Contig 007927:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011K07Sequence528007927 (7)ref|XP_009610406.1|6e-58PREDICTED: probable acyl-activating enzyme 17, peroxisomal [Nicotiana tomentosi615008205 (7)ref|XP_010314208.1|9e-81PREDICTED: probable acyl-activating enzyme 17, peroxisomal isoform X2 [Solanum
JMFF017P16Sequence559007927 (7)ref|XP_009610406.1|2e-73PREDICTED: probable acyl-activating enzyme 17, peroxisomal [Nicotiana tomentosi769008205 (7)ref|XP_009610406.1|2e-105PREDICTED: probable acyl-activating enzyme 17, peroxisomal [Nicotiana tomentosi
JMFF022E10Sequence548007927 (7)ref|XP_009610406.1|2e-61PREDICTED: probable acyl-activating enzyme 17, peroxisomal [Nicotiana tomentosi752008205 (7)ref|XP_010314208.1|1e-100PREDICTED: probable acyl-activating enzyme 17, peroxisomal isoform X2 [Solanum
JMFF032G14Sequence486007927 (7)emb|CAN62077.1|1e-49hypothetical protein VITISV_015539 [Vitis vinifera]637008205 (7)ref|XP_010314208.1|7e-86PREDICTED: probable acyl-activating enzyme 17, peroxisomal isoform X2 [Solanum
JMFS011A06Sequence635007927 (7)ref|XP_009787950.1|5e-89PREDICTED: probable acyl-activating enzyme 17, peroxisomal [Nicotiana sylvestri
JMSF029C08Sequence657007927 (7)emb|CAN62077.1|5e-68hypothetical protein VITISV_015539 [Vitis vinifera]696008205 (7)ref|XP_009610406.1|9e-91PREDICTED: probable acyl-activating enzyme 17, peroxisomal [Nicotiana tomentosi
JMSF046F18Sequence796007927 (7)ref|XP_009787950.1|2e-117PREDICTED: probable acyl-activating enzyme 17, peroxisomal [Nicotiana sylvestri679008205 (7)ref|XP_010314208.1|6e-54PREDICTED: probable acyl-activating enzyme 17, peroxisomal isoform X2 [Solanum

Alignment

This contig is upended


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JMSF046F18+ TATCAGCAATTGA
                      ____________________________________________________________
consensus TATCAGCAATTGA
 
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JMSF046F18+ CACAACTACATAGCCAGCAAGANCAATAGCCAAGTATACCACCACAGAATAGACATTCAT
                      ____________________________________________________________
consensus CACAACTACATAGCCAGCAAGANCAATAGCCAAGTATACCACCACAGAATAGACATTCAT
 
. : . : . : . : . : . :
JMFS011A06+ CTTTACTCAATCCCAATGTGTCAAGAGAATGTGC
JMSF046F18+ AGGCATATCGATTGCAATAGCAGAACCTTTACTCAATCCCAATGTTTCAAGAGAATGTGC
                      ____________________________________________________________
consensus AGGCATATCGATTGCAATAGCAGAACCTTTACTCAATCCCAATGTTTCAAGAGAATGTGC
 
. : . : . : . : . : . :
JMFS011A06+ AACAGCCCAAACCTCTGAACGTAGCTCCTTAAGAGTCATTTTTTCAACAGGTGCTTCATC
JMSF046F18+ AACAGCCCAAACCTCTGAACGTAGCTCCTTAAGAGTCATTTTTTCAACAGGTGCTTCATC
                      ____________________________________________________________
consensus AACAGCCCAAACCTCTGAACGTAGCTCCTTAAGAGTCATTTTTTCAACAGGTGCTTCATC
 
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JMFS011A06+ ATCTCCTTCATTACGCCATATAAGAACTATATCATTTAAATTCCTGTCTCTATTTGGACT
JMFF017P16+ CTGTCTCTATTTGGACT
JMSF046F18+ ATCTCCTTCATTACGCCATATAAGAACTATATCATTTAAATTCCTGTCTCTATTTGGACT
JMSF029C08+ CTCCTTCATTACGCCATATAAGAACTATATCATTTAAATTCCTGTCTCTATTTGGACT
                      ____________________________________________________________
consensus ATCTCCTTCATTACGCCATATAAGAACTATATCATTTAAATTCCTGTCTCTATTTGGACT
 
