Contig 007933:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF017K15Sequence608007933 (4)781001092 (2)ref|XP_006338564.1|2e-49PREDICTED: serine/threonine-protein kinase BLUS1-like isoform X1 [Solanum tuber
JMFS152D08Sequence483007933 (4)
JMFS168H03Sequence620007933 (4)
JMSF029O07Sequence611007933 (4)730001092 (2)ref|XP_006338564.1|4e-44PREDICTED: serine/threonine-protein kinase BLUS1-like isoform X1 [Solanum tuber

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS168H03+ TATGACATAACATAANAATGCCCTTTNTGCCCTAAGCTCTCAAAGAAGA
JMFF017K15+ CAAAGAAGA
JMSF029O07+ CAAAGAAGA
                      ____________________________________________________________
consensus TATGACATAACATAANAATGCCCTTTNTGCCCTAAGCTCTCAAAGAAGA
 
. : . : . : . : . : . :
JMFS168H03+ TAAAAAGGATGTTGGAAAGATCCAAAATTGTATGACATTTCTTTTTATGATATACCATTT
JMFF017K15+ TAAAAAGGATGTTGGAAAGATCCAAAATTGTATGACATTTCTTTTTATGATATACCATTT
JMSF029O07+ TAAAAAGGATGTTGGAAAGATCCAAAATTGTATGACATTTCTTTTTATGATATACCATTT
                      ____________________________________________________________
consensus TAAAAAGGATGTTGGAAAGATCCAAAATTGTATGACATTTCTTTTTATGATATACCATTT
 
. : . : . : . : . : . :
JMFS152D08+ AATCCAGCTACTTCATAGGATTAATTTTCAACCAAT
JMFS168H03+ TCCTTCTGATCTACACAGTATTTGAATCCAGCTACTTCATAGGATTAATTTTCAACCAAT
JMFF017K15+ TCCTTCTGATCTACACAGTATTTGAATCCAGCTACTTCATAGGATTAATTTTCAACCAAT
JMSF029O07+ TCCTTCTGATCTACACAGTATTTGAATCCAGCTACTTCATAGGATTAATTTTCAACCAAT
                      ____________________________________________________________
consensus TCCTTCTGATCTACACAGTATTTGAATCCAGCTACTTCATAGGATTAATTTTCAACCAAT
 
. : . : . : . : . : . :
JMFS152D08+ ATCACCAACTACAACAATTACTGACTAGAAAGTCACCCAAGCTGAGCGAACTGTGATTAG
JMFS168H03+ ATCACCAACTACAACAATTACTGACTAGAAAGTCACCCAAGCTGAGCGAACTGTGATTAG
JMFF017K15+ ATCACCAACTACAACAATTACTGACTAGAAAGTCACCCAAGCTGAGCGAACTGTGATTAG
JMSF029O07+ ATCACCAACTACAACAATTACTGACTAGAAAGTCACCCAAGCTGAGCGAACTGTGATTAG
                      ____________________________________________________________
consensus ATCACCAACTACAACAATTACTGACTAGAAAGTCACCCAAGCTGAGCGAACTGTGATTAG
 
. : . : . : . : . : . :
JMFS152D08+ CACCAAGTAACTTAAGAGGCCACTGCTAAACACTCTTTTGCCAATGCTTCAACAATACAC
JMFS168H03+ CACCAAGTAACTTAAGAGGCCACTGCTAAACACTCTTTTGCCAATGCTTCAACAATACAC
JMFF017K15+ CACCAAGTAACTTAAGAGGCCACTGCTAAACACTCTTTTGCCAATGCTTCAACAATACAC
JMSF029O07+ CACCAAGTAACTTAAGAGGCCACTGCTAAACACTCTTTTGCCAATGCTTCAACAATACAC
                      ____________________________________________________________
consensus CACCAAGTAACTTAAGAGGCCACTGCTAAACACTCTTTTGCCAATGCTTCAACAATACAC
 
