Contig 007816:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF014E19Sequence244007816 (4)789007816 (4)ref|XP_009607216.1|357PREDICTED: uncharacterized protein LOC104101473 [Nicotiana tomentosiformis]
JMSF043I20Sequence779007816 (4)ref|XP_009804854.1|306PREDICTED: uncharacterized protein LOC104250017 [Nicotiana sylvestris]763007816 (4)ref|XP_009607216.1|288PREDICTED: uncharacterized protein LOC104101473 [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF043I20- GTATAAGCGTATCCTGAAGCTCTGGTATAAAATCCA
                      ____________________________________________________________
consensus GTATAAGCGTATCCTGAAGCTCTGGTATAAAATCCA
 
. : . : . : . : . : . :
rJMSF043I20- GATATTTTACATGAGCTCAGTGTTCATAAACTAGAAAATGCTCACCTCATAAGTTTTTTA
rJMSF014E19- ATGCTCACCTCATAAGTTTTTTA
                      ____________________________________________________________
consensus GATATTTTACATGAGCTCAGTGTTCATAAACTAGAAAATGCTCACCTCATAAGTTTTTTA
 
. : . : . : . : . : . :
rJMSF043I20- TGAGTATGCAATTTACAGAGTGGAGAAAGACTATTTAAGAAATAGTATCCTGCAGGAAAA
rJMSF014E19- TGAGTATGCAATTTACAGAGTGGAGAAAGACTATTTAAGAAATAGTATCCTGCAGGAAAA
                      ____________________________________________________________
consensus TGAGTATGCAATTTACAGAGTGGAGAAAGACTATTTAAGAAATAGTATCCTGCAGGAAAA
 
. : . : . : . : . : . :
rJMSF043I20- AGGAATGGTAGACAAAAGAAAACAAATTTTAACTATTCAAGAAATGGTATTTTGATTCAA
rJMSF014E19- AGGAATGGTAGACAAAAGAAAACAAATTTTAACTATTCAAGAAATGGTATTTTGATTCAA
                      ____________________________________________________________
consensus AGGAATGGTAGACAAAAGAAAACAAATTTTAACTATTCAAGAAATGGTATTTTGATTCAA
 
. : . : . : . : . : . :
rJMSF043I20- CATAGCTTTCTGCTTCCCATAAAAATGATCCTAAAGCTACTGCCTCCAGAACCAGCATGG
rJMSF014E19- CATAGCTTTCTGCTTCCCATAAAAATGATCCTAAAGCTACTGCCTCCAGAACCAGCATGG
                      ____________________________________________________________
consensus CATAGCTTTCTGCTTCCCATAAAAATGATCCTAAAGCTACTGCCTCCAGAACCAGCATGG
 
. : . : . : . : . : . :
rJMSF043I20- TCAACCCAGAATATGATAGGGAAACCACTTCGTCATTAGACACATCGAGGGTACCATCTT
rJMSF014E19- TCAACCCAGAATATGATAGGGAAACCACTTCGTCATTAGACACATCGAGGGTACCATCTT
                      ____________________________________________________________
consensus TCAACCCAGAATATGATAGGGAAACCACTTCGTCATTAGACACATCGAGGGTACCATCTT
 
. : . : . : . : . : . :
rJMSF043I20- CTGAAACCTTGATGTCAGGCCTTCCAAATAATGCTTGTGTCTGCTTTTCTATCACAGAAA
rJMSF014E19- CTGAAACCTTGATGTCAGGCCTTCCAAATAATGCTTGTGTCTGCTTTTCTATCACAGAAA
                      ____________________________________________________________
consensus CTGAAACCTTGATGTCAGGCCTTCCAAATAATGCTTGTGTCTGCTTTTCTATCACAGAAA
 
. : . : . : . : . : . :
rJMSF043I20- GTGCTTCTTTAGATCTTAAGGTAGCATATCTCTGAAGGGTCTCTGCATCCAAATACATTA
rJMSF014E19- GTGCTTCTTTAGATCTTAAGGTAGCATATCTCTGAAGGGTCTCTGCATCCAAATACATTA
                      ____________________________________________________________
consensus GTGCTTCTTTAGATCTTAAGGTAGCATATCTCTGAAGGGTCTCTGCATCCAAATACATTA
 
