| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF012M04 | Sequence | 580 | 007834 (7) | gb|EYU27512.1| | 3e-56 | hypothetical protein MIMGU_mgv1a018266mg [Erythranthe guttata] | 687 | 007834 (7) | emb|CDP13637.1| | 6e-36 | unnamed protein product [Coffea canephora] |
| JMFF042I05 | Sequence | 659 | 007834 (7) | emb|CDP13637.1| | 5e-34 | unnamed protein product [Coffea canephora] | 640 | 007834 (7) | emb|CDP13637.1| | 1e-36 | unnamed protein product [Coffea canephora] |
| JMSF016J07 | Sequence | 246 | 007834 (7) | gb|EYU27512.1| | 2e-14 | hypothetical protein MIMGU_mgv1a018266mg [Erythranthe guttata] | 763 | 007834 (7) | ref|XP_009783809.1| | 2e-42 | PREDICTED: PRA1 family protein G2 [Nicotiana sylvestris] |
| JMSF016O18 | Sequence | 291 | 007834 (7) | gb|EYU27512.1| | 1e-23 | hypothetical protein MIMGU_mgv1a018266mg [Erythranthe guttata] | 616 | 013428 (4) | ref|XP_009626880.1| | 245 | PREDICTED: uncharacterized protein LOC104117521 [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
rJMFF012M04- ATTCTGGGAAAAAAGCTTGAATCTTAAACACA
rJMSF016J07- CCTATCACCCAATTCTGGGAAAAAAGCTTGAATCTTAAACACA
____________________________________________________________
consensus CCTATCACCCAATTCTGGGAAAAAAGCTTGAATCTTAAACACA
. : . : . : . : . : . :
JMFF042I05- TTTTGTAACTCGACAACTTTCAGCAAGCAATAACCACGAACGGT
rJMFF012M04- TTCCAATACAGGTGCATTTTGTAACTCGACAACTTTCAGCAAGCAATAACCACGAACGGT
rJMFF042I05+ TGTAACTCGACAACTTTCAGCAAGCAATAACCACGAACGGT
rJMSF016J07- TTCCAATACAGGTGCATTTTGTAACTCGACAACTTTCAGCAAGCAATAACCACGAACGGT
____________________________________________________________
consensus TTCCAATACAGGTGCATTTTGTAACTCGACAACTTTCAGCAAGCAATAACCACGAACGGT
. : . : . : . : . : . :
JMFF042I05- TCATTTCCGACGAAATAACTTACATCACAAGCTCTCCCTACTAGCGTAAATTCACACACA
rJMFF012M04- TCATTTCCGACGAAATAACTTACATCACAAGCTCTCCCTACTAGCGTAAATTCACACACA
rJMFF042I05+ TCATTTCCGACGAAATAACTTACATCACAAGCTCTCCCTACTAGCGTAAATTCACACACA
rJMSF016J07- TCATTTCCGACGAAATAACTTACATCACAAGCTCTCCCTACTAGCGTAAATTCACACACA
____________________________________________________________
consensus TCATTTCCGACGAAATAACTTACATCACAAGCTCTCCCTACTAGCGTAAATTCACACACA
. : . : . : . : . : . :
JMFF042I05- AAAAAACACACCGAATATATGATTAAGCAAACAAGCAAACAGAACCTTCTTCAGAAGCAG
rJMFF012M04- AAAAAACACACCGAATATATGATTAAGCAAACAAGCAAACAGAACCTTCTTCAGAAGCAG
rJMFF042I05+ AAAAAACACACCGAATATATGATTAAGCAAACAAGCAAACAGAACCTTCTTCAGAAGCAG
rJMSF016J07- AAAAAACACACCGAATATATGATTAAGCAAACAAGCAAACAGAACCTTCTTCAGAAGCAG
____________________________________________________________
consensus AAAAAACACACCGAATATATGATTAAGCAAACAAGCAAACAGAACCTTCTTCAGAAGCAG
. : . : . : . : . : . :
JMFF042I05- ATTTCCTCAATTCACACAGAATGTGTGATTTTTGGACACCGGCTCATCTCAATTCAAGTC
rJMFF012M04- ATTTCCTCAATTCACACAGAATGTGTGATTTTTGGACACCGGCTCATCTCAATTCAAGTC