. : . : . : . : . : . :
JMFS152D08+ TTATATATGAGTGAGTCCAATCAGATTCCAGCCAGTATCTTCCAAGAAAAAGTACACCAG
JMFS168H03+ TTATATATGAGTGAGTCCAATCAGATTCCAGCCAGTATCTTCCAAGAAAAAGTACACCAG
JMFF017K15+ TTATATATGAGTGAGTCCAATCAGATTCCAGCCAGTATCTTCCAAGAAAAAGTACACCAG
JMSF029O07+ TTATATATGAGTGAGTCCAATCAGATTCCAGCCAGTATCTTCCAAGAAAAAGTACACCAG
                      ____________________________________________________________
consensus TTATATATGAGTGAGTCCAATCAGATTCCAGCCAGTATCTTCCAAGAAAAAGTACACCAG
 
. : . : . : . : . : . :
JMFS152D08+ TGTCCAATGGAGCTTAGTCACAGTGAAGATCAGACCATTCAGAAAATATGATAAAGCAAT
JMFS168H03+ TGTCCAATGGAGCTTAGTCACAGTGAAGATCAGACCATTCAGAAAATATGATAAAGCAAT
JMFF017K15+ TGTCCAATGGAGCTTAGTCACAGTGAAGATCAGACCATTCAGAAAATATGATAAAGCAAT
JMSF029O07+ TGTCCAATGGAGCTTAGTCACAGTGAAGATCAGACCATTCAGAAAATATGATAAAGCAAT
                      ____________________________________________________________
consensus TGTCCAATGGAGCTTAGTCACAGTGAAGATCAGACCATTCAGAAAATATGATAAAGCAAT
 
. : . : . : . : . : . :
JMFS152D08+ ACTGCATATATGATATATGTGATTCACATGTATTCACAAATAGTATCTTCTGCCTCTGTG
JMFS168H03+ ACTGCATATATGATATATGTGATTCACATGTATTCACAAATAGTATCTTCTGCCTCTGTG
JMFF017K15+ ACTGCATATATGATATATGTGATTCACATGTATTCACAAATAGTATCTTCTGCCTCTGTG
JMSF029O07+ ACTGCATATATGATATATGTGATTCACATGTATTCACAAATAGTATCTTCTGCCTCTGTG
                      ____________________________________________________________
consensus ACTGCATATATGATATATGTGATTCACATGTATTCACAAATAGTATCTTCTGCCTCTGTG
 
. : . : . : . : . : . :
JMFS152D08+ TGTGTTTGTACTGCGGAGAATACTAAATAGGTATAGATAGATCGTTAGATAGATGTTGAG
JMFS168H03+ TGTGTTTGTACTGCGGAGAATACTAAATAGGTATAGATAGATCGTTAGATAGATGTTGAG
JMFF017K15+ TGTGTTTGTACTGCGGAGAATACTAAATAGGTATAGATAGATCGTTAGATAGATGTTGAG
JMSF029O07+ TGTGTTTGTACTGCGGAGAATACTAAATAGGTATAGATAGATCGTTAGATAGATGTTGAG
                      ____________________________________________________________
consensus TGTGTTTGTACTGCGGAGAATACTAAATAGGTATAGATAGATCGTTAGATAGATGTTGAG
 
. : . : . : . : . : . :
JMFS152D08+ TGGATTTGTACGTAGCTCAAGCAATCGGAGTACGGAATAGAGTACGGTATGGAGTACGGA
JMFS168H03+ TGGATTTGTACGTAGCTCAAGCAATCGGAGTACGGAATAGAGTACGGTATGGAGTACGGA
JMFF017K15+ TGGATTTGTACGTAGCTCAAGCAATCGGAGTACGGAATAGAGTACGGTATGGAGTACGGA
JMSF029O07+ TGGATTTGTACGTAGCTCAAGCAATCGGAGTACGGAATAGAGTACGGTATGGAGTACGGA
                      ____________________________________________________________
consensus TGGATTTGTACGTAGCTCAAGCAATCGGAGTACGGAATAGAGTACGGTATGGAGTACGGA
 
. : . : . : . : . : . :
JMFS152D08+ CCTAGGGTTTC
JMFS168H03+ CCTAGGGTTTCGAGACCAGAGAAAACGCTAA
JMFF017K15+ CCTAGGGTTTCGAGACCAGAGAAAACGCTAAATAAAGGACTTCGATATGAGCTGAAA
JMSF029O07+ CCTAGGGTTTCGAGACCAGAGAAAACGCTAAATAAAGGACTTCGATATGAGCTGAAATTC
                      ____________________________________________________________
consensus CCTAGGGTTTCGAGACCAGAGAAAACGCTAAATAAAGGACTTCGATATGAGCTGAAATTC