. : . : . : . : . : . :
rJMSF043I20- CATAGGATCTCAACCTATATGATTTACTACCATCAGTGACTGAGCCCATTAAACCTTCTG
rJMSF014E19- CATAGGATCTCAACCTATATGATTTACTACCATCAGTGACTGAGCCCATTAAACCTTCTG
                      ____________________________________________________________
consensus CATAGGATCTCAACCTATATGATTTACTACCATCAGTGACTGAGCCCATTAAACCTTCTG
 
. : . : . : . : . : . :
rJMSF043I20- TATCGACATCCTCAGGTTCAATCACTATTAATGAATCTGGATCCCAGAGTTGATTTCCAG
rJMSF014E19- TATCGACATCCTCAGGTTCAATCACTATTAATGAATCTGGATCCCAGAGTTGATTTCCAG
                      ____________________________________________________________
consensus TATCGACATCCTCAGGTTCAATCACTATTAATGAATCTGGATCCCAGAGTTGATTTCCAG
 
. : . : . : . : . : . :
rJMSF043I20- CAGGCTGTTCAGGTCGTGGTTTGCCCAAGAAACCTTCAGGAAGGGTATTCATAGATCTTT
rJMSF014E19- CAGGCTGTTCAGGTCGTGGTTTGCCCAAGAAACCTTCAGGAAGGGTATTCATAGATCTTT
                      ____________________________________________________________
consensus CAGGCTGTTCAGGTCGTGGTTTGCCCAAGAAACCTTCAGGAAGGGTATTCATAGATCTTT
 
. : . : . : . : . : . :
rJMSF043I20- CAAGTTGATAACGCTGATCAACCCTTTTGAGGAAGTATCCATACATTATAGAGGCAGCAT
rJMSF014E19- CAAGTTGATAACGCTGATCAACCCTTTTGAGGAAGTATCCATACATTATAGAGGCAGCAT
JMSF043I20+ AGAGGCAGCAT
                      ____________________________________________________________
consensus CAAGTTGATAACGCTGATCAACCCTTTTGAGGAAGTATCCATACATTATAGAGGCAGCAT
 
. : . : . : . : . : . :
rJMSF043I20- AAAGTTTCCCGAGTTTGATTTTACTGATTTGAACAATGTTGTC-AAAGGCCCTACATCAC
rJMSF014E19- AAAGTTTCCCGAGTTTGATTTTACTGATTTGAACAATGTTGTCAAAAGGCCCTACATCAC
JMSF043I20+ AAAGTTTCCCGAGTTTGATTTTACTGATTTGAACAATGNTGTCAAAAGGCCCTACATCAC
                      ____________________________________________________________
consensus AAAGTTTCCCGAGTTTGATTTTACTGATTTGAACAATGTTGTCAAAAGGCCCTACATCAC
 
. : . : . : . : . : . :
rJMSF043I20- GTTCACCT
rJMSF014E19- GTTCACCTAGAACCAGAGAAAGGTGGCTAACTATCATTTCAAAAGCCTCAGGAGAGTGCA
JMSF043I20+ GTTCACCTAGAACCAGAGAAAGGTGGCTAACTATCATTTCAAAAGCCTCAGGAGAGTGCA
                      ____________________________________________________________
consensus GTTCACCTAGAACCAGAGAAAGGTGGCTAACTATCATTTCAAAAGCCTCAGGAGAGTGCA
 
. : . : . : . : . : . :
rJMSF014E19- CAGATTCNAGCTTCTGCTCTTGATTAGGCCAAAAATCCACTCTTCC
JMSF043I20+ CAGATTCAAGCTTCTGCTCTTGATTAGGCCAAAAATCCACTCTTCCAGTGGGATCTGAGG
                      ____________________________________________________________
consensus CAGATTCAAGCTTCTGCTCTTGATTAGGCCAAAAATCCACTCTTCCAGTGGGATCTGAGG
 
. : . : . : . : . : . :
JMSF043I20+ TTGCTGATATCTTTGGAATCATTGATATATCTTTGTCTATGAACTTATGTACAACTATTG
                      ____________________________________________________________
consensus TTGCTGATATCTTTGGAATCATTGATATATCTTTGTCTATGAACTTATGTACAACTATTG
 