rJMFF042I05+ ATTTCCTCAATTCACACAGAATGTGTGATTTTTGGACACCGGCTCATCTCAATTCAAGTC
rJMSF016J07- ATTTCCTCAATTCACACAGAATGTGTGATTTTTGGACACCGGCTCATCTCAATTCAAGTC
____________________________________________________________
consensus ATTTCCTCAATTCACACAGAATGTGTGATTTTTGGACACCGGCTCATCTCAATTCAAGTC
. : . : . : . : . : . :
JMFF042I05- AAAGAGGACGAACTGTTTGGACTTTCAAGAGATTCCTCCATCATGCGAATTCGATACCAA
rJMFF012M04- AAAGAGGACGAACTGTTTGGACTTTCAAGAGATTCCTCCATCATGCGAATTCGATACCAA
rJMFF042I05+ AAAGAGGACGAACTGTTTGGACTTTCAAGAGATTCCTCCATCATGCGAATTCGATACCAA
rJMSF016J07- AAAGAGGACGAACTGTTTGGACTTTCAAGAGATTCCTCCATCATGCGAATTCGATACCAA
____________________________________________________________
consensus AAAGAGGACGAACTGTTTGGACTTTCAAGAGATTCCTCCATCATGCGAATTCGATACCAA
. : . : . : . : . : . :
JMFF042I05- GCCGTTTAGAACGGCGTCGTCTTCATCGAGGAAGAGCCCTTCCGGGTTCCTGAAAATCCC
rJMFF012M04- GCCGTTTAGAACGGCGTCGTCTTCATCGAGGAAGAGCCCTTCCGGGTTCCTGAAAATCCC
rJMFF042I05+ GCCGTTTAGAACGGCGTCGTCTTCATCGAGGAAGAGCCCTTCCGGGTTCCTGAAAATCCC
rJMSF016J07- GCCGTTTAGAACGGCGTCGTCTTCATCGAGGAAGAGCCCTTCCGGGTTCCTGAAAATCCC
JMFF012M04+ TCTTCATCGAGGAAGAGCCCTTCCGGGTTCCTGAAAATCCC
____________________________________________________________
consensus GCCGTTTAGAACGGCGTCGTCTTCATCGAGGAAGAGCCCTTCCGGGTTCCTGAAAATCCC
. : . : . : . : . : . :
JMFF042I05- GTGAATAGCGGAGAGTGATATCCCAACTCCAACGCCAATCAGCAGATTGTTCAAGACTCC
rJMFF012M04- GTGAATAGCGGAGAGTGATATCCCAACTCCAACGCCAATCAGCAGATTGTTCAAGACTCC
rJMFF042I05+ GTGAATAGCGGAGAGTGATATCCCAACTCCAACGCCAATCAGCAGATTGTTCAAGACTCC
rJMSF016J07- GTGAATAGCGGAGAGTGATATCCCAACTCCAACGCCAATCAGCAGATTGTTCAAGACTCC
JMFF012M04+ GTGAATAGCGGAGAGTGATATCCCAACTCCAACGCCAATCAGCAGATTGTTCAAGACTCC
____________________________________________________________
consensus GTGAATAGCGGAGAGTGATATCCCAACTCCAACGCCAATCAGCAGATTGTTCAAGACTCC
. : . : . : . : . : . :
JMFF042I05- CGTGATCCAAAGAATCAGAGCCGAACCGATAACCAGGACTGTAATCACGAGCTGATCGCC
rJMFF012M04- CGTGATCCAAAGAATCAGAGCCGAACCGATAACCAGGACTGTAATCACGAGCTGATCGCC
rJMFF042I05+ CGTGATCCAAAGAATCAGAGCCGAACCGATAACCAGGACTGTAATCACGAGCTGATCGCC
rJMSF016J07- CGTGATCCAAAGAATCAGAGCCGAACCGATAACCAGGACTGTAATCACGAGCTGATCGCC
JMFF012M04+ CGTGATCCAAAGAATCAGAGCCGAACCGATAACCAGGACTGTAATCACGAGCTGATCGCC
____________________________________________________________
consensus CGTGATCCAAAGAATCAGAGCCGAACCGATAACCAGGACTGTAATCACGAGCTGATCGCC
. : . : . : . : . : . :
JMFF042I05- AATGTGCCTGCCGCAAACAACGATCGGATCTTCACGGAAGAAGTATAGAATCAGCCAGAA
rJMFF012M04- AATGTGCCTGCCGCAAACAACGATCGGATCTTCACGGAAGAAGTATAGAATCAGCCAGAA
rJMFF042I05+ AATGTGCCTGCCGCAAACAACGATCGGATCTTCACGGAAGAAGTATAGAATCAGCCAGAA
rJMSF016J07- AATGTGCCTGCCGCAAACAACGATCGGATCTTCACGGAAGAAGTATAGAATCAGCCAGAA
JMFF012M04+ AATGTGCCTGCCGCAAACAACGATCGGATCTTCACGGAAGAAGTATAGAATCAGCCAGAA
____________________________________________________________
consensus AATGTGCCTGCCGCAAACAACGATCGGATCTTCACGGAAGAAGTATAGAATCAGCCAGAA
