Contig 007813:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003B01Sequence138007813 (5)ref|XP_002267459.1|2e-07PREDICTED: oxalate--CoA ligase-like [Vitis vinifera]711010962 (5)ref|XP_009601805.1|2e-77PREDICTED: 4-coumarate--CoA ligase-like 10 [Nicotiana tomentosiformis]
JMSF013M16Sequence427007813 (5)gb|AHM88425.1|9e-444CL13 [Fraxinus mandshurica]701010962 (5)ref|XP_009601805.1|2e-89PREDICTED: 4-coumarate--CoA ligase-like 10 [Nicotiana tomentosiformis]
JMSF013P24Sequence279007813 (5)gb|AHM88425.1|7e-234CL13 [Fraxinus mandshurica]674010962 (5)ref|XP_009601805.1|4e-84PREDICTED: 4-coumarate--CoA ligase-like 10 [Nicotiana tomentosiformis]
JMSF044B05Sequence759007813 (5)ref|XP_004234395.1|2e-99PREDICTED: oxalate--CoA ligase-like [Solanum lycopersicum]732010962 (5)ref|XP_009601805.1|1e-103PREDICTED: 4-coumarate--CoA ligase-like 10 [Nicotiana tomentosiformis]
JMSF051P24Sequence648007813 (5)gb|AFP66956.1|2e-79acyl-CoA synthetase, partial [Capsicum annuum]722010962 (5)ref|XP_009601805.1|1e-98PREDICTED: 4-coumarate--CoA ligase-like 10 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMSF044B05+                         AGCTCAACATCCCCGCGATCAACCCGTGAACATGAAACAGAGGCAA
                      ____________________________________________________________
consensus                           AGCTCAACATCCCCGCGATCAACCCGTGAACATGAAACAGAGGCAA
 
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JMSF044B05+           CACAATAACCGTCGAGTCCGACTCGGTGAGTTTGTAAACCGACTTAATATTGTTCACTGA
                      ____________________________________________________________
consensus             CACAATAACCGTCGAGTCCGACTCGGTGAGTTTGTAAACCGACTTAATATTGTTCACTGA
 
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JMSF044B05+           AGAAGCCAAGTTGAACTGAGTCAGGGGAACGCCCTTGGGGCGGCTCGTGGTGCCGGAGGT
JMSF051P24+                  AAGTTGAACTGAGTCAGGGGAACGCCCTTGGGGCGGCTCGTGGTGCCGGAGGT
                      ____________________________________________________________
consensus             AGAAGCCAAGTTGAACTGAGTCAGGGGAACGCCCTTGGGGCGGCTCGTGGTGCCGGAGGT
 
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JMSF044B05+           ATGCAGGAACAGCGAAACATCAGACGGATCATTAACGAGTTCCGACACCGCGTCCGAGTC
JMSF051P24+           ATGCAGGAACAGCGAAACATCAGACGGATCATTAACGAGTTCCGACACCGCGTCCGAGTC
                      ____________________________________________________________
consensus             ATGCAGGAACAGCGAAACATCAGACGGATCATTAACGAGTTCCGACACCGCGTCCGAGTC
 
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JMSF044B05+           CGACTCGGGATGAGCCGGGAAGAGAGCAATATCCGACTCAGCGCCGGACAGAGTAGCGGT
JMSF051P24+           CGACTCGGGATGAGCCGGGAAGAGAGCAATATCCGACTCAGCGCCGGACAGAGTAGCGGT
                      ____________________________________________________________
consensus             CGACTCGGGATGAGCCGGGAAGAGAGCAATATCCGACTCAGCGCCGGACAGAGTAGCGGT
 
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JMSF044B05+           TACAGCCGGAATACTGAGCTTCGCAGCCGCGGCTTGAGCCGCCTCATTTCCTTCCTTCGG
JMSF051P24+           TACAGCCGGAATACTGAGCTTCGCAGCCGCGGCTTGAGCCGCCTCATTTCCTTCCTTCGG
JMSF013M16+                                                                CCTTCGG
                      ____________________________________________________________
consensus             TACAGCCGGAATACTGAGCTTCGCAGCCGCGGCTTGAGCCGCCTCATTTCCTTCCTTCGG
 
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JMSF044B05+           AATTAACAGCATCTTCGACTCTGAATCGGACAAGTAAAACTCAAACTCCTCCGCCGTATA
JMSF051P24+           AATTAACAGCATCTTCGACTCTGAATCGGACAAGTAAAACTCAAACTCCTCCGCCGTATA
JMSF013M16+           AATTAACAGCATCTTCGACTCTGAATCGGACAAGTAAAACTCAAACTCCTCCGCCGTATA
                      ____________________________________________________________
consensus             AATTAACAGCATCTTCGACTCTGAATCGGACAAGTAAAACTCAAACTCCTCCGCCGTATA
 