. : . : . : . : . : . :
JMSF043I20+ AGTATAAAATCTCCACTAGTGCTTTTCGCCTTTCTTTCTCTCTCACTTCAGCTATTCTCT
                      ____________________________________________________________
consensus AGTATAAAATCTCCACTAGTGCTTTTCGCCTTTCTTTCTCTCTCACTTCAGCTATTCTCT
 
. : . : . : . : . : . :
JMSF043I20+ TATAGAGCAAATCTTGAGATGGAGGTAGTTTTTCTTTTTTCTGTTCATCCTTTTCATTCT
                      ____________________________________________________________
consensus TATAGAGCAAATCTTGAGATGGAGGTAGTTTTTCTTTTTTCTGTTCATCCTTTTCATTCT
 
. : . : . : . : . : . :
JMSF043I20+ GAAGATTCTCAAGCTGCTGATCAATAGCCGCCAGGAGCAGATGAGGATTGGTTTGCAATG
                      ____________________________________________________________
consensus GAAGATTCTCAAGCTGCTGATCAATAGCCGCCAGGAGCAGATGAGGATTGGTTTGCAATG
 
. : . : . : . : . : . :
JMSF043I20+ TTTGTTCCAAAAACTGACCAATGGGAGACTCCAACTGAAGAGGAGCAAATGGGACTGAAT
                      ____________________________________________________________
consensus TTTGTTCCAAAAACTGACCAATGGGAGACTCCAACTGAAGAGGAGCAAATGGGACTGAAT
 
. : . : . : . : . : . :
JMSF043I20+ CACCACCCGAATTTCCTGATGCTCTTACTTTTAATCTTCGGGTTTGAGACCTATCTTGTC
                      ____________________________________________________________
consensus CACCACCCGAATTTCCTGATGCTCTTACTTTTAATCTTCGGGTTTGAGACCTATCTTGTC
 
. : . : . : . : . : . :
JMSF043I20+ CATTTTTTAGCTTTCGAACAGAAAATGATAGATATCCAGTGGGGAAAGCAGGGGAGAAGA
JMSF014E19+ AAGA
                      ____________________________________________________________
consensus CATTTTTTAGCTTTCGAACAGAAAATGATAGATATCCAGTGGGGAAAGCAGGGGAGAAGA
 
. : . : . : . : . : . :
JMSF043I20+ GAGACTTGGTGGAGTCTGAGAATGAGCGGAAATGATTGAATTCGTAGGGGAGCTTGCAAC
JMSF014E19+ GAGACTTGGTGGAGTCTGAGAATGAGCGGAAATGATTGAATTCGTAGGGGAGCTTGCAAC
                      ____________________________________________________________
consensus GAGACTTGGTGGAGTCTGAGAATGAGCGGAAATGATTGAATTCGTAGGGGAGCTTGCAAC
 
. : . : . : . : . : . :
JMSF043I20+ CGCCGGCAGCTGTGGTTGCCGTTGACGGAAGAACCACCGGCGGCGCATCAGCCAATATGC
JMSF014E19+ CGCCGGCAGCTGTGGTTGCCGTTGACGGAAGAACCACCGGCGGCGCATCAGCCAATATGC
                      ____________________________________________________________
consensus CGCCGGCAGCTGTGGTTGCCGTTGACGGAAGAACCACCGGCGGCGCATCAGCCAATATGC
 
. : . : . : . : . : . :
JMSF043I20+ CGGAAATTTGCATCGCGTAAGTGGTTACGACAGGGCGGACGACTGAT
JMSF014E19+ CGGAAATTTGCATCGCGTAAGTGGTTACGACAGGGCGGACGACTGATAATCTTCTTCGTG
                      ____________________________________________________________
consensus CGGAAATTTGCATCGCGTAAGTGGTTACGACAGGGCGGACGACTGATAATCTTCTTCGTG
 
. : . : . : . : . : . :
JMSF014E19+ GTGGTGGTGCTGGTCTTGTTTCCGTTATTCTCGTGAGAGAAAGATGTTACGTGGCCACCC
                      ____________________________________________________________
consensus GTGGTGGTGCTGGTCTTGTTTCCGTTATTCTCGTGAGAGAAAGATGTTACGTGGCCACCC