Contig 007894:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009O12Sequence461007894 (7)ref|XP_009795166.1|50.1PREDICTED: uncharacterized protein LOC104241904 [Nicotiana sylvestris]785007894 (7)ref|XP_009795166.1|318PREDICTED: uncharacterized protein LOC104241904 [Nicotiana sylvestris]
JMFF013K06Sequence472007894 (7)ref|XP_009616579.1|50.8PREDICTED: uncharacterized protein LOC104109081 [Nicotiana tomentosiformis]789007894 (7)emb|CDP19329.1|3e-105unnamed protein product [Coffea canephora]
JMFF027L20Sequence490007894 (7)ref|XP_009616579.1|50.4PREDICTED: uncharacterized protein LOC104109081 [Nicotiana tomentosiformis]740007894 (7)emb|CDP19329.1|3e-95unnamed protein product [Coffea canephora]
JMSF024E05Sequence669007894 (7)ref|XP_009616579.1|154PREDICTED: uncharacterized protein LOC104109081 [Nicotiana tomentosiformis]766023532gb|KDP39717.1|2e-44hypothetical protein JCGZ_02737 [Jatropha curcas]

Alignment

This contig is upended


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rJMFF027L20-                                                          AAGAGAGGTTTA
rJMFF009O12-                                                         AAAGAGAGGTTTA
                      ____________________________________________________________
consensus                                                            AAAGAGAGGTTTA
 
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rJMFF027L20-          TGATACAGCATATGAGCAATTGTTATACACAGGCTTAGAAACAATAACAGCATCAAGGGG
rJMFF009O12-          TGATACAGCATATGAGCAATTGTTATACACAGGCTTAGAAACAATAACAGCATCAAGGGG
rJMFF013K06-                    TATGAGCAATTGTTATACACAGGCTTAGAAACAATAACAGCATCAAGGGG
                      ____________________________________________________________
consensus             TGATACAGCATATGAGCAATTGTTATACACAGGCTTAGAAACAATAACAGCATCAAGGGG
 
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rJMFF027L20-          ATGCTTGCAGGGATAGAGCAAATGTGGGTTTCTTCTCCCAGTAAGACTACTGCTTTAGCT
rJMFF009O12-          ATGCTTGCAGGGATAGAGCAAATGTGGGTTTCTTCTCCCAGTAAGACTACTGCTTTAGCT
rJMFF013K06-          ATGCTTGCAGGGATAGAGCAAATGTGGGTTTCTTCTCCCAGTAAGACTACTGCTTTAGCT
                      ____________________________________________________________
consensus             ATGCTTGCAGGGATAGAGCAAATGTGGGTTTCTTCTCCCAGTAAGACTACTGCTTTAGCT
 
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rJMFF027L20-          TTAGCTTTACCATTTTTAGCAAGTAGCAAGAGGGGCAGAATTTACAGGCTGCAGGGGACA
rJMFF009O12-          TTAGCTTTACCATTTTTAGCAAGTAGCAAGAGGGGCAGAATTTACAGGCTGCAGGGGACA
rJMFF013K06-          TTAGCTTTACCATTTTTAGCAAGTAGCAAGAGGGGCAGAATTTACAGGCTGCAGGGGACA
                      ____________________________________________________________
consensus             TTAGCTTTACCATTTTTAGCAAGTAGCAAGAGGGGCAGAATTTACAGGCTGCAGGGGACA
 
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rJMFF027L20-          CCCTTGTTGTATGTATGTATATCAGGGTGCTGAAGATGGCATTGAGAGATACTGCCTCCA
rJMFF009O12-          CCCTTGTTGTATGTATGTATATCAGGGTGCTGAAGATGGCATTGAGAGATACTGCCTCCA
rJMFF013K06-          CCCTTGTTGTATGTATGTATATCAGGGTGCTGAAGATGGCATTGAGAGATACTGCCTCCA
                      ____________________________________________________________
consensus             CCCTTGTTGTATGTATGTATATCAGGGTGCTGAAGATGGCATTGAGAGATACTGCCTCCA
 
