Contig 007930:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF038B16Sequence555007930 (3)ref|XP_009592510.1|1e-39PREDICTED: protein IQ-DOMAIN 1 [Nicotiana tomentosiformis]
JMSF004B20Sequence335007930 (3)ref|XP_009592510.1|4e-19PREDICTED: protein IQ-DOMAIN 1 [Nicotiana tomentosiformis]
JMSF029I05Sequence654007930 (3)ref|XP_009592510.1|2e-44PREDICTED: protein IQ-DOMAIN 1 [Nicotiana tomentosiformis]708019344ref|XP_002265745.2|6e-26PREDICTED: protein IQ-DOMAIN 1 isoform X2 [Vitis vinifera] emb|CBI24440.3| unnam

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF029I05+ TACAAGAGCTTGCATACAGCGGAGAGTGATAGCAGCTTGTTTTCTTACAGCATG
                      ____________________________________________________________
consensus TACAAGAGCTTGCATACAGCGGAGAGTGATAGCAGCTTGTTTTCTTACAGCATG
 
. : . : . : . : . : . :
JMFF038B16+ C
JMSF029I05+ CCCCCTGACTAGTGCTTGAAGTCTCACTAATCCTTTTAAAGCCCGTAGAGCTCGCCTAGC
                      ____________________________________________________________
consensus CCCCCTGACTAGTGCTTGAAGTCTCACTAATCCTTTTAAAGCCCGTAGAGCTCGCCTAGC
 
. : . : . : . : . : . :
JMFF038B16+ CAGAAAACCTCTAAAAGCTGTTTGAATGCGTATGGCTGCCCATTCTTCTCTCATACTCTG
JMSF029I05+ CAGAAATCCTCTAAAAGCTGTTTGAATGCGTATGGCTGCCCATTCTTCTCTCATACTCTG
                      ____________________________________________________________
consensus CAGAAATCCTCTAAAAGCTGTTTGAATGCGTATGGCTGCCCATTCTTCTCTCATACTCTG
 
. : . : . : . : . : . :
JMFF038B16+ TTGAATTTGAGGTGCATCCTCCAATTGGTGTGAGCATGAAGGTGAACCAACAGAAACCGG
JMSF029I05+ TTGAATTTGAGGTGCATCCTCCAATTGGTGTGAGCATGAAGGTGAACCAACAGAAACCGG
                      ____________________________________________________________
consensus TTGAATTTGAGGTGCATCCTCCAATTGGTGTGAGCATGAAGGTGAACCAACAGAAACCGG
 
. : . : . : . : . : . :
JMFF038B16+ AGCTGAAGATACTTTGAAATCTCCAACTGATGTAGAAGCATTATCATTATGACTGAACTC
JMSF029I05+ AGCTGAAGATACTTTGAAATCTCCAACTGATGTAGAAGCATTATCATTATGACTGAACTC
                      ____________________________________________________________
consensus AGCTGAAGATACTTTGAAATCTCCAACTGATGTAGAAGCATTATCATTATGACTGAACTC
 
. : . : . : . : . : . :
JMFF038B16+ ACTCTGAATTAGGTCACTATCAATCTCAACAGAATGCTTTCTCCTATGCCTAGACTTTCT
JMSF029I05+ ACTCTGAATTAGGTCACTATCAATCTCAACAGAATGCTTTCTCCTATGCCTAGACTTTCT
                      ____________________________________________________________
consensus ACTCTGAATTAGGTCACTATCAATCTCAACAGAATGCTTTCTCCTATGCCTAGACTTTCT
 
. : . : . : . : . : . :
JMSF004B20+ TCAGTTGCAAGTGATTTCTCAGGTCTTTTCAA
JMFF038B16+ AGTGCCTGCACTTTTATTTCCATCCTTTTCAGTTGCAAGTGATTTCTCAGGTCTTTTCAA
JMSF029I05+ AGTGCCTGCACTTTTATTTCCATCCTTTTCAGTTGCAAGTGATTTCTCAGGTCTTTTCAA
                      ____________________________________________________________
consensus AGTGCCTGCACTTTTATTTCCATCCTTTTCAGTTGCAAGTGATTTCTCAGGTCTTTTCAA
 
. : . : . : . : . : . :
JMSF004B20+ ACCAATCAGTGACCTAATCCACTTCCCTGAAACTCCCATGGTAAAGTTGCTTCAGCTCTA
JMFF038B16+ ACCAATCAGTGACCTAATCCACTTCCCTGAAACTCCCATGGTAAAGTTGCTTCAGCTCTA
JMSF029I05+ ACCAATCAGTGACCTAATCCACTTCCCTGAAACTCCCATGGTAAAGTTGCTTCAGCTCTA
                      ____________________________________________________________
consensus ACCAATCAGTGACCTAATCCACTTCCCTGAAACTCCCATGGTAAAGTTGCTTCAGCTCTA
 
. : . : . : . : . : . :
JMSF004B20+ CCAACCTCAAACCTTA
JMFF038B16+ CCAACCTCAAACCTTATTGTCGGTTGAGTAGACCGATCGATCAGCCAATGATCTAGTCAG
JMSF029I05+ CCAACCTCAAACCTTATTGTCGGTTGAGTAGACCGATCGATCAGCCAATGATCTAGTCAG
                      ____________________________________________________________
consensus CCAACCTCAAACCTTATTGTCGGTTGAGTAGACCGATCGATCAGCCAATGATCTAGTCAG
 
. : . : . : . : . : . :
JMFF038B16+ GGGAAAGTCAAATCTGGAGTTAACCCAGTTCTCATTTTTCCGGCAATCGGATTTAGTAGA
JMSF029I05+ GGGAAAGTCAAATCTGGAGTTAACCCAGTTCTCATTTTTCCGGCAATCGGATTTAGTAGA
                      ____________________________________________________________
consensus GGGAAAGTCAAATCTGGAGTTAACCCAGTTCTCATTTTTCCGGCAATCGGATTTAGTAGA
 
. : . : . : . : . : . :
JMFF038B16+ ATTGAGATGATTCAGAGGTGAAATCGGAGGATTTTTCTTAGCTTCTTGATAGGAACTTC
JMSF029I05+ ATTGAGATGATTCAGAGGTGAAATCGGAGGATTTTTCTTAGCTTCTTGATAGGAACTTCC
                      ____________________________________________________________
consensus ATTGAGATGATTCAGAGGTGAAATCGGAGGATTTTTCTTAGCTTCTTGATAGGAACTTCC