. : . : . : . : . : . :
JMFS011A06+ GAGACAATGCCTTGCAGGATTCAAGTGTGCCCCAGGAAGCCATTGTCCACCTGGATGAGA
JMFF017P16+ GAGACAATGCCTTGCAGGATTCAAGTGTGCCCCAGGAAGCCATTGTCCACCTGGATGAGA
JMSF046F18+ GAGACAATGCCTTGCAGGATTCAAGTGTGCCCCAGGAAGCCATTGTCCACCTGGATGAGA
JMFF022E10+ TGGATGAGA
JMSF029C08+ GAGACAATGCCTTGCAGGATTCAAGTGTGCCCCAGGAAGCCATTGTCCACCTGGATGAGA
                      ____________________________________________________________
consensus GAGACAATGCCTTGCAGGATTCAAGTGTGCCCCAGGAAGCCATTGTCCACCTGGATGAGA
 
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JMFS011A06+ CTGATCCTCACGTAAAATACATTCAGGCAGAATTGAAAATGAAACATTCATCTCATCCAA
JMFF017P16+ CTGATCCTCACGTAAAATACATTCAGGCAGAATTGAAAATGAAACATTCATCTCATCCAA
JMSF046F18+ CTGATCCTCACGTAAAATACATTCAGGCAGAATTGAAAATGAAACATTCATCTCATCCAA
JMFF011K07+ GTAAAATACATTCAGGCAGAATTGAAAATGAAACATTCATCTCATCCAA
JMFF032G14+ CATCCAA
JMFF022E10+ CTGATCCTCACGTAAAATACATTCAGGCAGAATTGAAAATGAAACATTCATCTCATCCAA
JMSF029C08+ CTGATCCTCACGTAAAATACATTCAGGCAGAATTGAAAATGAAACATTCATCTCATCCAA
                      ____________________________________________________________
consensus CTGATCCTCACGTAAAATACATTCAGGCAGAATTGAAAATGAAACATTCATCTCATCCAA
 
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JMFS011A06+ CACAGTTTTCCAGTAGACCTCTGGGTTTGAAACAGAAAACTTCTGAAAATCAGAAAAGCT
JMFF017P16+ CACAGTTTTCCAGTAGACCTCTGGGTTTGAAACAGAAAACTTCTGAAAATCAGAAAAGCT
JMSF046F18+ CACAGTTTTCCAGTAGACCTCTGGGTTTGAAACAGAAAACTTCTGAAAATCAGAAAAGCT
JMFF011K07+ CACAGTTTTCCAGTAGACCTCTGGGTTTGAAACAGAAAACTTCTGAAAATCAGAAAAGCT
JMFF032G14+ CACAGTTTTCCAGTAGACCTCTGGGTTTGAAACAGAAAACTTCTGAAAATCAGAAAAGCT
JMFF022E10+ CACAGTTTTCCAGTAGACCTCTGGGTTTGAAACAGAAAACTTCTGAAAATCAGAAAAGCT
JMSF029C08+ CACAGTTTTCCAGTAGACCTCTGGGTTTGAAACAGAAAACTTCTGAAAATCAGAAAAGCT
                      ____________________________________________________________
consensus CACAGTTTTCCAGTAGACCTCTGGGTTTGAAACAGAAAACTTCTGAAAATCAGAAAAGCT
 
