Contig 007805:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003M16Sequence623007805 (9)emb|CDO97825.1|3e-103unnamed protein product [Coffea canephora]
JMFF009D15Sequence489007805 (9)ref|XP_010459324.1|1e-64PREDICTED: oligouridylate-binding protein 1B [Camelina sativa]
JMFF010F22Sequence581007805 (9)ref|XP_010459324.1|5e-74PREDICTED: oligouridylate-binding protein 1B [Camelina sativa]726009921 (6)gb|KDP40672.1|3e-77hypothetical protein JCGZ_24671 [Jatropha curcas]
JMFF010O10Sequence495007805 (9)ref|XP_010459324.1|4e-66PREDICTED: oligouridylate-binding protein 1B [Camelina sativa]779009921 (6)gb|KDP40672.1|6e-89hypothetical protein JCGZ_24671 [Jatropha curcas]
JMFF015O17Sequence495007805 (9)ref|XP_010459324.1|4e-66PREDICTED: oligouridylate-binding protein 1B [Camelina sativa]657009921 (6)gb|KDP40672.1|6e-61hypothetical protein JCGZ_24671 [Jatropha curcas]
JMFF023C06Sequence479007805 (9)ref|XP_010459324.1|3e-66PREDICTED: oligouridylate-binding protein 1B [Camelina sativa]
JMSF012G22Sequence461007805 (9)ref|XP_006465882.1|7e-44PREDICTED: nucleolysin TIAR-like [Citrus sinensis]759009921 (6)gb|KDP40672.1|1e-80hypothetical protein JCGZ_24671 [Jatropha curcas]
JMSF013P21Sequence301007805 (9)ref|XP_010459324.1|3e-15PREDICTED: oligouridylate-binding protein 1B [Camelina sativa]603009921 (6)gb|KDP40672.1|8e-50hypothetical protein JCGZ_24671 [Jatropha curcas]
JMSF030N20Sequence624007805 (9)emb|CDO97825.1|4e-105unnamed protein product [Coffea canephora]646009921 (6)gb|KDP40672.1|3e-64hypothetical protein JCGZ_24671 [Jatropha curcas]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF030N20+ CCTAGAGCGCCCAGTCTTCTGATCCCACATGATTCTT
JMFF003M16+ TAGAGCGCCCAGTCTTCTGATCCCACATGATTCTT
                      ____________________________________________________________
consensus CCTAGAGCGCCCAGTCTTCTGATCCCACATGATTCTT
 
. : . : . : . : . : . :
JMSF030N20+ GCATCAGAACAGCTAGGGAATGTGGAGAAGCAAGCAAATAACATGGCATCAGTAACTTCA
JMFF003M16+ GCATCAGAACAGCTAGGGAATGTGGAGAAGCAAGCAAATAACATGGCATCAGTAACTTCA
                      ____________________________________________________________
consensus GCATCAGAACAGCTAGGGAATGTGGAGAAGCAAGCAAATAACATGGCATCAGTAACTTCA
 
. : . : . : . : . : . :
JMSF030N20+ GGGCTGAGGTCACCTACAAATATATTGAAATGGCTAGAAGTATCTTCCCTCTGACCACTA
JMFF003M16+ GGGCTGAGGTCACCTACAAATATATTGAAATGGCTAGAAGTATCTTCCCTCTGACCACTA
JMFF015O17+ TCTGACCACTA
JMFF010O10+ TCTGACCACTA
JMFF009D15+ CACTA
JMFF023C06+ CTCTGACCACTA
JMFF010F22+ AATATATTGAAATGGCTAGAAGTATCTTCCCTCTGACCACTA
                      ____________________________________________________________
consensus GGGCTGAGGTCACCTACAAATATATTGAAATGGCTAGAAGTATCTTCCCTCTGACCACTA
 
