Contig 007893:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF024D17+                                                                   GCTT
                      ____________________________________________________________
consensus                                                                     GCTT
 
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JMSF024D17+           TTGGATGAAGTAGGGTTGTGCTAGTGGCATTACCTTTGGGGGGCTTCTTTCNTGAAGCAG
                      ____________________________________________________________
consensus             TTGGATGAAGTAGGGTTGTGCTAGTGGCATTACCTTTGGGGGGCTTCTTTCNTGAAGCAG
 
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JMFF044E20+                 TTGCAAAATTGTAAAAGCCATTCTGCATCGGTTGTGATGGATCTCCATTAGAGG
JMFF046C01+                 TTGCAAAATNGTAAAAGCCATTCTGCATCGGTTGTGATGGATCTCCATNAGAGG
JMSF024D17+           TACTCTTTGCAAAATTGTAAAAGCCATTCTGCATCGGTTGTGATGGATCTCCATTAGAGG
                      ____________________________________________________________
consensus             TACTCTTTGCAAAATTGTAAAAGCCATTCTGCATCGGTTGTGATGGATCTCCATTAGAGG
 
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JMFF044E20+           ACTGAACATTCTTCTGGAACACATTAGCATGCTTCTGGTCATATGCTGATTTTTTGTCCT
JMFF046C01+           ACTGAACATTCTTCTGGAACACATTAGCATGCTTCTGGTCATATGCTGATTTTTTGTCCT
JMSF024D17+           ACTGAACATTCTTCTGGAACACATTAGCATGCTTCTGGTCATATGCTGATTTTTTGTCCT
                      ____________________________________________________________
consensus             ACTGAACATTCTTCTGGAACACATTAGCATGCTTCTGGTCATATGCTGATTTTTTGTCCT
 
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JMFF044E20+           TGTCAGAAAGCAAGCTCCAGGCTTCTGAAAGATGTTTAAAGGCTCCTTCAGCACCAATAG
JMFF046C01+           TGTCAGAAAGCAAGCTCCAGGCTTCTGAAAGATGTTTAAAGGCTCCTTCAGCACCAATAG
JMSF024D17+           TGTCAGAAAGCAAGCTCCAGGCTTCTGAAAGATGTTTAAAGGCTCCTTCAGCACCAATAG
                      ____________________________________________________________
consensus             TGTCAGAAAGCAAGCTCCAGGCTTCTGAAAGATGTTTAAAGGCTCCTTCAGCACCAATAG
 
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JMFF044E20+           ATTTGTTCTTATCAGGATGAAGAATAAGAGCCAATTTCCTGTACTGCTTTCTAATTGCAT
JMFF046C01+           ATTTGTTCTTATCAGGATGAAGAATAAGAGCCAATTTCCTGTACTGCTTTCTAATTGCAT
JMSF024D17+           ATTTGTTCTTATCAGGATGAAGAATAAGAGCCAATTTCCTGTACTGCTTTCTAATTGCAT
                      ____________________________________________________________
consensus             ATTTGTTCTTATCAGGATGAAGAATAAGAGCCAATTTCCTGTACTGCTTTCTAATTGCAT
 
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JMFF044E20+           CTTCATCAGCTTGTGGATTAACACCAAGAATTTCATAAAAGTTCACTTCCCCATTAACTC
JMFF046C01+           CTTCATCAGCTTGTGGATTAACACCAAGAATTTCATAAAAGTTCACTTCCCCATTAACTC
JMSF024D17+           CTTCATCAGCTTGTGGATTAACACCAAGAATTTCATAAAAGTTCACTTCCCCATTAACTC
                      ____________________________________________________________
consensus             CTTCATCAGCTTGTGGATTAACACCAAGAATTTCATAAAAGTTCACTTCCCCATTAACTC
 
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JMFF044E20+           TGTTCTCAGCAGAAACATAAATATCAAGTGTTGCCAACATCTGTGCAATGCCTTCAAGTC
JMFF046C01+           TGTTCTCAGCAGAAACATAAATATCAAGTGTTGCCAACATCTGTGCAATGCCTTCAAGTC
JMSF024D17+           TGTTCTCAGCAGAAACATAAATATCAAGTGTTGCCAACATCTGTGCAATGCCTTCAAGTC
                      ____________________________________________________________
consensus             TGTTCTCAGCAGAAACATAAATATCAAGTGTTGCCAACATCTGTGCAATGCCTTCAAGTC
 
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JMFF044E20+           CAGGATATAAAGTCTGTGCCTTGTGAGCAAATTTCTTTGCTCCAATAACATCCTTTGCTA
JMFF046C01+           CAGGATATAAAGTCTGTGCCTTGTGAGCAAATTTCTTTGCTCCAATAACATCCTTTGCTA
JMSF024D17+           CAGGATATAAAGTCTGTGCCTTGTGAGCAAATTTCTTTGCTCCAATAACATCCTTTGCTA
                      ____________________________________________________________
consensus             CAGGATATAAAGTCTGTGCCTTGTGAGCAAATTTCTTTGCTCCAATAACATCCTTTGCTA
 
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JMFF044E20+           AAAACTTCTTCTCTGCAATTTCTTTCGACCTCATAGCCTCATCTTTGTTACAATCCATCA
JMFF046C01+           AAAACTTCTTCTCTGCAATTTCTTTCGACCTCATAGCCTCATCTTTGTTACAATCCATCA
JMSF024D17+           AAAACTTCTTCTCTGCAATTTCTTTCGACCTCATAGCCTCATCTTTGTTACAATCCATCA
                      ____________________________________________________________
consensus             AAAACTTCTTCTCTGCAATTTCTTTCGACCTCATAGCCTCATCTTTGTTACAATCCATCA
 
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JMFF044E20+           ACCTTGCCTATCTTGTTGTCACCGAATTGATATAGTACAATAGAAACAGAGGCACAGAGC
JMFF046C01+           ACCTTGCCTATCTTGTTGTCACCGAATTGATATAGTACAATAGAAACAGAGGCACAGAGC
JMSF024D17+           ACCTTGCCTATCTTGTTGTCACCGAATTGATATAGTACAATAGAAACAGAGGCACAGAGC
                      ____________________________________________________________
consensus             ACCTTGCCTATCTTGTTGTCACCGAATTGATATAGTACAATAGAAACAGAGGCACAGAGC
 
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JMFF044E20+           TGGTCGGGGCTTAAAGCTTTGAATCACAGACAAGCCATGGACGAGAAGCTCAATCGCAAA
JMFF046C01+           TGGTCGGGGCTTAAAGCTTTGAATCACAGACAAGCCATGGACGAGAAGCTCAATAGCAAA
JMSF024D17+           TGGTCGGGGCTTAAAGCTTTGAATCACAGACAAGCCATGGACGAGAAGCTCAATCGCAAA
                      ____________________________________________________________
consensus             TGGTCGGGGCTTAAAGCTTTGAATCACAGACAAGCCATGGACGAGAAGCTCAATCGCAAA
 
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JMFF044E20+           CTGATTTTCTTTTCCTTTCTTCTTT                                   
JMFF046C01+           CT                                                          
JMSF024D17+           CTGATTTTCTTTTCCTTTCTTCTTTGGGTTTTTGCCCCTGATTTCCTAAGTTTAATTCCC
                      ____________________________________________________________
consensus             CTGATTTTCTTTTCCTTTCTTCTTTGGGTTTTTGCCCCTGATTTCCTAAGTTTAATTCCC