGCAGAATGGCGG
JMFF037C04+ CTTGAGCTTTCAAAGAAGCTTTGCAGGGCAGAATGGCGG
JMSF032O03+ TCTTGAGCTTTCAAAGAAGCTTTGCAGGGCAGAATGGCGG
                      ____________________________________________________________
consensus TCCTGTCCGGTGCCGGCGTTTCTTGAGCTTTCAAAGAAGCTTTGCAGGGCAGAATGGCGG
 
. : . : . : . : . : . :
JMSF038M07+ AGCTACATTGCGCATGTTGGGAAAGCATCCAAGAAGAGGAAGAAGAAAGTTGCTTGAGGA
JMFF021H06+ AGCTACATTGCGCATGTTGGGAAAGCATCCAAGAAGAGGAAGAAGAAAGTTGCTTGAGGA
JMSF022I24+ AGCTACATTGGGCATGTTGGGAAAGCATCCAAGAAGAGGAAGAAGAAAGTTGCTTGAGGA
JMFS102B09+ AGCTACATTGGGCATGTTGGGAAAGCATCCAAGAAGAGGAAGAAGAAAGTTGCTTGAGGA
JMFF041P08+ AGCTACATTGGGCATGTTGGGAAAGCATCCAAGAAGAGGAAGAAGAAAGTTGCTTGAGGA
JMFF037C04+ AGCTACATTGGGCATGTTGGGAAAGCATCCAAGAAGAGGAAGAAGAAAGTTGCTTGAGGA
JMSF032O03+ AGCTACATTGGGCATGTTGGGAAAGCATCCAAGAAGAGGAAGAAGAAAGTTGCTTGAGGA
                      ____________________________________________________________
consensus AGCTACATTGGGCATGTTGGGAAAGCATCCAAGAAGAGGAAGAAGAAAGTTGCTTGAGGA
 
. : . : . : . : . : . :
JMSF038M07+ TTAAGGTGCGTTGAGGCTTAGAATTAAGAACACCTCCAAA-GATGGAACTTTTACAGGGA
JMFF021H06+ CTAAGGTGCGTTGAGGCTTAGAATTAAGAACACCTCCAAA-GATGGAACTTTTACAGGGA
JMSF022I24+ TTAAGGTGTGTTGAGGCTTAGAATTAAG-ACACCTACAAA-GATGGAACTTTTACAGGGA
JMFS102B09+ TTAAGGTGTGTTGAGGCTTAGAATTAAGAACACCTACAAA-GATGGAACTTTTACAGGGA
JMFF041P08+ TTAAGGTGTGTTGAGGCTTAGAATTAAGAACACCTACAAA-GATGGAACTTTTACAGGGA
JMFF037C04+ TTAAGGTGTGTTGAGGCTTAGAATTAAGAACACCTACAAAGGATGGAACTTTTACAGGGA
JMSF032O03+ TTAAGGTGTGTTGAGGCTTAGAATTAAGAACACCTACAAA-GATGGAACTTTTACAGGGA
                      ____________________________________________________________
consensus TTAAGGTGTGTTGAGGCTTAGAATTAAGAACACCTACAAA-GATGGAACTTTTACAGGGA
 
. : . : . : . : . : . :
JMSF038M07+ GCTGAGCTGATTCTGTGACAATGGCCGCTGCTGCAAAGTGGGGCTGCAGATTTGGTAAAG
JMFF021H06+ GCTGAGCTGATTCTGTGACAATGGCCGCTGCTGCAAAGTGGGGCTGCAGATTTGGTAAAG
JMSF022I24+ GCTGAGCTGATTCGGTGACAATGGCCGCTGCTGCAAAGTGGGGCTGCAGATTTGGTAAAG
JMFS102B09+ GCTGAGCTGATTCGGTGACAATGGCCGCTGCTGCAAAGTGGGGCTGCAGATTTGGTAAAG
JMFF041P08+ GCTGAGCTGATTCGGTGACAATGGCCGCTGCTGCAAAGTGGGGCTGCAGATTTGGTAAAG
JMFF037C04+ GCTGAGCTGATTCGGTGACAATGGCCGCTGCTGCAAAGTGGGGCTGCAGATTTGGTAAAG
JMSF032O03+ GCTGAGCTGATTCGGTGACAATGGCCGCTGCTGCAAAGTGGGGCTGCAGATTTGGTAAAG
                      ____________________________________________________________
consensus GCTGAGCTGATTCGGTGACAATGGCCGCTGCTGCAAAGTGGGGCTGCAGATTTGGTAAAG
 
