Contig 007892:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF023O17Sequence646007892 (2)ref|XP_004246060.1|2e-132PREDICTED: cytoplasmic tRNA 2-thiolation protein 1 [Solanum lycopersicum]747007892 (2)ref|XP_006355236.1|4e-107PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like [Solanum tuberosum]

Alignment

This contig is upended


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rJMSF023O17- ATGATGTAGATACA
                      ____________________________________________________________
consensus ATGATGTAGATACA
 
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rJMSF023O17- AATAAAGTATAAACTCACAGAAAAACTTTATCCCCTCCTTCCCGTTATAGTTTCTTCAGT
                      ____________________________________________________________
consensus AATAAAGTATAAACTCACAGAAAAACTTTATCCCCTCCTTCCCGTTATAGTTTCTTCAGT
 
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rJMSF023O17- AGTGACGCCTAAAAGCTATGTTCTGTTCAATTACTATGCAGGACGGGAATATTAACTATG
                      ____________________________________________________________
consensus AGTGACGCCTAAAAGCTATGTTCTGTTCAATTACTATGCAGGACGGGAATATTAACTATG
 
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rJMSF023O17- AAGAGTTTGTAGGAATGATGAAGAAATGGGGGTAGTAGATGGTCAAGGGAAGCAGGGATA
                      ____________________________________________________________
consensus AAGAGTTTGTAGGAATGATGAAGAAATGGGGGTAGTAGATGGTCAAGGGAAGCAGGGATA
 
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rJMSF023O17- ATATTAATACTCTGTTGCAAATTCTTTAATTGATTTGTAAATGTGCATCAGAAGTCCAAA
                      ____________________________________________________________
consensus ATATTAATACTCTGTTGCAAATTCTTTAATTGATTTGTAAATGTGCATCAGAAGTCCAAA
 
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rJMSF023O17- CTTCCACACTGTTTGCTCTGCAAATTCTTGGTGCCATTAGCTTGTTTTGTATTCTTGGTA
                      ____________________________________________________________
consensus CTTCCACACTGTTTGCTCTGCAAATTCTTGGTGCCATTAGCTTGTTTTGTATTCTTGGTA
 
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rJMSF023O17- TGATCACTATTAAGTCCTCGGCTACGCCCAATTCCCAGTTTGGGTAAACCCCGATTTAGT
                      ____________________________________________________________
consensus TGATCACTATTAAGTCCTCGGCTACGCCCAATTCCCAGTTTGGGTAAACCCCGATTTAGT
 
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rJMSF023O17- CCGTCCAGCAAAACACATGCTTTACACCATTTCTGGCTGGATATGTAACCACATCGTTCG
                      ____________________________________________________________
consensus CCGTCCAGCAAAACACATGCTTTACACCATTTCTGGCTGGATATGTAACCACATCGTTCG
 
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rJMSF023O17- CAATTTCCTTGTTCTGGCATTTTTGCGGAAGTCGAGATCCTGAAGTCCTCACCAGATTTG
                      ____________________________________________________________
consensus CAATTTCCTTGTTCTGGCATTTTTGCGGAAGTCGAGATCCTGAAGTCCTCACCAGATTTG
 
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rJMSF023O17- ATGATATCCAGTATGGATTGTGGTCTGATTCTCTCTAAATCCTTGATGAACTCACGAGCA
                      ____________________________________________________________
consensus ATGATATCCAGTATGGATTGTGGTCTGATTCTCTCTAAATCCTTGATGAACTCACGAGCA
 
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rJMSF023O17- AAGCCACGGTATGCATTTGGAGAGTAAATGCATTCAGTGGAGAAGTAATCCAACTTTTTA
                      ____________________________________________________________
consensus AAGCCACGGTATGCATTTGGAGAGTAAATGCATTCAGTGGAGAAGTAATCCAACTTTTTA
 
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rJMSF023O17- AAGTATGCATACATAACAATTTCCTTCTCGTATGTGTATTTGAAAGGCTTGCATCTAGGA
                      ____________________________________________________________
consensus AAGTATGCATACATAACAATTTCCTTCTCGTATGTGTATTTGAAAGGCTTGCATCTAGGA
 
