| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS021F06 | Sequence | 620 | 007942 (5) | ref|XP_009609977.1| | 3e-36 | PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 [Nicotiana tomentosiformis] | |||||
| JMFS054B11 | Sequence | 626 | 007942 (5) | ref|XP_009609977.1| | 8e-34 | PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 [Nicotiana tomentosiformis] | |||||
| JMFS146B06 | Sequence | 626 | 007942 (5) | ref|XP_009609977.1| | 2e-34 | PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 [Nicotiana tomentosiformis] | |||||
| JMSF023A11 | Sequence | 678 | 007942 (5) | ref|XP_009609977.1| | 1e-36 | PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 [Nicotiana tomentosiformis] | 736 | 001363 (2) | ref|XP_009609977.1| | 2e-57 | PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 [Nicotiana tomentosiformis] |
| JMSF031L01 | Sequence | 646 | 007942 (5) | ref|XP_009609977.1| | 1e-20 | PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 [Nicotiana tomentosiformis] | 335 | 001363 (2) | ref|XP_006348364.1| | 4e-07 | PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like isoform X1 [Solanum tu |
This contig is upended
. : . : . : . : . : . :
JMFS054B11+ AGACC
JMFS146B06+ AGACC
JMFS021F06+ GCACTTATGTTACTATCAACTGAGACC
JMSF023A11+ AGAAACTGTGCACTTATGTTACTATCAACTGAGACC
____________________________________________________________
consensus AGAAACTGTGCACTTATGTTACTATCAACTGAGACC
. : . : . : . : . : . :
JMFS054B11+ CGTCCAGGGAGCTCTTCCAATAGCTGGCACTCTTGTTTGTGAATTTCCCTCCAATGGAGA
JMFS146B06+ CGTCCAGGGAGCTCTTCCAATAGCTGGCACTCTTGTTTGTGAATTTCCCTCCAATGGAGA
JMFS021F06+ CGTCCAGGGAGCTCTTCCAATAGCTGGCACTCTTGTTTGTGAATTTCCCTCCAATGGAGA
JMSF023A11+ CGTCCAGGGAGCTCTTCCAATAGCTGGCACTCTTGTTTGTGAATTTCCCTCCAATGGAGA
____________________________________________________________
consensus CGTCCAGGGAGCTCTTCCAATAGCTGGCACTCTTGTTTGTGAATTTCCCTCCAATGGAGA
. : . : . : . : . : . :
JMFS054B11+ ATCTGGCACTTGCCCGAACAATAGCGAACAGACTTGCATCTAGAGCACCGAGTTGTTGCT
JMFS146B06+ ATCTGGCACTTGCCCGAACAATAGCGAACAGACTTGCATCTAGAGCACCGAGTTGTTGCT
JMFS021F06+ ATCTGGCACTTGCCCGAACAATAGCGAACAGACTTGCATCTAGAGCACCGAGTTGTTGCT
JMSF023A11+ ATCTGGCACTTGCCCGAACAATAGCGAACAGACTTGCATCTAGAGCACCGAGTTGTTGCT
JMSF031L01+ CGAACAATAGCGAACAGACTTGCATCTAGAGCACCGAGTTGTTGCT
____________________________________________________________
consensus ATCTGGCACTTGCCCGAACAATAGCGAACAGACTTGCATCTAGAGCACCGAGTTGTTGCT
