clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF007L06 | Sequence | 614 | 007811 (5) | ref|XP_011087148.1| | 1e-56 | PREDICTED: NADPH:adrenodoxin oxidoreductase, mitochondrial isoform X1 [Sesamum | 637 | 010981 (6) | ref|XP_009603521.1| | 4e-61 | PREDICTED: NADPH:adrenodoxin oxidoreductase, mitochondrial isoform X3 [Nicotian |
JMFF027I14 | Sequence | 613 | 007811 (5) | ref|XP_011087148.1| | 6e-68 | PREDICTED: NADPH:adrenodoxin oxidoreductase, mitochondrial isoform X1 [Sesamum | 705 | 010981 (6) | ref|XP_009603521.1| | 7e-60 | PREDICTED: NADPH:adrenodoxin oxidoreductase, mitochondrial isoform X3 [Nicotian |
JMSF006B02 | Sequence | 307 | 007811 (5) | ref|XP_009603519.1| | 1e-27 | PREDICTED: NADPH:adrenodoxin oxidoreductase, mitochondrial isoform X1 [Nicotian | |||||
JMSF013C23 | Sequence | 225 | 007811 (5) | ref|XP_009603520.1| | 2e-25 | PREDICTED: NADPH:adrenodoxin oxidoreductase, mitochondrial isoform X2 [Nicotian | 763 | 010981 (6) | ref|XP_009603521.1| | 2e-60 | PREDICTED: NADPH:adrenodoxin oxidoreductase, mitochondrial isoform X3 [Nicotian |
JMSF034A10 | Sequence | 668 | 007811 (5) | ref|XP_011087148.1| | 5e-70 | PREDICTED: NADPH:adrenodoxin oxidoreductase, mitochondrial isoform X1 [Sesamum | 763 | 010981 (6) | ref|XP_009603521.1| | 2e-60 | PREDICTED: NADPH:adrenodoxin oxidoreductase, mitochondrial isoform X3 [Nicotian |
This contig is upended
. : . : . : . : . : . :
JMSF034A10+ CTGGTCCACG
____________________________________________________________
consensus CTGGTCCACG
. : . : . : . : . : . :
JMFF027I14+ AGAGCAGCCAAAGCATGGGA
JMFF007L06+ AGAGCAGCCAAAGCATGGGA
JMSF034A10+ TCTGCCAACCACATAAACTTTTCTTATAGAGCTTTCTTCTAGAGCAGCCAAAGCATGGGA
____________________________________________________________
consensus TCTGCCAACCACATAAACTTTTCTTATAGAGCTTTCTTCTAGAGCAGCCAAAGCATGGGA
. : . : . : . : . : . :
JMFF027I14+ AGAAATATCAGTTTTTGCCAACTCAGAGGTTGATCGTAAAAGTACACGGGCCACATCAAG
JMFF007L06+ AGAAATATCAGTTTTTGCCAACTCAGAGGTTGATNGTAAAAGTACACGGGCCACATCAAG
JMSF034A10+ AGAAATATCAGTTTTTGCCAACTCAGAGGTTGATCGTAAAAGTACACGGGCCACATCAAG
____________________________________________________________
consensus AGAAATATCAGTTTTTGCCAACTCAGAGGTTGATCGTAAAAGTACACGGGCCACATCAAG
. : . : . : . : . : . :
JMFF027I14+ AGCTACATTTCCCTGACCAACAACAACAGCAGTATCTGTGTTCTTCAAGTCTGGAGCCAA
JMFF007L06+ AGNTACATTTCCNTGACCAACAACAACAGCAGTATCTGTGTTCTTCAAGTCTGGAGCCAA
JMSF034A10+ AGCTACATTTCCCTGACCAACAACAACAGCAGTATCTGTGTTCTTCAAGTCTGGAGCCAA
____________________________________________________________
consensus AGCTACATTTCCCTGACCAACAACAACAGCAGTATCTGTGTTCTTCAAGTCTGGAGCCAA
. : . : . : . : . : . :
JMFF027I14+ GTTTCTGCAGTCTGGGTGCCCATTATACCACCAGACAAACTCTCTAGCAGAATATATCCC
JMFF007L06+ GTTTCTGCAGTCTGGGTGCCCATTATACCACCAGACAAACTCTCTAGCAGAATATATCCC
JMSF034A10+ GTTTCTGCAGTCTGGGTGCCCATTATACCACCAGACAAACTCTCTAGCAGAATATATCCC
____________________________________________________________
consensus GTTTCTGCAGTCTGGGTGCCCATTATACCACCAGACAAACTCTCTAGCAGAATATATCCC
. : . : . : . : . : . :
JMFF027I14+ TGCCAAATCTTCTCCAGGAATGCCAAGAGCTCTGTCACTTTCAGCACCATAGCAAAGCAC
JMFF007L06+ TGCCAAATCTTCTCCAGGAATGCCAAGAGCTCTGTCACTTTCAGCACCATAGCAAAGCAC