. : . : . : . : . : . :
JMSF038M07+ CTCTGCATCCCCTTTCGCTTTCTCTTGAAAAAGAATAGAATT
JMFF021H06+ CTCTGCATCCCCTTTCGCTTTCTCTTGAAAAAGAATAGAATT
JMSF022I24+ CTCTGCATCCCCTTTCGCTTTCTCTTGAAAAAGAATAGAATTGGCGTGTGTCAGAGGCTC
JMFS102B09+ CTCTGCATCCCCTTTCGCTTTCTCTTGAAAAAGAATAGAATTGGCGTGTGTCAGAGGCTC
JMFF041P08+ CTCTGCATCCCCTTTCGCTTTCTCTTGAAAAAGAATAGAATTGGCGTGTGTCAGAGGCTC
JMFF037C04+ CTCTGCATCCCCTTTCGCTTTCTCTTGAAAAAGAATAGAATTGGCGTGTGTCAGAGGCTC
JMSF032O03+ CTCTGCATCCCCTTTCGCTTTCTCTTGAAAAAGAATAGAATTGGCGTGTGTCAGAGGCTC
                      ____________________________________________________________
consensus CTCTGCATCCCCTTTCGCTTTCTCTTGAAAAAGAATAGAATTGGCGTGTGTCAGAGGCTC
 
. : . : . : . : . : . :
JMSF022I24+ AGAGCTGGTGGCGAGGCAGCCAGCGGCAAGCCGGTGTCCAGTAAGGCAGTAACTCTCTGT
JMFS102B09+ AGAGCTGGTGGCGAGGCAGCCAGCGGCAAGCCGGTGTCCAGTAAGGCAGTAACTCTCTGT
JMFF041P08+ AGAGCTGGTGGCGAGGCAGCCAGCGGCAAGCCGGTGTCCAGTAAGGCAGTAACTCTCTGT
JMFF037C04+ AGAGCTGGTGGCGAGGCAGCCAGCGGCAAGCCGGTGTCCAGTAAGGCAGTAACTCTCTGT
JMSF032O03+ AGAGCTGGTGGCGAGGCAGCCAGCGGCAAGCCGGTGTCCAGTAAGGCAGTAACTCTCTGT
                      ____________________________________________________________
consensus AGAGCTGGTGGCGAGGCAGCCAGCGGCAAGCCGGTGTCCAGTAAGGCAGTAACTCTCTGT
 
. : . : . : . : . : . :
JMSF022I24+ CCTGCGTAGCACGTCTCGCTGTGTCAGAGGCAGAGCTGGTGACAATTGATGAGGCAGGAC
JMFS102B09+ CCTGCGTAGCACGTCTCGCTGTGTCAGAGGCAGAGCTGGTGACAATTGATGAGGCAGGAC
JMFF041P08+ CCTGCGTAGCACGTCTCGCTGTGTCAGAGGCAGAGCTGGTGACAATTGATGAGGCAGGAC
JMFF037C04+ CCTGCGTAGCACGTCTCGCTGTGTCAGAGGCAGAGCTGGTGACAATTGATGAGGCAGGAC
JMSF004D21+ GTAGCACGTCTCGCTGTGTCAGAGGCAGAGCTGGTGACAATTGATGAGGCAGGAC
JMSF032O03+ CCTGCGTAGCACGTCTCGCTGTGTCAGAGGCAGAGCTGGTGACAATTGATGAGGCAGGAC
                      ____________________________________________________________
consensus CCTGCGTAGCACGTCTCGCTGTGTCAGAGGCAGAGCTGGTGACAATTGATGAGGCAGGAC
 
