Contig 007896:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN037I15Sequence545007896 (2)ref|XP_009779912.1|223PREDICTED: F-box/kelch-repeat protein At1g23390 [Nicotiana sylvestris]
JMSF024K13Sequence645007896 (2)ref|XP_009779912.1|266PREDICTED: F-box/kelch-repeat protein At1g23390 [Nicotiana sylvestris]740008703 (20)ref|XP_006295105.1|6e-101hypothetical protein CARUB_v10024180mg [Capsella rubella] gb|EOA28003.1| hypothe

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF024K13+ ATCGCCGGCATGGACTCGCACGCNTCCCACGTGCCAGCCCCCACG
                      ____________________________________________________________
consensus ATCGCCGGCATGGACTCGCACGCNTCCCACGTGCCAGCCCCCACG
 
. : . : . : . : . : . :
JMFN037I15+ GTCGCACGTGCCGCCGGCGACGACG
JMSF024K13+ TTGTAAATCTCCACCGCGAGGGGGTCGTCCTCGAAGTCGCACGTGCCGCCGGCGACGACG
                      ____________________________________________________________
consensus TTGTAAATCTCCACCGCGAGGGGGTCGTCCTCGAAGTCGCACGTGCCGCCGGCGACGACG
 
. : . : . : . : . : . :
JMFN037I15+ ATGTAGCCGCCCACGTGCGCCACGATGGGGTCCGTCCGCCACACCTTCGGCGCCTCGACG
JMSF024K13+ ATGTAGCCGCCCACGTGCGCCACGATGGGGTCCGTCCGCCACACCTTCGGCGCCTCGACG
                      ____________________________________________________________
consensus ATGTAGCCGCCCACGTGCGCCACGATGGGGTCCGTCCGCCACACCTTCGGCGCCTCGACG
 
. : . : . : . : . : . :
JMFN037I15+ TGGCGCCACGCGACGTTGAGCGCGTCGAAGGAAAACGAAAACGTCGTCGGGGACAACATG
JMSF024K13+ TGGCGCCACGCGACGTTGAGCGCGTCGAAGGAAAACGAAAACGTCGTCGGGGACAACATG
                      ____________________________________________________________
consensus TGGCGCCACGCGACGTTGAGCGCGTCGAAGGAAAACGAAAACGTCGTCGGGGACAACATG
 
. : . : . : . : . : . :
JMFN037I15+ TAAAGCAGGTTGGAGTGCGAGGAACGGAGGGCCGACACGTACTTGGCGGCCGGGTTCGAC
JMSF024K13+ TAAAGCAGGTTGGAGTGCGAGGAACGGAGGGCCGACACGTACTTGGCGGCCGGGTTCGAC
                      ____________________________________________________________
consensus TAAAGCAGGTTGGAGTGCGAGGAACGGAGGGCCGACACGTACTTGGCGGCCGGGTTCGAC
 
. : . : . : . : . : . :
JMFN037I15+ ACCTCCACCCACGCGCAAGAGCGATGGTCGTAGGCGCGTGTCGCCATCTCGTATGGCCAC
JMSF024K13+ ACCTCCACCCACGCGCAAGAGCGATGGTCGTAGGCGCGTGTCGCCATCTCGTATGGCCAC
                      ____________________________________________________________
consensus ACCTCCACCCACGCGCAAGAGCGATGGTCGTAGGCGCGTGTCGCCATCTCGTATGGCCAC
 
. : . : . : . : . : . :
JMFN037I15+ CGCGTGCTCTGCGTGTGAACCAACAACCACGGCTTCGGCTTGTTGAGCCACCGGAGAGAC
JMSF024K13+ CGCGTGCTCTGCGTGTGAACCAACAACCACGGCTTCGGCTTGTTGAGCCACCGGAGAGAC
                      ____________________________________________________________
consensus CGCGTGCTCTGCGTGTGAACCAACAACCACGGCTTCGGCTTGTTGAGCCACCGGAGAGAC
 
. : . : . : . : . : . :
JMFN037I15+ GCCGTCACGGCGGAGTTCCATGACTTTGACACAGCCGACGCCGGCACCAAATCCACAAGC
JMSF024K13+ GCCGTCACGGCGGAGTTCCATGACTTTGACACAGCCGACGCCGGCACCAAATCCACAAGC
                      ____________________________________________________________
consensus GCCGTCACGGCGGAGTTCCATGACTTTGACACAGCCGACGCCGGCACCAAATCCACAAGC
 
. : . : . : . : . : . :
JMFN037I15+ GGCACGTACGAAAGCACCACTTCCAAAATGTCACCGTGAATATGATCATTAGTCAAAGCC
JMSF024K13+ GGCACGTACGAAAGCACCACTTCCAAAATGTCACCGTGAATATGATCATTAGTCAAAGCC
                      ____________________________________________________________
consensus GGCACGTACGAAAGCACCACTTCCAAAATGTCACCGTGAATATGATCATTAGTCAAAGCC
 
. : . : . : . : . : . :
JMFN037I15+ ATTATACCCAACGAACCCAAATAATCTCTGATGGCTGATCGATTTTAAGGAAAGTGTGAA
JMSF024K13+ ATTATACACAACGAACCCAAATAATCTCTGATGGCTGATCGATTTTAAGGAAAGTGTGAA
                      ____________________________________________________________
consensus ATTATACCCAACGAACCCAAATAATCTCTGATGGCTGATCGATTTTAAGGAAAGTGTGAA
 
. : . : . : . : . : . :
JMFN037I15+ CGATTTGTAAATTGTAAATTTATTATAGGGTAATGGATAA
JMSF024K13+ CGATTTGTAAATTGTAAATTTATTATAGGGTAATGGATAATGAGAAACTCGACTACCCTC
                      ____________________________________________________________
consensus CGATTTGTAAATTGTAAATTTATTATAGGGTAATGGATAATGAGAAACTCGACTACCCTC