JMSF034A10+ TGCCAAATCTTCTCCAGGAATGCCAAGAGCTCTGTCACTTTCAGCACCATAGCAAAGCAC
____________________________________________________________
consensus TGCCAAATCTTCTCCAGGAATGCCAAGAGCTCTGTCACTTTCAGCACCATAGCAAAGCAC
. : . : . : . : . : . :
JMFF027I14+ TACCACATCATACAGATCACGTAGCTCAGACAAAGATACCGAAGATCCAAGAGAGACATT
JMFF007L06+ TACCACATCATACAGATCACGTAGCTCAGACAAAGATACCGAAGATCCAAGAGAGACATT
JMSF034A10+ TACCACATCATACAGATCACGTAGCTCAGACAAAGATACCGAAGATCCAAGAGAGACATT
____________________________________________________________
consensus TACCACATCATACAGATCACGTAGCTCAGACAAAGATACCGAAGATCCAAGAGAGACATT
. : . : . : . : . : . :
JMFF027I14+ CCCAAGGAACGAGCAGCGGCCATTTTGAACTATCCGAGAAAACTGGTTTGTCACAGTCTG
JMFF007L06+ CCCAAGGAACGAGCAGCGGCCATTTTGAACTATCCGAGAAAACTGGTTTGTCACAGTCTG
JMSF034A10+ CCCAAGGAACGAGCAGCGGCCATTTTGAACTATCCGAGAAAACTGGTTTGTCACAGTCTG
JMSF006B02+ CCCAAGGAACGAGCAGCGGCCATTTTGAACTATCCGAGAAAACTGGTTTGTCACAGTCTG
____________________________________________________________
consensus CCCAAGGAACGAGCAGCGGCCATTTTGAACTATCCGAGAAAACTGGTTTGTCACAGTCTG
. : . : . : . : . : . :
JMFF027I14+ TTCCAAATATTCTTGGTTTCAGGATGATCTGGAGCAACACCAGATCGGACTAACCCAAAC
JMFF007L06+ TTCCAAATATTCTTGGTTTCAGGATGATCTGGAGCAACACCAGATCGGACTAACCCAAAC
JMSF034A10+ TTCCAAATATTCTTGGTTTCAGGATGATCTGGAGCAACACCAGATCGGACTAACCCAAAC
JMSF006B02+ TTCCAAATATTCTTGGTTTCAGGATGATCTGGAGCAACACCAGATCGGACTAACCCAAAC
JMSF013C23+ GTTTCAGGATGATCTGGAGCAACACCAGATCGGACTAACCCAAAC
____________________________________________________________
consensus TTCCAAATATTCTTGGTTTCAGGATGATCTGGAGCAACACCAGATCGGACTAACCCAAAC
. : . : . : . : . : . :
JMFF027I14+ GGCGTCGGTAAGCGGTCGATTATATCGACTTGGGCGCCTTCATGCGCTTTCAGAATCTTG
JMFF007L06+ GGCGTCGGTAAGCGGTCGATTATATCGACTTGGGCGCCTTCATGCGCTTTCAGAATCTTG
JMSF034A10+ GGCGTCGGTAAGCGGTCGATTATATCGACTTGGGCGCCTTCATGCGCTTTCAGAATCTTG
JMSF006B02+ GGCGTCGGTAAGCGGTCGATTATATCGACTTGGGCGCCTTCATGCGCTTTCAGAATCTTG
JMSF013C23+ GGCGTCGGTAAGCGGTCGATTATATCGACTTGGGCGCCTTCATGCGCTTTCAGAATCTTG
____________________________________________________________
consensus GGCGTCGGTAAGCGGTCGATTATATCGACTTGGGCGCCTTCATGCGCTTTCAGAATCTTG
. : . : . : . : . : . :
JMFF027I14+ TCGGCGGTGTAAAATCCGGCGGGTCCACTACCGACGATACAGACTCGTGGTGAGCTGGAA
JMFF007L06+ TCGGCGGTGTAAAATCCGGCGGGTCCACTACCGACGATACAGACTCGTGGTGAGCTGGAA
JMSF034A10+ TCGGCGGTGTAAAATCCGGCGGGTCCACTACCGACGATACAGACTCGTGGTGAGCTGGAA
JMSF006B02+ TCGGCGGTGTAAAATCCGGCGGGTCCACTACCGACGATACAGACTCGTGGTGAGCTGGAA
JMSF013C23+ TCGGCGGTGTAAAATCCGGCGGGTCCACTACCGACGATACAGACTCGTGGTGAGCTGGAA
____________________________________________________________
consensus TCGGCGGTGTAAAATCCGGCGGGTCCACTACCGACGATACAGACTCGTGGTGAGCTGGAA
. : . : . : . : . : . :
JMFF027I14+ GAAACGGTTGTAAAGCTTCGAGAAAGGCATCTCAACATTCTCATAACGGCCAT
JMFF007L06+ GAAACGGTTGTAAAGCTTCGAGAAAGGCATCTCAACATTCTCATAACGGCCAT
JMSF034A10+ GAAACGGTTGTAAAGCTTCGAGAAAGGCATCTCAACATTCTCGTAAAGGCCAT
JMSF006B02+ GAAACGGTTGTAAAGCTTCGAGAAAGGCATCTCAACATTCTCGTAAAGGCCAT
JMSF013C23+ GAAACGGTTGTAAAGCTTCGAGAAAGGCATCTCAACATTCTCGTAAAGGCCATATCTGTC
____________________________________________________________
consensus GAAACGGTTGTAAAGCTTCGAGAAAGGCATCTCAACATTCTCGTAAAGGCCATATCTGTC