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rJMFF027L20-          TTCTTCAGGAGTCCCCTTCCTCTTCTCCAACATCTTTATAGCCGCCGCGGTTAACGGTAT
rJMFF009O12-          TTCTTCAGGAGTCCCCTTCCTCTTCTCCAACATCTTTATAGCCGCCGCGGTTAACGGTAT
rJMFF013K06-          TTCTTCAGGAGTCCCCTTCCTCTTCTCCAACATCTTTATAGCCGCCGCGGTTAACGGTAT
                      ____________________________________________________________
consensus             TTCTTCAGGAGTCCCCTTCCTCTTCTCCAACATCTTTATAGCCGCCGCGGTTAACGGTAT
 
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rJMFF027L20-          GGCAACTAGGTCATACTCCTTGGGAGCCTTAGGGACACTCATCAGCTTCATATTTGCTTC
rJMFF009O12-          GGCAACTAGGTCATACTCCTTGGGAGCCTTAGGGACACTCATCAGCTTCATATTTGCTTC
rJMFF013K06-          GGCAACTAGGTCATACTCCTTGGGAGCCTTAGGGACACTCATCAGCTTCATATTTGCTTC
                      ____________________________________________________________
consensus             GGCAACTAGGTCATACTCCTTGGGAGCCTTAGGGACACTCATCAGCTTCATATTTGCTTC
 
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rJMFF027L20-          TTCTAGTGTCTTTTGCCCTTTTCTTGAATTGCATCTCGCACAAGCAGTCACCAGATTTTC
rJMFF009O12-          TTCTAGTGTCTTTTGCCCTTTTCTTGAATTGCATCTCGCACAAGCAGTCACCAGATTTTC
rJMFF013K06-          TTCTAGTGTCTTTCGCCCTTTTCTTGAATTGCATCTCGCACAAGCAGTCACCAGATTTTC
                      ____________________________________________________________
consensus             TTCTAGTGTCTTTTGCCCTTTTCTTGAATTGCATCTCGCACAAGCAGTCACCAGATTTTC
 
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rJMFF027L20-          CCAGGTCCATTCCCCACCTCGTGCAACTGACACAACATGGTCAATAGTCAAGTTCTCACG
rJMFF009O12-          CCAGGTCCATTCCCCACCTCGTGCAACTGACACAACATGGTCAATAGTCAAGTTCTCACG
rJMFF013K06-          CCAGGTCCATTCCCCACCTCGTGCAACTGACACAACATGGTCAATAGTCAAGTTCTCACG
                      ____________________________________________________________
consensus             CCAGGTCCATTCCCCACCTCGTGCAACTGACACAACATGGTCAATAGTCAAGTTCTCACG
 
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rJMFF027L20-          AGAAGAACAATATTGACACGTAAAGTTGTCCCGATAAAAGATATTCTTACGACTAAGTGC
rJMFF009O12-          AGAAGAACAATATTGACACGTAAAGTTGTCCCGATAAAAGATATTCTTACGACTAAGTGC
rJMFF013K06-          AGAAGAACAATATTGACACGTAAAGTTGTCCCGATAAAAGATATTCTTACGACTAAGTGC
                      ____________________________________________________________
consensus             AGAAGAACAATATTGACACGTAAAGTTGTCCCGATAAAAGATATTCTTACGACTAAGTGC
 
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rJMFF027L20-          CCTCTTGACTCTTCTCCTTTTGACAACCTGAAGTAAATGAGGAACCCTTAGCACAGCAGG
rJMFF009O12-          CCTCTTGACTCTTCTCCTTTTGACAACCTGAAGTAAATGAGGAACCCTTAGCACAGCAGG
rJMFF013K06-          CCTCTTGACTCTTCTCCTTTTGACAACCTGAAGTAAATGAGGAACCCTTAGCACAGCAGG
JMSF024E05+                                                              CACAGCAGG
                      ____________________________________________________________
consensus             CCTCTTGACTCTTCTCCTTTTGACAACCTGAAGTAAATGAGGAACCCTTAGCACAGCAGG
 
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rJMFF027L20-          TATATAGAAGGAACCACTCGGAGAGTTCACAGTTTGGTCATAATACTCCAAAACATCTGC
rJMFF009O12-          TATATAGAAGGAACCACTCGGAGAGTTCACAGTTTGGTCATAATACTCCAAAACATCTGC
rJMFF013K06-          TATATAGAAGGAACCACTCGGAGAGTTCACAGTTTGGTCATAATACTCCAAAACATCTGC
JMSF024E05+           TATATAGAAGGAACCACTCGGAGAGTTCACAGTTTGGTCATAATACTCCAAAACATCTGC
                      ____________________________________________________________
consensus             TATATAGAAGGAACCACTCGGAGAGTTCACAGTTTGGTCATAATACTCCAAAACATCTGC
 