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JMFS011A06+ TGAGATTGGGTCTTTATATTTTGACCCCAACAACTCCTTTCCCCGCTTCTCTAGTAACTT
JMFF017P16+ TGAGATTGGGTCTTTATATTTTGACCCCAACAACTCCTTTCCCCGCTTCTCTAGTAACTT
JMSF046F18+ TGAGATTGGGTCTTTATATTTTGACCCCAACAACTCCTTTCCCCGCTTCTCTAGTAACTT
JMFF011K07+ TGAGATTGGGTCTTTATATTTTGACCCCAACAACTCCTTTCCCCGCTTCTCTAGTAACTT
JMFF032G14+ TGAGATTGGGTCTTTATATTTTGACCCCAACAACTCCTTTCCCCGCTTCTCTAGTAACTT
JMFF022E10+ TGAGATTGGGTCTTTATATTTTGACCCCAACAACTCCTTTCCCCGCTTCTCTAGTAACTT
JMSF029C08+ TGAGATTGGGTCTTTATATTTTGACCCCAACAACTCCTTTCCCCGCTTCTCTAGTAACTT
                      ____________________________________________________________
consensus TGAGATTGGGTCTTTATATTTTGACCCCAACAACTCCTTTCCCCGCTTCTCTAGTAACTT
 
. : . : . : . : . : . :
JMFS011A06+ GCCAACATTAGTCAGCATTGCACTACCCGGGTCGGGTAACCAAGCGGGAGGGTCCGGTCC
JMFF017P16+ GCCAACATTAGTCAGCATTGCACTACCCGGGTCGGGTAACCAAGCGGGAGGGTCCGGTCC
JMSF046F18+ GCCAACATTAGTCAGCATTGCACTACCCGGGTCGGGTAACCAAGCGGGAGGGTCCGGTCC
JMFF011K07+ GCCAACATTAGTCAGCATTGCACTACCCGGGTCGGGTAACCAAGCGGGAGGGTCCGGTCC
JMFF032G14+ GCCAACATTAGTCAGCATTGCACTACCCGGGTCGGGTAACCAAGCGGGAGGGTCCGGTCC
JMFF022E10+ GCCAACATTAGTCAGCATTGCACTACCCGGGTCGGGTAACCAAGCGGGAGGGTCCGGTCC
JMSF029C08+ GCCAACATTAGTCAGCATTGCACTACCCGGGTCGGGTAACCAAGCGGGAGGGTCCGGTCC
                      ____________________________________________________________
consensus GCCAACATTAGTCAGCATTGCACTACCCGGGTCGGGTAACCAAGCGGGAGGGTCCGGTCC
 
. : . : . : . : . : . :
JMFS011A06+ GAAATCCTTGTAGCAGCCGTAATACATCATCTGATGCAAAGAGAAAGGAAGGTGAGGGGC
JMFF017P16+ GAAATCCTTGTAGCAGCCGTAATACATCATCTGATGCAAAGAGAAAGGAAGGTGAGGGGC
JMSF046F18+ GAAATCCTTGTAGCAGCCGTAATACATCATCTGATGCAAAGAGAAAGGAAGGTGAGGGGC
JMFF011K07+ GAAATCCTTGTAGCAGCCGTAATACATCATCTGATGCAAAGAGAAAGGAAGGTGAGGGGC
JMFF032G14+ GAAATCCTTGTAGCAGCCGTAATACATCATCTGATGCAAAGAGAAAGGAAGGTGAGGGGC
JMFF022E10+ GAAATCCTTGTAGCAGCCGTAATACATCATCTGATGCAAAGAGAAAGGAAGGTGAGGGGC
JMSF029C08+ GAAATCCTTGTAGCAGCCGTAATACATCATCTGATGCAAAGAGAAAGGAAGGTGAGGGGC
                      ____________________________________________________________
consensus GAAATCCTTGTAGCAGCCGTAATACATCATCTGATGCAAAGAGAAAGGAAGGTGAGGGGC
 
. : . : . : . : . : . :
JMFS011A06+ GAGCACGTCTTGGGAGATTCGCTGCCATGTCTGGGGAGTGGCAGCGCCGCAATCACTCAC
JMFF017P16+ GAGCACGTCTTGGGAGATTCGCTGCCATGTCTGGGGAGTGGCAGCGCCGCAATCACTCAC
JMSF046F18+ GAGCACGTCTTGGGAGATTCGCTGCCATGTCTGGGGAGTGGCAGCGCCGCAATCACTCAC
JMFF011K07+ GAGCACGTCTTGGGAGATTCGCTGCCATGTCTGGGGAGTGGCAGCGCCGCAATCACTCAC
JMFF032G14+ GAGCACGTCTTGGGAGATTCGCTGCCATGTCTGGGGAGTGGCAGCGCCGCAATCACTCAC
JMFF022E10+ GAGCACGTCTTGGGAGATTCGCTGCCATGTCTGGGGAGTGGCAGCGCCGCAATCACTCAC
JMSF029C08+ GAGCACGTCTTGGGAGATTCGCTGCCATGTCTGGGGAGTGGCAGCGCCGCAATCACTCAC
                      ____________________________________________________________
consensus GAGCACGTCTTGGGAGATTCGCTGCCATGTCTGGGGAGTGGCAGCGCCGCAATCACTCAC
 
