Contig 007798:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF050E05Sequence637007798 (5)607006999 (4)
JMSF006A06Sequence256007798 (5)345013881 (6)ref|XP_009779743.1|1e-33PREDICTED: monothiol glutaredoxin-S7, chloroplastic [Nicotiana sylvestris]
JMSF011P21Sequence273007798 (5)709006999 (4)ref|XP_002325473.1|2e-43phosphatase 2C family protein [Populus trichocarpa] gb|ABK95223.1| unknown [Popu
JMSF030M17Sequence629007798 (5)664006999 (4)ref|XP_010111089.1|4e-18putative protein phosphatase 2C 33 [Morus notabilis] gb|EXC29951.1| putative pro
JMSF042D09Sequence730007798 (5)741006999 (4)ref|XP_002325473.1|9e-34phosphatase 2C family protein [Populus trichocarpa] gb|ABK95223.1| unknown [Popu

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF042D09+ TTCAAAATCAACTCTCCCAACCCTCCAC
                      ____________________________________________________________
consensus TTCAAAATCAACTCTCCCAACCCTCCAC
 
. : . : . : . : . : . :
JMFF050E05+ AATT
JMSF042D09+ NTGATCCAAACAATTCACCAGATCCAGTGCCAAATTTCAATACAAAAAAGGACTCTAATT
                      ____________________________________________________________
consensus NTGATCCAAACAATTCACCAGATCCAGTGCCAAATTTCAATACAAAAAAGGACTCTAATT
 
. : . : . : . : . : . :
JMFF050E05+ CCTTGCAGCCTCAATAAAGTAATGAGCTTTTCAATGGCAGACAACTATATATGTTAATCA
JMSF042D09+ CCTTGCAGCCTCAATAAAGTAATGAGCTTTTCAATGGCAGACAACTATATATGTTAATCA
JMSF030M17+ TTCAATGGCAGACANCTATATATGTTAATCA
                      ____________________________________________________________
consensus CCTTGCAGCCTCAATAAAGTAATGAGCTTTTCAATGGCAGACAACTATATATGTTAATCA
 
. : . : . : . : . : . :
JMFF050E05+ CTAAATGATCCTTATAAAAGATTAACACGAATTCAATAATAATAATATAATCTAATAATA
JMSF042D09+ CTAAATGATCCTTATAAAAGATTAACACGAATTCAATAATAATAATATAATCTAATAATA
JMSF030M17+ CTAAATGATCCTTATAAAAGANTAACACGAATTCAATAATAATAATATAATCTAATAATA
                      ____________________________________________________________
consensus CTAAATGATCCTTATAAAAGATTAACACGAATTCAATAATAATAATATAATCTAATAATA
 
. : . : . : . : . : . :
JMFF050E05+ ACAAACTACCTTTTCTTTCCTTTTTCTGCACTTTACCAGAATTATTACAGATATTGGAGC
JMSF042D09+ ACAAACTACCTTTTCTTTCCTTTTTCTGCACTTTACCAGAATTATTACAGATATTGGAGC
JMSF030M17+ ACAAACTACCTTTTCTTTCCTTTTTCTGCACTTTACCAGAATTATTACAGATATTGGAGC
                      ____________________________________________________________
consensus ACAAACTACCTTTTCTTTCCTTTTTCTGCACTTTACCAGAATTATTACAGATATTGGAGC
 
. : . : . : . : . : . :
JMFF050E05+ AAGCATAAAGAACAGATCTTTCTAAGCAGAGCCCTTTATAAATTCATTTAATATGAACAA
JMSF042D09+ AAGCATAAAGAACAGATCTTTCTAAGCAGAGCCCTTTATAAATTCATTTAATATGAACAA
JMSF030M17+ ANGCATAAAGAACAGATCTTTCTAAGCAGAGCCCNTTATAAATTCATTTAATATGAACAA
                      ____________________________________________________________
consensus AAGCATAAAGAACAGATCTTTCTAAGCAGAGCCCTTTATAAATTCATTTAATATGAACAA
 
. : . : . : . : . : . :
JMFF050E05+ TCCAATAAGTACCTTTCTCTCTCTCTCCTCCCTCTCGCAATCCACTCTATCACTGCTTGC
JMSF042D09+ TCCAATAAGTACCTTTCTCTCTCTCTCCTCCCTCTCGCAATCCACTCTATCACTGCTTGC
JMSF030M17+ TCCAATAAGTACCTTTCTCTCTCTCTCCTCCCTCTCGCAATCCACTCTATCACTGCTTGC
                      ____________________________________________________________
consensus TCCAATAAGTACCTTTCTCTCTCTCTCCTCCCTCTCGCAATCCACTCTATCACTGCTTGC
 