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rJMFF027L20-          CTTCTCCATAAACTCTAAACAAATAGCTCGCTTCCAGCAGACAACATTGACAGGTCTGTA
rJMFF009O12-          CTTCTCCATAAACTCTAAACAAATAGCTCGCTTCCAGCAGACAACATTGACAGGTCTGTA
rJMFF013K06-          CTTCTCCATAAACTCTAAACAAATAGCTCGCTTCCAGCAGACAACATTGACAGGTCTGTA
JMSF024E05+           CTTCTCCATAAACTCTAAACAAATAGCTCGCTTCCAGCAGACAACATTGACAGGTCTGTA
                      ____________________________________________________________
consensus             CTTCTCCATAAACTCTAAACAAATAGCTCGCTTCCAGCAGACAACATTGACAGGTCTGTA
 
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rJMFF027L20-          AGCAAGGT                                                    
rJMFF009O12-          AGCAAGGTCCAACACTAAACCTCTGAAGGAAGACAGCTCGTCCCTCTGGATC        
rJMFF013K06-          AGCAAGGTCCAACACTAAACCTCTGAAGGAAGACAGCTCGTCCCTCTGGATCTCCGAAAC
JMFF027L20+                                                                CCGAAAC
JMSF024E05+           AGCAAGGTCCAACACTAAACCTCTGAAGGAAGACAGCTCGTCCCTCTGGATCTCCGAAAC
                      ____________________________________________________________
consensus             AGCAAGGTCCAACACTAAACCTCTGAAGGAAGACAGCTCGTCCCTCTGGATCTCCGAAAC
 
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rJMFF013K06-          CTCGTCCATGATCTCCTCA                                         
JMFF013K06+             CGTCCATGATCTCCTCAAAGAAGTCGTCTTCGCCGCCGTCCGGCACAGGATTCGAATG
JMFF009O12+                             AAAGAAGTCGTCTTCGCCGCCGTCCGGCACAGGATTCGAATG
JMFF027L20+           CTCGTCCATGATCTCCTCAAAGAAGTCGTCTTCGCCGCCGTCCGGCACAGGATTCGAATG
JMSF024E05+           CTCGTCCATGATCTCCTCAAAGAAGTCGTCTTCGCCGCCGTCCGGCACAGGATTCGAATG
                      ____________________________________________________________
consensus             CTCGTCCATGATCTCCTCAAAGAAGTCGTCTTCGCCGCCGTCCGGCACAGGATTCGAATG
 
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JMFF013K06+           TAACTCCTTGGATTTGCCGAGCGACGACGACGGAGATGAGGCATTAGCGTACACTCTAGT
JMFF009O12+           TAACTCCTTGGATTTGCCGAGCGACGACGACGGAGATGAGGCATTAGCGTACACTCTAGT
JMFF027L20+           TAACTCCTTGGATTTGCCGAGCGACGACGACGGAGATGAGGCATTAGCGTACACTCTAGT
JMSF024E05+           TAACTCCTTGGATTTGCCGAGCGACGACGACGGAGATGAGGCATTAGCGTACACTCTAGT
                      ____________________________________________________________
consensus             TAACTCCTTGGATTTGCCGAGCGACGACGACGGAGATGAGGCATTAGCGTACACTCTAGT
 
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JMFF013K06+           AATCCTGCCGGGACCACTAAACCTGAGTCTGAGCTCTTGAAGTTGAAGAGGAAATGAAGA
JMFF009O12+           AATCCTGCCGGGACCACTAAACCTGAGTCTGAGCTCTTGAAGTTGAAGAGGAAATGAAGA
JMFF027L20+           AATCCTGCCGGGACCACTAAACCTGAGTCTGAGCTCTTGAAGTTGAAGAGGAAATGAAGA
JMSF024E05+           AATCCTGCCGGGACCACTAAACCTGAGTCTGAGCTCTTGAAGTTGAAGAGGAAATGAAGA
                      ____________________________________________________________
consensus             AATCCTGCCGGGACCACTAAACCTGAGTCTGAGCTCTTGAAGTTGAAGAGGAAATGAAGA
 