. : . : . : . : . : . :
JMFF042I05- CGCGAAAAGCAAGACCACGACGGCCAGCAGGATCGGCGTGCCTAAAAGCGACCCGGCTGC
rJMFF012M04- CGCGAAAAGCAAGACCACGACGGCCAGCAGGATCGGCGTGCCTAAAAGCGACCCGGCTGC
rJMFF042I05+ CGCGAAAAGCAAGACCACGACGGCCAGCAGGATCGGCGTGCCTAAAAGCGACCCGGCTGC
rJMSF016J07- CGCGAAAAGCAAGACCACGACGGCCAGCAGGATCGGCGTGCCTAAAAGCGACCCGGCTGC
JMFF012M04+ CGCGAAAAGCAAGACCACGACGGCCAGCAGGATCGGCGTGCCTAAAAGCGACCCGGCTGC
____________________________________________________________
consensus CGCGAAAAGCAAGACCACGACGGCCAGCAGGATCGGCGTGCCTAAAAGCGACCCGGCTGC
. : . : . : . : . : . :
JMFF042I05- GCAGCAGGAGATAATAATGGAGTAGTTGACGGCGAAGTAATTGGAAT
rJMFF012M04- GCAGCAGGAGATAATAATGGAGTAGTTGACGGCGAAGTAATTGGAATTTCGTCGG
rJMFF042I05+ GCAGCAGGAGATAATAATGGAGTAGTTGACGGCGAAGTAATTGGAATTTCGTCGGAGTC
rJMSF016J07- GCAGCAGGAGATAATAATGGAGTAGTTGACGGCGAAGTAATTGGAATTTCGTCGGAGTCG
JMSF016O18+ GGAGATAATAATGGAGTAGTTGACGGCGAAGTAATTGGAATTTCGTCGGAGTCG
JMFF012M04+ GCAGCAGGAGATAATAATGGAGTAGTTGACGGCGAAGTAATTGGAATTTCGTCGGAGTCG
JMSF016J07+ GAGTCG
____________________________________________________________
consensus GCAGCAGGAGATAATAATGGAGTAGTTGACGGCGAAGTAATTGGAATTTCGTCGGAGTCG
. : . : . : . : . : . :
rJMSF016J07- GATCCATACGTCGGAGGTGGAAGCCGGGAGGTCGAACGCATTGGCAGTTGAGAGGA
JMSF016O18+ GATCCATACGTCGGAGGTGGAAGCCGGGAGGTCGAACGCATTGGCAGTTGAGAGGAATTC
JMFF012M04+ GATCCATACGTCGGAGGTGGAAGCCGGGAGGTCGAACGCATTGGCAGTTGAGAGGAATTC
JMSF016J07+ GATCCATACGTCGGAGGTGGAAGCCGGGAGGTCGAACGCATTGGCAGTTGAGAGGAATTC
____________________________________________________________
consensus GATCCATACGTCGGAGGTGGAAGCCGGGAGGTCGAACGCATTGGCAGTTGAGAGGAATTC
. : . : . : . : . : . :
JMSF016O18+ CGGCCAAGGACGGCAACGGTTGAAGTAGGCGTAGAGGTTTTGTATCGAGCGTTGGACGAC
JMFF012M04+ CGGCCAAGGACGGCAACGGTTGAAGTAGGCGTAGAGGTTTTGTATCGAGCGTTGGACGAC
JMSF016J07+ CGGCCAAGGACGGCAACGGTTGAAGTAGGCGTAGAGGTTTTGTATCGAGCGTTGGACGAC
____________________________________________________________
consensus CGGCCAAGGACGGCAACGGTTGAAGTAGGCGTAGAGGTTTTGTATCGAGCGTTGGACGAC
. : . : . : . : . : . :
JMSF016O18+ GCCAGATGCTGATATGGGAATGGTGGTGTAAGTTGCGGCGGCTCCGGCGGCAGAGTGAGA
JMFF012M04+ GCCAGATGCTGATATGGGAATGGTGGTGTAAGTTGCGGCGGCTCCGGCGGCAGAGTGAGA
JMSF016J07+ GCCAGATGCTGATATGGGAATGGTGGTGTAAGTTGCGGCGGCTCCGGCGGCAGAGTGAGA
____________________________________________________________
consensus GCCAGATGCTGATATGGGAATGGTGGTGTAAGTTGCGGCGGCTCCGGCGGCAGAGTGAGA
. : . : . : . : . : . :
JMSF016O18+ GGAATTGACGACCGGATTCGCCGCCGTCGTGCTCGGTGAGGACATTTTGACGTCCG
JMFF012M04+ GGAATTGACGACCGGATTCGCCGCCGTCGTGCTCGGTGAGGACATTTTGACGTCCG
JMSF016J07+ GGAATTGACGACCGGATTCGCCGCCGTCGTGCTCGGTGAGGACATTTTGACGTCCGGACC
____________________________________________________________
consensus GGAATTGACGACCGGATTCGCCGCCGTCGTGCTCGGTGAGGACATTTTGACGTCCGGACC