. : . : . : . : . : . :
JMFS054B11+ TGACCATAGCACCTTGCACACTGATGAAGCGAAGTATTTGGCAAAGGCACACTTGGCACA
JMFS146B06+ TGACCATAGCACCTTGCACACTGATGAAGCGAAGTATTTGGCAAAGGCACACTTGGCACA
JMFS021F06+ TGACCATAGCACCTTGCACACTGATGAAGCGAAGTATTTGGCAAAGGCACACTTGGCACA
JMSF023A11+ TGACCATAGCACCTTGCACACTGATGAAGCGAAGTATTTGGCAAAGGCACACTTGGCACA
JMSF031L01+ TGACCATAGCACCTTGCACACTGATGAAGCGAAGTATTTGGCAAAGGCACACTTGGCACA
____________________________________________________________
consensus TGACCATAGCACCTTGCACACTGATGAAGCGAAGTATTTGGCAAAGGCACACTTGGCACA
. : . : . : . : . : . :
JMFS054B11+ CTTGCAACCTGATGAAGTGAATTGCTCGGCAAAGGTACAGGTACAGGTACAGGAGGAAAG
JMFS146B06+ CTTGCAACCTGATGAAGTGAATTGCTCGGCAAAGGTACAGGTACAGGTACAGGAGGAAAG
JMFS021F06+ CTTGCAACCTGATGAAGTGAATTGCTCGGCAAAGGTACAGGTACAGGTACAGGAGGAAAG
JMSF023A11+ CTTGCAACCTGATGAAGTGAATTGCTCGGCAAAGGTACAGGTACAGGTACAGGAGGAAAG
JMSF031L01+ CTTGCAACCTGATGAAGTGAATTGCTCGGCAAAGGTACAGGTACAGGTACAGGAGGAAAG
____________________________________________________________
consensus CTTGCAACCTGATGAAGTGAATTGCTCGGCAAAGGTACAGGTACAGGTACAGGAGGAAAG
. : . : . : . : . : . :
JMFS054B11+ ACATTGGCAGCAGACATGGCTTCTACCCTAAAAGCTTCTTCAGCAGCCTGTTGAGCTAAT
JMFS146B06+ ACATTGGCAGCAGACATGGCTTCTACCCTAAAAGCTTCTTCAGCAGCCTGTTGAGCTAAT
JMFS021F06+ ACATTGGCAGCAGACATGGCTTCTACCCTAAAAGCTTCTTCAGCAGCCTGTTGAGCTAAT
JMSF023A11+ ACATTGGCAGCAGACATGGCTTCTACCCTAAAAGCTTCTTCAGCAGCCTGTTGAGCTAAT
JMSF031L01+ ACATTGGCAGCAGACATGGCTTCTACCCTAAAAGCTTCTTCAGCAGCCTGTTGAGCTAAT
____________________________________________________________
consensus ACATTGGCAGCAGACATGGCTTCTACCCTAAAAGCTTCTTCAGCAGCCTGTTGAGCTAAT
. : . : . : . : . : . :
JMFS054B11+ ACACTTGCCCTCCCTTTCTTTTTTGCAGCCTCATTCCATTTTCCTAGGAAGATGTAAATA
JMFS146B06+ ACACTTGCCCTCCCTTTCTTTTTTGCAGCCTCATTCCATTTTCCTAGGAAGATGTAAATA
JMFS021F06+ ACACTTGCCCTCCCTTTCTTTTTTGCAGCCTCATTCCATTTTCCTAGGAAGATGTAAATA
JMSF023A11+ ACACTTGCCCTCCCTTTCTTTTTTGCAGCCCCATTCCATTTTCCTAGGAAGATGTAAATA
JMSF031L01+ ACACTTGCCCTCCCTTCCTTTTTTGCAGCCTCATTCCATTTTCCTAGGAAGATGTAAATA
____________________________________________________________
consensus ACACTTGCCCTCCCTTTCTTTTTTGCAGCCTCATTCCATTTTCCTAGGAAGATGTAAATA
. : . : . : . : . : . :
JMFS054B11+ ACAAGCGGAAGCACAACTAGGAACAAAAACAGAGCAAGAACATCGGTTTCACTTGGCTGG
JMFS146B06+ ACAAGCGGAAGCACAACTAGGAACAAAAACAGAGCAAGAACATCGGTTTCACTTGGCTGG
JMFS021F06+ ACAAGCGGAAGCACAACTAGGAACAAAAACAGAGCAAGAACATCGGTTTCACTTGGCTGG
JMSF023A11+ ACAAGCGGAAGCACAACTAGGAACAAAAACAGAGCAAGAACATCGGTTTCACTTGGCTGG