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JMFF013K06+           CGTCACCGCCGCAGCGGCACTGAATCCGCCGCCGGAAGCTTTGAACCGGCGGCGCGACGG
JMFF009O12+           CGTCACCGCCGCAGCGGCACTGAATCCGCCGCCGGAAGCTTTGAACCGGCGGCGCGACGG
JMFF027L20+           CGTCACCGCCGCAGCGGCACTGAATCCGCCGCCGGAAGCTTTGAACCGGCGGCGCGACGG
JMSF024E05+           CGTCACCGCCGCAGCGGCACTGAATCCGCCGCCGGAAGCTTTGAACCGGCGGCGCGACGG
                      ____________________________________________________________
consensus             CGTCACCGCCGCAGCGGCACTGAATCCGCCGCCGGAAGCTTTGAACCGGCGGCGCGACGG
 
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JMFF013K06+           CGGCGACGAGGAGGAGGAGGACGGAGACTTGTTGAATTCGAAGGCGTCGCCGTTTAACAG
JMFF009O12+           CGGCGACGAGGAGGAGGAGGACGGAGACTTGTTGAATTCGAAGGCGTCGCCGTTTAACAG
JMFF027L20+           CGGCGACGAGGAGGAGGAGGACGGAGACTTGTTGAATTCGAAGGCGTCGCCGTTTAACAG
JMSF024E05+           CGGCGACGAGGAGGAGGAGGACGGAGACTTGTTGAATTCGAAGGCGTCGCCGTTTAACAG
                      ____________________________________________________________
consensus             CGGCGACGAGGAGGAGGAGGACGGAGACTTGTTGAATTCGAAGGCGTCGCCGTTTAACAG
 
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JMFF013K06+           AGGCTTTAAGCGGCCCCTCACTGTGAACTGCGCCATGTCCCAACTCCGAAGGATCAAAGT
JMFF009O12+           AGGCTTTAAGCGGCCCCTCACTGTGAACTGCGCCATGTCCCAACTCCGAAGGATCAAAGT
JMFF027L20+           AGGCTTTAAGCGGCCCCTCACTGTGAACTGCGCCATGTCCCAACTCCGAAGGATCAAAGT
JMSF024E05+           AGGCTTTAAGCGGCCCCTCACTGTGAACTGCGCCATGTCCCAACTCCGAAGGATCAAAGT
                      ____________________________________________________________
consensus             AGGCTTTAAGCGGCCCCTCACTGTGAACTGCGCCATGTCCCAACTCCGAAGGATCAAAGT
 
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JMFF013K06+           GATATTTTTGCTTCTTCTTCACACAGAGCTTTAGCCTTTAGGGATGATCGTTACTTCTTT
JMFF009O12+           GATATTTTTGCTTCTTCTTCACACAGAGCTTTAGCCTTTAGGGATGATCGTTACTTCTTT
JMFF027L20+           GATATTTTTGCTTCTTCTTCACACAGAGCTTTAGCCTTTAGGGATGATCGTTACTTCTTT
JMSF024E05+           GATATTTTTGCTTCTTCTTCACACAGAGCTTTAGCCTTTAGGGATGATCGTTACTTCTTT
                      ____________________________________________________________
consensus             GATATTTTTGCTTCTTCTTCACACAGAGCTTTAGCCTTTAGGGATGATCGTTACTTCTTT
 
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JMFF013K06+           GTTGGAACGGTTGATTGTGTTGTCTTCTTCCTGAGGAATATATTATTACAAAGC      
JMFF009O12+           GTTGGAACGGTTGATTGTGTTGTCTTCTTCCTGAGGAATATATTATTACAAAGC      
JMFF027L20+           GTTGGAACGGTTGATTGTGTTGTCTTCTTCCTGAGGAATATATTATTACAAAGC      
JMSF024E05+           GTTGGAACGGTTGATTGTGTTGTCTTCTTCCTGAGGAATATATTATTACAAAGCAAAGCC
                      ____________________________________________________________
consensus             GTTGGAACGGTTGATTGTGTTGTCTTCTTCCTGAGGAATATATTATTACAAAGCAAAGCC