. : . : . : . : . : . :
JMSF022I24+ TCCAGTGAGGCGGTAGGCGGCAGGACTCCAGTGAGGCGGTAGGCGGCGAGTGGTGGGCCG
JMFS102B09+ TCCAGTGAGGCGGTAGGCGGCAGGACTCCAGTGAGGCGGTAGGCGGCGAGTGGTGGGCCG
JMFF041P08+ TCCAGTGAGGCGGTAGGCGGCAGGACTCCAGTGAGGCGGTAGGCGGCGAGTGGTGGGCCG
JMFF037C04+ TCCAGTGAGGCGGTAGGCGGCAGGACTCCAGTGAGGCGGTAGGCGGCGAGTGGTGGGCCG
JMSF004D21+ TCCAGTGAGGCGGTAGGCGGCAGGACTCCANTGAGGCGGTAGGCGGCGAGTGGTGGNCCG
JMSF032O03+ TCCAGTGAGGCGGTAGGCGGCAGGACTCCAGTGAGGCGGTAGGCGGCGAGTGGTGGGCCG
                      ____________________________________________________________
consensus TCCAGTGAGGCGGTAGGCGGCAGGACTCCAGTGAGGCGGTAGGCGGCGAGTGGTGGGCCG
 
. : . : . : . : . : . :
JMSF022I24+ GTGTCTCCTTGACT
JMFS102B09+ GTGTCTCCTTGACTCCTCGAGGACGAGGGAGGAGTTGGCGAGTTGCAGCCACTAAGTCGC
JMFF041P08+ GTGTCTCCTTGACTCCTCGAGGACGAGGGAGGAGTTGGCGAGTTGCAGCCACTAAGTCGC
JMFF037C04+ GTGTCTCCTTGACTCCTCGAGGACGAGGGAGGAGTTGGCGAGTTGCAGCCACTAAGTCGC
JMSF004D21+ GTGTCTCCTTGACTCCTCGAGGACGAGGGAGGAGTTGGCGAGTTGCAGCCACTAAGTCGC
JMSF032O03+ GTGTCTCCTTGACTCCTCGAGGACGAGGGAGGAGTTGGCGAGTTGCAGCCACTAAGTCGC
                      ____________________________________________________________
consensus GTGTCTCCTTGACTCCTCGAGGACGAGGGAGGAGTTGGCGAGTTGCAGCCACTAAGTCGC
 
. : . : . : . : . : . :
JMFS102B09+ AGACTGGGTAGTGTCGTAGTGAGGTATGACCGTTTGGCGTCTGAGGATGTGAGGAGCAAG
JMFF041P08+ AGACTGGGTAGTGTCGTAGTGAGGTATGACCGTTTGGCGTCTGAGGATGTGAGGAGCAAG
JMFF037C04+ AGACTGGGTAGTGTCGTAGTGAGGTATGACCGTTTGGCGTCTGAGGATGTGAGGAGCAAG
JMSF004D21+ AGACTGGGTAGTGTCGTAGTGAGGTATGACCGTTNGGCGTCTGAGGATGTGAGGANCAAG
JMSF032O03+ AGACTGGGTAGTGTCGTAGTGAGGTATGACCGTTTGGCGTCTGAGGATGTGAGGAGCAAG
                      ____________________________________________________________
consensus AGACTGGGTAGTGTCGTAGTGAGGTATGACCGTTTGGCGTCTGAGGATGTGAGGAGCAAG
 
. : . : . : . : . : . :
JMFS102B09+ AGCAGAGGGC
JMFF041P08+ AGCAGAGGGCGTGAGGGAGTGGGGCGGTGA
JMFF037C04+ AGCAGAGGGCGTGAGGGAGTGGGGCGGTGA
JMSF004D21+ AGCAGAGGGCNTGAGGGAGTGG
JMSF032O03+ AGCAGAGGGCGTGAGGGAGTGGGGCGGTGAGAGACGAGGGCGGAATCCGGCGGAAGAGTC
                      ____________________________________________________________
consensus AGCAGAGGGCGTGAGGGAGTGGGGCGGTGAGAGACGAGGGCGGAATCCGGCGGAAGAGTC