Contig 007898:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS142A06+                           GAAAGAAATCAGCGGGAATCGGCCCAGACAGACTGTTATGGCTC
                      ____________________________________________________________
consensus                             GAAAGAAATCAGCGGGAATCGGCCCAGACAGACTGTTATGGCTC
 
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JMFS142A06+           AAGTCCATCACCCTGAGATTAGGAAGCTGGGTAAGACTAACACTTAACCCTCCAGTAAGA
                      ____________________________________________________________
consensus             AAGTCCATCACCCTGAGATTAGGAAGCTGGGTAAGACTAACACTTAACCCTCCAGTAAGA
 
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JMFS142A06+           TTATTCTTAGCCAATGAGAGCTTCCTGAGGAACTGCAATTGAAGAAGCCCTCTGCCTATC
                      ____________________________________________________________
consensus             TTATTCTTAGCCAATGAGAGCTTCCTGAGGAACTGCAATTGAAGAAGCCCTCTGCCTATC
 
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JMFS142A06+           TTCCCAGAAAGCCCAAAATCATCAAGATTAAGCTCAGACACCCTATTGGATCTGGGGTTG
                      ____________________________________________________________
consensus             TTCCCAGAAAGCCCAAAATCATCAAGATTAAGCTCAGACACCCTATTGGATCTGGGGTTG
 
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JMFS142A06+           CATTTCACCCCATCCCAATTGCAAGGACTGTAATCCTCTTCATTCCAAGAAACCAGCTTT
                      ____________________________________________________________
consensus             CATTTCACCCCATCCCAATTGCAAGGACTGTAATCCTCTTCATTCCAAGAAACCAGCTTT
 
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JMFS139G07+                                     GAACACAATGAGCCCCAGAACAGCAGCANACAGC
JMFS142A06+           CCATTTGGATCTTGAATGTCAGACTTGAACACAATCAACCCCAGAACATCATCATTCAGT
                      ____________________________________________________________
consensus             CCATTTGGATCTTGAATGTCAGACTTGAACACAATGAGCCCCAGAACATCATCATTCAGT
 
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JMFS139G07+           GAAGGGCTCAAAGCCCAAACCAAAACAAAAAGACTCAAAANCANNAAGCNCAACACCCCT
JMFS116E01+                                                                 ACCCCT
JMFS142A06+           GAAGGGTTCAAAGCCCTAACCAAAACAAAAAGACTCAAAAACAAAAAGCACAACACCCCT
                      ____________________________________________________________
consensus             GAAGGGTTCAAAGCCCTAACCAAAACAAAAAGACTCAAAAACAAAAAGCACAACACCCCT
 
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JMFS139G07+           CTCATTCCCATTCCCCCCACCTCAATACATCCAAAAACAACACACTCTAACTTATATTTC
JMFS116E01+           CTCATTCCCATTCCCCCCACCTCAATACATCCAAAAACAACACACTCTAACTTATATTTC
JMFS142A06+           CTCATTCCCATTCCCCCCACCTCAATACATCCAAAAACAACACACTCTAACTTATATTTC
                      ____________________________________________________________
consensus             CTCATTCCCATTCCCCCCACCTCAATACATCCAAAAACAACACACTCTAACTTATATTTC
 
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JMFS139G07+           CATTACAAAGGCTCAGAAACCTTAACAACACACTAAAGCCAGACATGAATGCAAGCCGTA
JMFS116E01+           CATTACAAAGGCTCAGAAACCTTAACAACACACTAAAGCCAGACATGAATGCAAGCCGTA
JMFS142A06+           CATTACAAAGGCTCAGAAACCTTAACAACACACTAAAGCCAGACATGAATGCAAGCCGTA
JMFS025E08+                                                    GACATGAATGCAAGCCGTA
JMFS080B03+                                                 CCAGACATGAATGCAAGCCGTA
                      ____________________________________________________________
consensus             CATTACAAAGGCTCAGAAACCTTAACAACACACTAAAGCCAGACATGAATGCAAGCCGTA
 
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JMFS139G07+           CATTTGGTTGGAAAGAAATATAAAGTGATTAGAACATTATT                   
JMFS116E01+           CATTTGGTTGGAAAGAAATATAAAGTGATTAGAACATTATTTGGGTCTCGAGGTAATAAC
JMFS142A06+           CATTTGGTTGGAAAGAAATATAAAGTGATTAGAACATTATTTGGGTCTCGAGGTAATAAC
JMFS025E08+           CATTTGGTTGGAAAGAAATATAAAGTGATTAGAACATTATTTGGGTCTCGAGGTAATAAC
JMFS080B03+           CATTTGGTTGGAAAGAAATATAAAGTGATTAGAACATTATTTGGGTCTCGAGGTAATAAC
                      ____________________________________________________________
consensus             CATTTGGTTGGAAAGAAATATAAAGTGATTAGAACATTATTTGGGTCTCGAGGTAATAAC
 
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JMFS116E01+           GA                                                          
JMFS142A06+           GA                                                          
JMFS025E08+           GACAACTACAGCTAGGAGAAACAAGAATAGACAAGAAACAAATTCCTAGAGATGAAATGA
JMFS080B03+           GACAACTACAGCTAGGAGAAACAAGAATAGACAAGAAACAAATTCCTAGAGATGAAATGA
                      ____________________________________________________________
consensus             GACAACTACAGCTAGGAGAAACAAGAATAGACAAGAAACAAATTCCTAGAGATGAAATGA
 
