Contig 007900:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF014C24Sequence554007900 (5)ref|XP_009595596.1|77.4PREDICTED: uncharacterized protein LOC104091859 [Nicotiana tomentosiformis]815011012 (6)ref|XP_009763845.1|109PREDICTED: uncharacterized protein LOC104215685 [Nicotiana sylvestris]
JMFF028C22Sequence549007900 (5)ref|XP_009595596.1|75.9PREDICTED: uncharacterized protein LOC104091859 [Nicotiana tomentosiformis]735011012 (6)ref|XP_006344428.1|57.0PREDICTED: uncharacterized protein LOC102597060 [Solanum tuberosum]
JMSF020C14Sequence630007900 (5)ref|XP_009763845.1|105PREDICTED: uncharacterized protein LOC104215685 [Nicotiana sylvestris]794011012 (6)ref|XP_006344428.1|198PREDICTED: uncharacterized protein LOC102597060 [Solanum tuberosum]
JMSF021C14Sequence628007900 (5)ref|XP_009763845.1|111PREDICTED: uncharacterized protein LOC104215685 [Nicotiana sylvestris]717011012 (6)ref|XP_009595596.1|172PREDICTED: uncharacterized protein LOC104091859 [Nicotiana tomentosiformis]
JMSF024N24Sequence674007900 (5)ref|XP_009763845.1|127PREDICTED: uncharacterized protein LOC104215685 [Nicotiana sylvestris]706011012 (6)ref|XP_006344428.1|219PREDICTED: uncharacterized protein LOC102597060 [Solanum tuberosum]

Alignment

This contig is upended


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JMSF024N24+                                                         GGGGATGGTGTACG
                      ____________________________________________________________
consensus                                                           GGGGATGGTGTACG
 
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JMSF020C14+                                         CTGTATAGCGAGAGTGCCACTGGTGGTGTC
JMSF021C14+                                         CTGTATAGCGAGAGTGCCACTGGTGGTGTC
JMSF024N24+           AAGTATTGCCAACCAGTGTTTGAAAATTTTCTGTATAGCGAGAGTGCCACTGGTGGTGTC
                      ____________________________________________________________
consensus             AAGTATTGCCAACCAGTGTTTGAAAATTTTCTGTATAGCGAGAGTGCCACTGGTGGTGTC
 
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JMSF020C14+           AACTGTTTCAGAAGTATAAGAAATGGGAAGATTCTGTGCCCTTGGAGATTCCACTGACGT
JMSF021C14+           AACTGTNTCAGAAGTATAAGAAATGGGAAGATTCTGTGCCCTCGGAGATTCCACTGACGT
JMFF014C24+                                                      GGAGATTCCACTGACGT
JMFF028C22+                                                           TTCCACTGACGT
JMSF024N24+           AACTGTTTCAGAAGTATAAGAAATGGGAAGATTCTGTGCCCTTGGAGATTCCACTGACGT
                      ____________________________________________________________
consensus             AACTGTTTCAGAAGTATAAGAAATGGGAAGATTCTGTGCCCTTGGAGATTCCACTGACGT
 
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JMSF020C14+           TTCCTCACTCCCTTGGGATACAATAGAAAGCTTGATAGATTCCTTCTTGGTCTTTGATCC
JMSF021C14+           TTCCTCACTCCCTTGGGATNCAATAGAAAGCTTGATAGATTCCNTCNTGGTCTTTGATCC
JMFF014C24+           TTCCTCACTCCCTTGGGATACAATAGAAAGCTTGATAGATTCCTTCTTGGTCTTTGATCC
JMFF028C22+           TTCCTCACTCCCTTGGGATACAATAGAAAGCTTGATAGATTCCTTCTTGGTCTTTGATCC
JMSF024N24+           TTCCTCACTCCCTTGGGATACAATAGAAAGCTTGATAGATTCCTTCTTGGTCTTTGATCC
                      ____________________________________________________________
consensus             TTCCTCACTCCCTTGGGATACAATAGAAAGCTTGATAGATTCCTTCTTGGTCTTTGATCC
 