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JMSF044B05+           CGCCGCATTCAGTGGGGCCGCCGTGGCCCTCACCCGAATAACAGCCAGAAACATAATTAC
JMSF051P24+           CGCCGCATTCAGTGGGGCCGCCGTGGCCCTCACCCGAATAACAGCCAGAAACATAATTAC
JMSF013M16+           CGCCGCATTCAGTGGGGCCGCCGTGGCCCTCACCCGAATAACAGCCAGAAACATAATTAC
                      ____________________________________________________________
consensus             CGCCGCATTCAGTGGGGCCGCCGTGGCCCTCACCCGAATAACAGCCAGAAACATAATTAC
 
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JMSF044B05+           CAACTCGACGGTGTTGGGGAAGGTGAGAGCGACAACATCGCCGGGCCTAACGCCGGCGGC
JMSF051P24+           CAACTCGACGGTGTTGGGGAAGGTGAGAGCGACAACATCGCCGGGCCTAACGCCGGCGGC
JMSF013P24+                                GGTGAGAGCGACAACATCGCCGGGCCTAACGCCGGCGGC
JMSF013M16+           CAACTCGACGGTGTTGGGGAAGGTGAGAGCGACAACATCGCCGGGCCTAACGCCGGCGGC
                      ____________________________________________________________
consensus             CAACTCGACGGTGTTGGGGAAGGTGAGAGCGACAACATCGCCGGGCCTAACGCCGGCGGC
 
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JMFF003B01+                                                             TAAGGTCGAA
JMSF044B05+           GAAGAGGGAAGAAGCGGCACGTTCGACGAGGTGATGAAGGCGTGAGTGTGTAAGGTCGAA
JMSF051P24+           GAAGAGGGAAGAAGCGGCACGTTCGACGAGGTGATGAAGGCGTGAGTGTGTAAGGTCGAA
JMSF013P24+           GAAGAGGGAAGAAGCGGCACGTTCGACGAGGTGATGAAGGCGTGAGTGTGTAAGGTCGAA
JMSF013M16+           GAAGAGGGAAGAAGCGGCACGTTCGACGAGGTGATGAAGGCGTGAGTGTGTAAGGTCGAA
                      ____________________________________________________________
consensus             GAAGAGGGAAGAAGCGGCACGTTCGACGAGGTGATGAAGGCGTGAGTGTGTAAGGTCGAA
 
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JMFF003B01+           CTTGCCGGAAACGGAGATGGCTCGCCGGGAGGGGAAGTTTCCGGCGACGTGCTTCAGCAA
JMSF044B05+           CTTGCCGGAAACGGAGATGGCTCGCCGGGAGGGGAAGTTTCCGGCGACGTGCTTCAGCAA
JMSF051P24+           CTTGCCGGAAACGGAGATGGCTCGCCGGGAGGGGAAGTTTCCGGCGACGTGCTTCAGCAA
JMSF013P24+           CTTGCCGGAAACGGAGATGGCTCGCCGGGAGGGGAAGTTTCCGGCGACGTGCTTCAGCAA
JMSF013M16+           CTTGCCGGAAACGGAGATGGCTCGCCGGGAGGGGAAGTTTCCGGCGACGTGCTTCAGCAA
                      ____________________________________________________________
consensus             CTTGCCGGAAACGGAGATGGCTCGCCGGGAGGGGAAGTTTCCGGCGACGTGCTTCAGCAA
 
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JMFF003B01+           TCCGGTGAGAGTGGACGTCTCCATGCTTAGAGAATCTGCTAAGATTTCGTGAAAGAAAAT
JMSF044B05+           TCCGGTGAGAGTGGACGTCTCCATGCTTAGAGAATCTGCTAAGATTTCGTGAAAGAAAAT
JMSF051P24+           TCCGGTGAGAGTGGACGTCTCCATGCTTAGAGAATCTGCTAAGATTTCGTGAAAGAAAAT
JMSF013P24+           TCCGGTGAGAGTGGACGTCTCCATGCTTAGAGAATCTGCTAAGATTTCGTGAAAGAAAAT
JMSF013M16+           TCCGGTGAGAGTGGACGTCTCCATGCTTAGAGAATCTGCTAAGATTTCGTGAAAGAAAAT
                      ____________________________________________________________
consensus             TCCGGTGAGAGTGGACGTCTCCATGCTTAGAGAATCTGCTAAGATTTCGTGAAAGAAAAT
 
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JMFF003B01+           GAATGAAA                                                    
JMSF044B05+           GAATGAAACGGTATGGTATGGTATGGTATGGTATGGTATGGTATGATATGGT        
JMSF051P24+           GAATGAAACGGTATGGTATGGTATGGTATGGTATGGTATGGTATGATATGGT        
JMSF013P24+           GAATGAAACGGTATGGTATGGTATGGTATGGTATGGTATGGTATGATATGGT        
JMSF013M16+           GAATGAAACGGTATGGTATGGTATGGTATGGTATGGTATGGTATGATATGGTATGGGACC
                      ____________________________________________________________
consensus             GAATGAAACGGTATGGTATGGTATGGTATGGTATGGTATGGTATGATATGGTATGGGACC