. : . : . : . : . : . :
JMFS011A06+ GATTCCGGCGAGCTTCTGGAGAAGATCGACGGCGACTCCGGTGTCCACTCCGAGAGCTTC
JMFF017P16+ GATTCCGGCGAGCTTCTGGAGAAGATCGACGGCGACTCCGGTGTCCACTCCGAGAGCTTC
JMSF046F18+ GATTCCGGCGAGCTTCTGGAGAAGATCGACGGCGACTCCGGTGTCCACTCCGAGAGCTTC
JMFF011K07+ GATTCCGGCGAGCTTCTGGAGAAGATCGACGGCGACTCCGGTGTCCACTCCGAGAGCTTC
JMFF032G14+ GATTCCGGCGAGCTTCTGGAGAAGATCGACGGCGACTCCGGTGTCCACTCCGAGAGCTTC
JMFF022E10+ GATTCCGGCGAGCTTCTGGAGAAGATCGACGGCGACTCCGGTGTCCACTCCGAGAGCTTC
JMSF029C08+ GATTCCGGCGAGC-TCTGGAGAAGATCGACGGCGACTCCGGTGTCCACTCCGAGAGCTTC
                      ____________________________________________________________
consensus GATTCCGGCGAGCTTCTGGAGAAGATCGACGGCGACTCCGGTGTCCACTCCGAGAGCTTC
 
. : . : . : . : . : . :
JMFS011A06+ G
JMFF017P16+ GATGTCTGAGAGGGTGATTGAAGTGAGGCCCTTGTACTCAACAGCAGCCATTGCGTTCT
JMSF046F18+ GATGTCTGAGAGGGTGATTGAAGTGAGGCCCTTGTACTCAACAGCAGCCATTGCGTTCTG
JMFF011K07+ GATGTCTGAGAGGGTGATTGAAGTGAGGCCCTTGTACTCAACAGCAGCCATTGCGTTCTG
JMFF032G14+ GATGTCTGAGAGGGTGATTGAAGTGAGGCCCTTGTACTCAACAGCAGCCATTGCGTTCTG
JMFF022E10+ GATGTCTGAGAGGGTGATTGAAGTGAGGCCCTTGTACTCAACAGCAGCCATTGCGTTCTG
JMSF029C08+ GATGTCTGAGAGGGTGATTGAAGTGAGGCCCTTGTACTCAACAGCAGCCATTGCGTTCTG
                      ____________________________________________________________
consensus GATGTCTGAGAGGGTGATTGAAGTGAGGCCCTTGTACTCAACAGCAGCCATTGCGTTCTG
 
. : . : . : . : . : . :
JMSF046F18+ GT
JMFF011K07+ GTGTGCATGAATGTTGGAGCATTTAGGCATTTGAGAGATTCAGACAAGGTGATAAGGA
JMFF032G14+ GTGTGCATGAATGTTGGAGCATTTAGGCATTTGAGAGATTCAGACAAGGTGATAAGGA
JMFF022E10+ GTGTGCATGAATGTTGGAGCATTTAGGCATTTGAGAGATTCAGACAAGGTGATAAGGA
JMSF029C08+ GTGTGCATGAATGTTGGAGCATTTAGGCATTTGAGAGATTCAGACAAGGTGATAAGGACC
                      ____________________________________________________________
consensus GTGTGCATGAATGTTGGAGCATTTAGGCATTTGAGAGATTCAGACAAGGTGATAAGGACC