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rJMSF023O17- ATAGGTCCATCTTCTCCAGTAACTATAGATGTACACCTACTCAACCTGGCAATATCACCA
JMSF023O17+ TCCAGTAACTATAGATGTACACCTACTCAACCTGGCAATATCACCA
                      ____________________________________________________________
consensus ATAGGTCCATCTTCTCCAGTAACTATAGATGTACACCTACTCAACCTGGCAATATCACCA
 
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rJMSF023O17- CGTAATATGTTCA
JMSF023O17+ CGTAATATGTTCAGAAGAACTGTTTCAGCTATATCATCTGCATTATGCCCAGTTACTAGC
                      ____________________________________________________________
consensus CGTAATATGTTCAGAAGAACTGTTTCAGCTATATCATCTGCATTATGCCCAGTTACTAGC
 
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JMSF023O17+ TTGTCCACTTTTAGCAATGCAGCACCACGGTCAAGGGCCTGGCGACGGAAAACACCACAA
                      ____________________________________________________________
consensus TTGTCCACTTTTAGCAATGCAGCACCACGGTCAAGGGCCTGGCGACGGAAAACACCACAA
 
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JMSF023O17+ AAAGTGCAGTTGTTCTTCAGACCTATCAACTTTACTATTTCATCCATTGTCCATCCATAC
                      ____________________________________________________________
consensus AAAGTGCAGTTGTTCTTCAGACCTATCAACTTTACTATTTCATCCATTGTCCATCCATAC
 
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JMSF023O17+ AGCTCCTTATAGGAAACAACTTTCAATGGAAGTCCATACTGGATTTCATTTCTTTTAACA
                      ____________________________________________________________
consensus AGCTCCTTATAGGAAACAACTTTCAATGGAAGTCCATACTGGATTTCATTTCTTTTAACA
 
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JMSF023O17+ GTTTCAAGAGAATCATCCCTGTAACCAGTGATACCTTCATCCACAGATAACAGGAAGAGA
                      ____________________________________________________________
consensus GTTTCAAGAGAATCATCCCTGTAACCAGTGATACCTTCATCCACAGATAACAGGAAGAGA
 
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JMSF023O17+ TCCAGGCCATAATTGTGCCTGCGATTCAACTCTGACATCACATAAGCAAGCACCGTGGAG
                      ____________________________________________________________
consensus TCCAGGCCATAATTGTGCCTGCGATTCAACTCTGACATCACATAAGCAAGCACCGTGGAG
 
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JMSF023O17+ TCTTTTCCGCCAGAAGCGCCAACAGCGATGCGTTCGCCGGGCCTGGAGAGCTGGTTGTCG
                      ____________________________________________________________
consensus TCTTTTCCGCCAGAAGCGCCAACAGCGATGCGTTCGCCGGGCCTGGAGAGCTGGTTGTCG
 
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JMSF023O17+ ACGATAACCCTATGGATCTCCTCCTCGAAAACTTCATAGAAGCACTCCCTGCATATTTGT
                      ____________________________________________________________
consensus ACGATAACCCTATGGATCTCCTCCTCGAAAACTTCATAGAAGCACTCCCTGCATATTTGT
 
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JMSF023O17+ TGAAGAGTTTTAGGGCGTTTCAGGGCGGCGCGTCTTTCATTGCAGATAGCGCACTGTCTA
                      ____________________________________________________________
consensus TGAAGAGTTTTAGGGCGTTTCAGGGCGGCGCGTCTTTCATTGCAGATAGCGCACTGTCTA
 
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JMSF023O17+ CCCTTCGGTTTCGCCACGGCCGTCGCCGACTCCATGTAGATGGCCACCGCGCCGTCGCCC
                      ____________________________________________________________
consensus CCCTTCGGTTTCGCCACGGCCGTCGCCGACTCCATGTAGATGGCCACCGCGCCGTCGCCC