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JMFS025E08+           CTTGTTTTTGAACTCTTTCTAGCCAGGAAAAATTTGACATTAACGGCTAGAAATTCCGAC
JMFS080B03+           CTTGTTTTTGAACTCTTTCTAGCCAGGAAAAATTTGACATTAACGGCTAGAAATTCCGAC
                      ____________________________________________________________
consensus             CTTGTTTTTGAACTCTTTCTAGCCAGGAAAAATTTGACATTAACGGCTAGAAATTCCGAC
 
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JMFS025E08+           CAAACAGCAGCTACGAGAAAACCCAGAGCAGGAAACTACAAACAAACGCAATAAACTACC
JMFS080B03+           CAAACAGCAGCTACGAGAAAACCCAGAGCAGGAAACTACAAACAAACGCAATAAACTACC
                      ____________________________________________________________
consensus             CAAACAGCAGCTACGAGAAAACCCAGAGCAGGAAACTACAAACAAACGCAATAAACTACC
 
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JMFS025E08+           CACATTGCGAGAAGATAACCCGAGTAAGAAAACGGTTAAGAGAAGGGGGGGGGGGGGGGG
JMFS080B03+           CACATTGCGAGAAGATAACCCGAGTAAGAAAACGGTTAAGAGAAGGGGGGGGGGGGGGGG
JMSF024M19+                                                         GGGGGGGGGGGGGG
                      ____________________________________________________________
consensus             CACATTGCGAGAAGATAACCCGAGTAAGAAAACGGTTAAGAGAAGGGGGGGGGGGGGGGG
 
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JMFS025E08+           AAAGAAAGTGAATTTTCAAATCTGCGAGGAAAAAGGTGAAATTTTGGGAGGAGTTAACGG
JMFS080B03+           AAAGAAAGTGAATTTTCAAATCTGCGAGGAAAAAGGTGAAATTTTGGGAGGAGTTAACGG
JMSF024M19+           AAAGAAAGTGAATTTTCAAATCTGCGAGGAAAAAGGTGAAATTTTGGGAGGAGTTAACGG
                      ____________________________________________________________
consensus             AAAGAAAGTGAATTTTCAAATCTGCGAGGAAAAAGGTGAAATTTTGGGAGGAGTTAACGG
 
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JMFS025E08+           GGAAAACGAGCTGAAAGAGTGGAAAAGAACCTCTAAATCTCCCAACAAGAGAGTTGATTT
JMFS080B03+           GGAAAACGAGCTGAAAGAGTGGAAAAGAACCTCTAAATCTCCCAACAAGAGAGTTGATTT
JMSF024M19+           GGAAAACGAGCTGAAAGAGTGGAAAAGAACCTCTAAATCTCCCAACAAGAGAGTTGATTT
                      ____________________________________________________________
consensus             GGAAAACGAGCTGAAAGAGTGGAAAAGAACCTCTAAATCTCCCAACAAGAGAGTTGATTT
 
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JMFS025E08+           GAAGGTGGGTTGGTGTTTACAGAGAAGGAAAGAACGAGAAGCGAGCTAGCTCGGTTGAAA
JMFS080B03+           GAAGGTGGGTTGGTGTTTACAGAGAAGGAAAGAACGAGAAGCGAGCTAGCTCGGTTGAAA
JMSF024M19+           GAAGGTGGGTTGGTGTTTACAGAGAAGGAAAGAACGAGAAGCGAGCTAGCTCGGTTGAAA
                      ____________________________________________________________
consensus             GAAGGTGGGTTGGTGTTTACAGAGAAGGAAAGAACGAGAAGCGAGCTAGCTCGGTTGAAA
 
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JMFS025E08+           TTTCGCAGGAAAAGAGCCCCACCGGCGGCGGCGGTGGAGAAAGAAGAGAGAGGGAGTGGG
JMFS080B03+           TTTCGCAGGAAAAGAGCCCCACCGGCGGCGGCGGTGGAGAAAGAAGAGAGAGGGAGTGGG
JMSF024M19+           TTTCGCAGGAAAAGAGCCCCACCGGCGGCGGCGGTGGAGAAAGAAGAGAGAGGGAGTGGG
                      ____________________________________________________________
consensus             TTTCGCAGGAAAAGAGCCCCACCGGCGGCGGCGGTGGAGAAAGAAGAGAGAGGGAGTGGG
 
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JMFS025E08+           CCGGGGAAAGTGAAGGAGAC-AAAAAACCGCCGGAAAAAGCTAAAGGA            
JMFS080B03+           CCGGGGAAAGTGAAGGAGACAAAAAAA-CGCCGGAAAAAGCTAAAGGAGGTTTGGTGAAT
JMSF024M19+           CCGGGGAAAGTGAAGGAGACAAAAAAACCGCCGGAAAAAGCTAAAGGAGGTTTGGTGAAT
                      ____________________________________________________________
consensus             CCGGGGAAAGTGAAGGAGACAAAAAAACCGCCGGAAAAAGCTAAAGGAGGTTTGGTGAAT
 
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JMFS080B03+           TGG                                                         
JMSF024M19+           TGGCGGTGGTTTCCGGCAAGGTGGTGAGTCAGTGAAGCATTTAAAGCTCTCGTCTCTCCC
                      ____________________________________________________________
consensus             TGGCGGTGGTTTCCGGCAAGGTGGTGAGTCAGTGAAGCATTTAAAGCTCTCGTCTCTCCC