. : . : . : . : . : . :
JMSF030N20+ GCATATGCCCAGTTCACTTTAATAGGCTGGCCAAACAGATGCCTGCCATTCAGCGACATT
JMFF003M16+ GCATATGCCCAGTTCACTTTAATAGGCTGGCCAAACAGATGCCTGCCATTCAGCGACATT
JMFF015O17+ GCATATGCCCAGTTCACTTTAATAGGCTGGCCAAACAGATGCCTGCCATTCAGCGACATT
JMFF010O10+ GCATATGCCCAGTTCACTTTAATAGGCTGGCCAAACAGATGCCTGCCATTCAGCGACATT
JMFF009D15+ GCATATGCCCAGTTCACTTTAATAGGCTGGCCAAACAGATGCCTGCCATTCAGCGACATT
JMFF023C06+ GCATATGCCCAGTTCACTTTAATAGGCTGGCCAAACAGATGCCTGCCATTCAGCGACATT
JMFF010F22+ GCATATGCCCAGTTCACTTTAATAGGCTGGCCAAACAGATGCCTGCCATTCAGCGACATT
                      ____________________________________________________________
consensus GCATATGCCCAGTTCACTTTAATAGGCTGGCCAAACAGATGCCTGCCATTCAGCGACATT
 
. : . : . : . : . : . :
JMSF030N20+ ATAGCAAGGCCAGCAGATCTACGGTCATAGTAATGAATGAAACCGTAGGATGACTTATCC
JMFF003M16+ ATAGCAAGGCCAGCAGATCTACGGTCATAGTAATGAATGAAACCGTAGGATGACTTATCC
JMFF015O17+ ATAGCAAGGCCAGCAGATCTACGGTCATAGTAATGAATGAAACCGTAGGATGACTTATCC
JMFF010O10+ ATAGCAAGGCCAGCAGATCTACGGTCATAGTAATGAATGAAACCGTAGGATGACTTATCC
JMFF009D15+ ATAGCAAGGCCAGCAGATCTACGGTCATAGTAATGAATGAAACCGTAGGATGACTTATCC
JMFF023C06+ ATAGCAAGGCCAGCAGATCTACGGTCATAGTAATGAATGAAACCGTAGGATGACTTATCC
JMFF010F22+ ATAGCAAGGCCAGCAGATCTACGGTCATAGTAATGAATGAAACCGTAGGATGACTTATCC
JMSF012G22+ TACGGTCATAGTAATGAATGAAACCGTAGGATGACTTATCC
                      ____________________________________________________________
consensus ATAGCAAGGCCAGCAGATCTACGGTCATAGTAATGAATGAAACCGTAGGATGACTTATCC
 
. : . : . : . : . : . :
JMSF030N20+ TTTCGTATAAGCTTGCATCCTTCAATAGGACCAGTGCTAGCAAAAACTTCCTGCAGAAGA
JMFF003M16+ TTTCGTATAAGCTTGCATCCTTCAATAGGACCAGTGCTAGCAAAAACTTCCTGCAGAAGA
JMFF015O17+ TTTCGTATAAGCTTGCATCCTTCAATAGGACCAGTGCTAGCAAAAACTTCCTGCAGAAGA
JMFF010O10+ TTTCGTATAAGCTTGCATCCTTCAATAGGACCAGTGCTAGCAAAAACTTCCTGCAGAAGA
JMFF009D15+ TTTCGTATAAGCTTGCATCCTTCAATAGGACCAGTGCTAGCAAAAACTTCCTGCAGAAGA
JMFF023C06+ TTTCGTATAAGCTTGCATCCTTCAATAGGACCAGTGCTAGCAAAAACTTCCTGCAGAAGA
JMFF010F22+ TTTCGTATAAGCTTGCATCCTTCAATAGGACCAGTGCTAGCAAAAACTTCCTGCAGAAGA
JMSF012G22+ TTTCGTATAAGCTTGCATCCTTCAATAGGACCAGTGCTAGCAAAAACTTCCTGCAGAAGA
                      ____________________________________________________________
consensus TTTCGTATAAGCTTGCATCCTTCAATAGGACCAGTGCTAGCAAAAACTTCCTGCAGAAGA
 