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JMSF020C14+           ACTACTGCCCCCAGAGTTATTTTGGCTACTACTTTTGAAGGCCAAGATCTTCAATACTTT
JMSF021C14+           ACTACTGCCCCCAGAGTTATTTTGGCTACTACTTTTGAAGGCCAAGATCTTCAATACTTT
JMFF014C24+           ACTACTGCCCCCAGAGTTATTTTGGCTACTACTTTTGAAGGCCAAGATCTTCAATACTTT
JMFF028C22+           ACTACTGCCCCCAGAGTTATTTTGGCTACTACTTTTGAAGGCCAAGATCTTCAATACTTT
JMSF024N24+           ACTACTGCCCCCAGAGTTATTTTGGCTACTACTTTTGAAGGCCAAGATCTTCAATACTTT
                      ____________________________________________________________
consensus             ACTACTGCCCCCAGAGTTATTTTGGCTACTACTTTTGAAGGCCAAGATCTTCAATACTTT
 
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JMSF020C14+           GGCTTTTGGTTTAAGGAAAAGAGGAGCTCCTCCACTGCAAACCACATATCTATAAAAGGA
JMSF021C14+           GGCTTTTGGTTTAAGGAAAAGAGGAGCTCCTCCNCTGCAANCCACATATCTATAAAAGGA
JMFF014C24+           GGCTTTTGGTTTAAGGAAAAGAGGAGCTCCTCCACTGCAAACCACATATCTATAAAAGGA
JMFF028C22+           GGCTTTTGGTTTAAGGAAAAGAGGAGCTCCTCCACTGCAAACCACATATCTATAAAAGGA
JMSF024N24+           GGCTTTTGGTTTAAGGAAAAGAGGAGCTCCTCCACTGCAAACCACATATCTATAAAAGGA
                      ____________________________________________________________
consensus             GGCTTTTGGTTTAAGGAAAAGAGGAGCTCCTCCACTGCAAACCACATATCTATAAAAGGA
 
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JMSF020C14+           TCTGCACTTCAATGAGGTAAATTTATCTTTCCTCCCAACATAGCGAACCGTTGTCACAGA
JMSF021C14+           TCTGCACTTCAATGAGGTAAATTTATCTTTCCTCCCAACATAGCGAACCGTTGTCACAGA
JMFF014C24+           TCTGCACTTCAATGAGGTAAATTTATCTTTCCTCCCAACATAGCGAACCGTTGTCACAGA
JMFF028C22+           TCTGCACTTCAATGAGGTAAATTTATCTTTCCTCCCAACATAGCGAACCGTTGTCACAGA
JMSF024N24+           TCTGCACTTCAATGAGGTAAATTTATCTTTCCTCCCAACATAGCGAACCGTTGTCACAGA
                      ____________________________________________________________
consensus             TCTGCACTTCAATGAGGTAAATTTATCTTTCCTCCCAACATAGCGAACCGTTGTCACAGA
 
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JMSF020C14+           ACGTGTCAATTTGTTCCCACTGCTCGACGATGAAGATTGAAAAGGATTTGTTTTATAAGA
JMSF021C14+           ACGTGTCAATTTGTTCCCACTGCTCGACGATGAAGATTGAAAAGGATTTGTTTTATAAGA
JMFF014C24+           ACGTGTCAATTTGTTCCCACTGCTCGACGATGAAGATTGAAAAGGATTTGTTTTATAAGA
JMFF028C22+           ACGTGTCAATTTGTTCCCACTGCTCGACGATGAAGATTGAAAAGGATTTGTTTTATAAGA
JMSF024N24+           ACGTGTCAATTTGTTCCCACTGCTCGACGATGAAGATTGAAAAGGATTTGTTTTATAAGA
                      ____________________________________________________________
consensus             ACGTGTCAATTTGTTCCCACTGCTCGACGATGAAGATTGAAAAGGATTTGTTTTATAAGA
 