JMSF031L01+ ACAAGCGGAAGCACAACTAGGAACAAAAACAGAGCAAGAACATCGGTTTCACTTGGCTGG
____________________________________________________________
consensus ACAAGCGGAAGCACAACTAGGAACAAAAACAGAGCAAGAACATCGGTTTCACTTGGCTGG
. : . : . : . : . : . :
JMFS054B11+ AGCATGATCCCACCAGAAAACTCATGTCCAATTTGCCGAAACTCCTCCTTGAGAACACTG
JMFS146B06+ AGCATGATCCCACCAGAAAACTCATGTCCAATTTGCCGAAACTCCTCCTTGAGAACACTG
JMFS021F06+ AGCATGATCCCACCAGAAAACTCATGTCCAATTTGCCGAAACTCCTCCTTGAGAACACTG
JMSF023A11+ AGCATGATCCCACCAGAAAACTCATGTCCAATTTGCCGAAACTCCTCCTTGAGAACACTG
JMSF031L01+ AGCATGATCCCACCAGAAAACTCATGTCCAATTTGCCGAAACTCCTCCTTGAGAACACTG
____________________________________________________________
consensus AGCATGATCCCACCAGAAAACTCATGTCCAATTTGCCGAAACTCCTCCTTGAGAACACTG
. : . : . : . : . : . :
JMFS054B11+ ATCACCTTTAGCTTTCTGCATAAGAGGCAAATCAGGAGAATAACACCCTTGGTCTCTTTT
JMFS146B06+ ATCACCTTTAGCTTTCTGCATAAGAGGCAAATCAGGAGAATAACACCCTTGGTCTCTTTT
JMFS021F06+ ATCACCTTTAGCTTTCTGCATAAGAGGCAAATCAGGAGAATAACACCCTTGGTCTCTTTT
JMSF023A11+ ATCACCTTTAGCTTTCTGCATAAGAGGCAAATCAGGAGAATAACACCCTTGGTCTCTTTT
JMSF031L01+ ATCACCTTTAGCTTTCTGCATAAGAGGCAAATCAGGAGAATAACACCCTTGGTCTCTTTT
____________________________________________________________
consensus ATCACCTTTAGCTTTCTGCATAAGAGGCAAATCAGGAGAATAACACCCTTGGTCTCTTTT
. : . : . : . : . : . :
JMFS054B11+ GCAGCTCCTGGTTCTTCTCTTGTTAGCTCGGAAAGATACTTTTATTCCTCAAATGGTAAG
JMFS146B06+ GCAGCTCCTGGTTCTTCTCTTGTTAGCTCGGAAAGATACTTTTATTCCTCAAATGGTAAG
JMFS021F06+ GCAGCTCCTGGTTCTTCTCTTGTTAGCTCGGAAAGATACTTTTATTCCTCAAA
JMSF023A11+ GCAGCTCCTGGTTCTTCTCTTGTTAGCTCGGAAAGATACTTTTATTCCTCAAATGGTAAG
JMSF031L01+ GCAGCTCCTGGTTCTTCTCTTGTTAGCTCGGAAAGATACTTTTATTCCTCAAATGGTAAG
____________________________________________________________
consensus GCAGCTCCTGGTTCTTCTCTTGTTAGCTCGGAAAGATACTTTTATTCCTCAAATGGTAAG
. : . : . : . : . : . :
JMFS054B11+ AAATCCACCGCTTCTGCTC
JMFS146B06+ AAATCCACCGCTTCTGCTC
JMSF023A11+ AAATCCACCGCTTCTGCTCTCCATTGGCCTGCCTGGCTTC
JMSF031L01+ AAATCCACCGCTTCTGCTCTCCATTGGCCTGCCTGGCTTCACAAAATGCCTCCCTTCTTC
____________________________________________________________
consensus AAATCCACCGCTTCTGCTCTCCATTGGCCTGCCTGGCTTCACAAAATGCCTCCCTTCTTC
. : . : . : . : . : . :
JMSF031L01+ TCACTACTCGTTTGCACTTTAAGATTGGGGAATACTCGTCTGTGCTCACTCCACACTCTC
____________________________________________________________
consensus TCACTACTCGTTTGCACTTTAAGATTGGGGAATACTCGTCTGTGCTCACTCCACACTCTC