. : . : . : . : . : . :
JMSF030N20+ GGTTCAGTCACCTGTGGGTGAATATTCCCAACATACACACTGCGGCATGTGCTTGGATCA
JMFF003M16+ GGTTCAGTCACCTGTGGGTGAATATTCCCAACATACACACTGCGGCATGTGCTTGGATCA
JMFF015O17+ GGTTCAGTCACCTGTGGGTGAATATTCCCAACATACACACTGCGGCATGTGCTTGGATCA
JMFF010O10+ GGTTCAGTCACCTGTGGGTGAATATTCCCAACATACACACTGCGGCATGTGCTTGGATCA
JMFF009D15+ GGTTCAGTCACCTGTGGGTGAATATTCCCAACATACACACTGCGGCATGTGCTTGGATCA
JMFF023C06+ GGTTCAGTCACCTGTGGGTGAATATTCCCAACATACACACTGCGGCATGTGCTTGGATCA
JMSF013P21+ CCCAACATACACACTGCGGCATGTGCTTGGATCA
JMFF010F22+ GGTTCAGTCACCTGTGGGTGAATATTCCCAACATACACACTGCGGCATGTGCTTGGATCA
JMSF012G22+ GGTTCAGTCACCTGTGGGTGAATATTCCCAACATACACACTGCGGCATGTGCTTGGATCA
                      ____________________________________________________________
consensus GGTTCAGTCACCTGTGGGTGAATATTCCCAACATACACACTGCGGCATGTGCTTGGATCA
 
. : . : . : . : . : . :
JMSF030N20+ AACCCAGGAGGCAAATTTCCACTTGGTATTGGCTCAATCTGAGGAGCAGCTAAGAGGCCC
JMFF003M16+ AACCCAGGAGGCAAATTTCCACTTGGTATTGGCTCAATCGGAGGAGCAGCTAAGAGGCCC
JMFF015O17+ AACCCAGGAGGCAAATTTCCACTTGGTATTGGCTCAATCGGAGGAGCAGCTAAGAGGCCC
JMFF010O10+ AACCCAGGAGGCAAATTTCCACTTGGTATTGGCTCAATCGGAGGAGCAGCTAAGAGGCCC
JMFF009D15+ AACCCAGGAGGCAAATTTCCACTTGGTATTGGCTCAATCGGAGGAGCAGCTAAGAGGCCC
JMFF023C06+ AACCCAGGAGGCAAATTTCCACTTGGTATTGGCTCAATCGGAGGAGCAGCTAAGAGGCCC
JMSF013P21+ AACCCAGGAGGCAAATTTCCACTTGGTATTGGCTCAATCGGAGGAGCAGCTAAGAGGCCC
JMFF010F22+ AACCCAGGAGGCAAATTTCCACTTGGTATTGGCTCAATCGGAGGAGCAGCTAAGAGGCCC
JMSF012G22+ AACCCAGGAGGCAAATTTCCACTTGGTATTGGCTCAATCGGAGGAGCAGCTAAGAGGCCC
                      ____________________________________________________________
consensus AACCCAGGAGGCAAATTTCCACTTGGTATTGGCTCAATCGGAGGAGCAGCTAAGAGGCCC
 
. : . : . : . : . : . :
JMSF030N20+ GGGTGATAGAGAGACTGTTGTTGCAGGAGAGCTTGTTGCATCAAGGCTTGTTGTTGCTGC
JMFF003M16+ GGGTGATAGAGAGACTGTTGTTGCAGGAGAGCTTGTTGCATCAAGGCTTGTTGTTGCTGC
JMFF015O17+ GGGTGATAGAGAGACTGTTGTTGCAGGAGAGCTTGTTGCATCAAGGCTTGTTGTTGCTGC
JMFF010O10+ GGGTGATAGAGAGACTGTTGTTGCAGGAGAGCTTGTTGCATCAAGGCTTGTTGTTGCTGC
JMFF009D15+ GGGTGATAGAGAGACTGTTGTTGCAGGAGAGCTTGTTGCATCAAGGCTTGTTGTTGCTGC
JMFF023C06+ GGGTGATAGAGAGACTGTTGTTGCAGGAGAGCTTGTTGCATCAAGGCTTGTTGTTGCTGC
JMSF013P21+ GGGTGATAGAGAGACTGTTGTTGCAGGAGAGCTTGTTGCATCAAGGCTTGTTGTTGCTGC
JMFF010F22+ GGGTGATAGAGAGACTGTTGTTGCAGGAGAGCTTGTTGCATCAAGGCTTGTTGTTGCTGC
JMSF012G22+ GGGTGATAGAGAGACTGTTGTTGCAGGAGAGCTTGTTGCATCAAGGCTTGTTGTTGCTGC
                      ____________________________________________________________
consensus GGGTGATAGAGAGACTGTTGTTGCAGGAGAGCTTGTTGCATCAAGGCTTGTTGTTGCTGC
 