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JMSF020C14+           ATGCTGCAAATGAAGGGTTGCCAAAGCCATTGTTTCCGTCCCTATCCGCAATCATTTACC
JMSF021C14+           ATGCTGCAAATGAAGGGTTGCCAAAGCCATTGTTTCCGTCCCTATCCGCAATCATTTACC
JMFF014C24+           ATGCTGCAAATGAAGGGTTGCCAAAGCCATTGTTTCCGTCCCTATCCGCAATCATTTACC
JMFF028C22+           ATGCTGCAAATGAAGGGTTGCCAAAGCCATTGTTTCCGTCCCTATCCGCAATCATTTACC
JMSF024N24+           ATGCTGCAAATGAAGGGTTGCCAAAGCCATTGTTTCCGTCCCTATCCGCAATCATTTACC
                      ____________________________________________________________
consensus             ATGCTGCAAATGAAGGGTTGCCAAAGCCATTGTTTCCGTCCCTATCCGCAATCATTTACC
 
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JMSF020C14+           AAACAAATTCATAACTCCAGCAAAACAGAGGATTCGGAAAGGAGAGGTTTGATGATGATA
JMSF021C14+           AAACAAATTCATAACTCCAGCAAAACAGAGGATTCGGAAAGGAGAGGTTTGATGATGATA
JMFF014C24+           AAACAAATTCATAACTCCAGCAAAACAGAGGATTCGGAAAGGAGAGGTTTGATGATGATA
JMFF028C22+           AAACAAATTCATAACTCCAGCAAAACAGAGGATTCGGAAAGGAGAGGTTTGATGATGATA
JMSF024N24+           AAACAAATTCATAACTCCAGCAAAACAGAGGATTCGGAAAGGAGAGGTTTGATGATGATA
                      ____________________________________________________________
consensus             AAACAAATTCATAACTCCAGCAAAACAGAGGATTCGGAAAGGAGAGGTTTGATGATGATA
 
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JMSF020C14+           GGGTGGGTACGAGGGGGTTTCAATGGATTTTATATGTAGATAGAACTATAGAAGTTGAAG
JMSF021C14+           GGGTGGGTACGAGGGGGTTTCAATGGATTTTATATGTAGATAGAACTATAGAAGTTGAAG
JMFF014C24+           GGGTGGGTACGAGGGGGTTTCAATGGATTTTATATGTAGATAGAACTATAGAAGTTGAAG
JMFF028C22+           GGGTGGGTACGAGGGGGTTTCAATGGATTTTATATGTAGATAGAACTATAGAAGTTGAAG
JMSF024N24+           GGGTGGGTACGAGGGGGTTTCAATGGATTTTATATGTAGATAGAACTATAGAAGTTGAAG
                      ____________________________________________________________
consensus             GGGTGGGTACGAGGGGGTTTCAATGGATTTTATATGTAGATAGAACTATAGAAGTTGAAG
 
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JMSF020C14+           ATTGATTGCTGTACATATTGTGTAGAAGAGCACTTTCTTTATCTCTCTTTAGATAGC   
JMSF021C14+           ATTGATTGCTGTACATATTGTGTAGAAGAGCACTTTCTTTATCTCTCTTTAGATAGC   
JMFF014C24+           ATTGATTGCTGTACATATTGTGTAGAAGAGCACTTTCTTTATCTCTCTTTAGATAGC   
JMFF028C22+           ATTGATTGCTGTACATATTGTGTAGAAGAGCACTTTCTTTATCTCTCTTTAGATAGC   
JMSF024N24+           ATTGATTGCTGTACATATTGTGTAGAAGAGCACTTTCTTTATCTCTCTTTAGATAGCAGC
                      ____________________________________________________________
consensus             ATTGATTGCTGTACATATTGTGTAGAAGAGCACTTTCTTTATCTCTCTTTAGATAGCAGC