. : . : . : . : . : . :
JMSF030N20+ TTCAGCCTCTGGTGCTGCATTTTCAAGACCGCCGATCGGGTCAATCAATTGACGGGAAGG
JMFF003M16+ TTCAGCCTCTGGTGCTGCATTTTCAAGACCGCCGATCGGGTCAATCAATTGACGGGAAGG
JMFF015O17+ TTCAGCCTCTGGTGCTGCATTTTCAAGACCGCCGATCGGGTCAATCAATTGACGGGAAGG
JMFF010O10+ TTCAGCCTCTGGTGCTGCATTTTCAAGACCGCCGATCGGGTCAATCAATTGACGGGAAGG
JMFF009D15+ TTCAGCCTCTGGTGCTGCATTTTCAAGACCGCCGATCGGGTCAATCAATTGACGGGAAGG
JMFF023C06+ TTCAGCCTCTGGTGCTGCATTTTCAAGACCGCCGATCGGGTCAATCAATTGACGGGAAGG
JMSF013P21+ TTCAGCCTCTGGTGCTGCATTTTCAAGACCGCCGATCGGGTCAATCAATTGACGGGAAGG
JMFF010F22+ TTCAGCCTCTGGTGCTGCATTTTCAAGACCGCCGATCGGGTCAATCAATTGACGGGAAGG
JMSF012G22+ TTCAGCCTCTGGTGCTGCATTTTCAAGACCGCCGATCGGGTCAATCAATTGACGGGAAGG
                      ____________________________________________________________
consensus TTCAGCCTCTGGTGCTGCATTTTCAAGACCGCCGATCGGGTCAATCAATTGACGGGAAGG
 
. : . : . : . : . : . :
JMSF030N20+ TGAATTTCCCGGGTCCGAACGATTTTGCGGGGAGAGAGAGA
JMFF003M16+ TGAATTTCCCGGGTCCGAACGATTTTGCGGGGAGAGAGAGAGAAACC
JMFF015O17+ TGAATTTCCCGGGTCCGAACGATTTTGCGGGGAGAGAGAGAGAAACCAGAGAGGGTAGGG
JMFF010O10+ TGAATTTCCCGGGTCCGAACGATTTTGCGGGGAGAGAGAGAGAAACCAGAGAGGGTAGGG
JMFF009D15+ TGAATTTCCCGGGTCCGAACGATTTTGCGGGGAGAGAGAGAGAAACCAGAGAGGGTAGGG
JMFF023C06+ TGAATTTCCCGGGTCCGAACGATTTTGCGGGGAGAGAGAGAGAAACC
JMSF013P21+ TGAATTTCCCGGGTCCGAACGATTTTGCGGGGAGAGAGAGAGAAACCAGAGAGGGTAGGG
JMFF010F22+ TGAATTTCCCGGGTCCGAACGATTTTGCGGGGAGAGAGAGAGAAACCAGAGAGGGTAGGG
JMSF012G22+ TGAATTTCCCGGGTCCGAACGATTTTGCGGGGAGAGAGAGAGAAACCAGAGAGGGTAGGG
                      ____________________________________________________________
consensus TGAATTTCCCGGGTCCGAACGATTTTGCGGGGAGAGAGAGAGAAACCAGAGAGGGTAGGG
 
. : . : . : . : . : . :
JMFF015O17+ TTCC
JMFF010O10+ TTCC
JMFF009D15+ TTCC
JMSF013P21+ TTCCGAGAGTATGTTAAAAGTGAGAG
JMFF010F22+ TTCCGAGAGTATGTTAAAAGTGAGAGAGAGAAAAATATACAAAAGAAAAAAGTGAAAAT
JMSF012G22+ TTCCGAGAGTATGTTAAAAGTGAGAGAGAGAAAAATATACAAAAGAAAAAAGTGAAAATC
                      ____________________________________________________________
consensus TTCCGAGAGTATGTTAAAAGTGAGAGAGAGAAAAATATACAAAAGAAAAAAGTGAAAATC