. : . : . : . : . : . :
JMFF050E05+ AAAACCAATAATTCGGGAAGATCGCCTGAAATGCTCAAAATCCCGAATCCCCCACTTCCA
JMSF042D09+ AAAACCAATAATTCGGGAAGATCGCCNGAAATGCTCAAAATCCCGAATCCCCCACTTCCA
JMSF030M17+ AAAACCAATAATTCGGGAAGATCGCCTGAAATGCTCAAAATCCCGAATCCCCCACTTCCA
                      ____________________________________________________________
consensus AAAACCAATAATTCGGGAAGATCGCCTGAAATGCTCAAAATCCCGAATCCCCCACTTCCA
 
. : . : . : . : . : . :
JMFF050E05+ TTTCTGCTGAAACAAGCTAAGATTCCCAATCAATACAGGTCTGGAAGAGTGCCATTCCTC
JMSF006A06+ TCAATACAGGTCTGGAAGAGTGCCANTCCTC
JMSF042D09+ TTTCTGCTGAAACAAGCTAAGATTCCCANTCAATACAGGTCTGGAAGAGTGCCATTCCTC
JMSF030M17+ TTTCTGCTGAAACAAGCTAAGATTCCCAATCAATACAGGTCTGGAAGAGTGCCATTCCTC
JMSF011P21+ TCAATACAGGTCTGGAAGAGTGCCANTCCTC
                      ____________________________________________________________
consensus TTTCTGCTGAAACAAGCTAAGATTCCCAATCAATACAGGTCTGGAAGAGTGCCATTCCTC
 
. : . : . : . : . : . :
JMFF050E05+ AAATCAAATCAAAATTAATGCACAGACAAGCTCAGAGTTCCACGATAATTGGTCAAATAT
JMSF006A06+ AAATCAAATCAAAATTAATGCACAGACAAGCTCAGAGTTCCACGATAATTGGTCAAATAT
JMSF042D09+ AAATCAAATCAAAATTAATGCACAGACAAGCTCAGAGTTCCACGATAATTGGTCAAATAT
JMSF030M17+ AAATCAAATCAAAATTAATGCACAGACANGCTCAGAGTTCCACGATAATTGGTCAAATAT
JMSF011P21+ AAATCAAATCAAAATTAATGCACAGACAAGCTCAGAGTTCCACGATAATTGGTCAAATAT
                      ____________________________________________________________
consensus AAATCAAATCAAAATTAATGCACAGACAAGCTCAGAGTTCCACGATAATTGGTCAAATAT
 
. : . : . : . : . : . :
JMFF050E05+ AGAAATATATTAAAAGAAATCGCTAAAAAGAGTAGGAATAGCAATGAACAACGCAGAGTC
JMSF006A06+ AGAAATATATTAAAAGAAATCGCTAAAAAGAGTNGGAATAGCAATGAACAACGCAGAGTC
JMSF042D09+ AGAAATATATTAAAAGAAATCGCTAAAAAGAGTNGGAATAGCAATGAACAACGCAGAGTC
JMSF030M17+ AGAAATATATTAAAAGAAATCGCTAAAAAGAGTNGGAATAGCAATGAACAACGCAGAGTC
JMSF011P21+ AGAAATATATTAAAAGAAATCGCTAAAAAGAGTNGGAATAGCAATGAACAACGCAGAGTC
                      ____________________________________________________________
consensus AGAAATATATTAAAAGAAATCGCTAAAAAGAGTAGGAATAGCAATGAACAACGCAGAGTC
 
. : . : . : . : . : . :
JMFF050E05+ GGAGAGAGATATGAGGAGAGAATTGAGATCGCAAAAAAGCCGCCGATGAGAATTCTTCAA
JMSF006A06+ GGAGAGAGATATGAGGAGAGAATTGAGATCGCAAAAAAGCCGCCGATGAGAATTCTTCAA
JMSF042D09+ GGAGAGAGATATGAGGAGAGAATTGAGATCGCAAAAAAGCCGCCGATGAGAATTCTTCAA
JMSF030M17+ GGAGAGAGATATGAGGAGAGAATTGAGATCGCAAAAAAGCCGCCGATGAGAATTCTTCAA
JMSF011P21+ GGAGAGAGATATGAGGAGAGAATTGAGATCGCAAAAAAGCCGCCGATGAGAATTCTTCAA
                      ____________________________________________________________
consensus GGAGAGAGATATGAGGAGAGAATTGAGATCGCAAAAAAGCCGCCGATGAGAATTCTTCAA
 
. : . : . : . : . : . :
JMFF050E05+ TTTTAGAGAGAGAGAGAGAGAGAGAGAGA
JMSF006A06+ TTTTAGAGAGAGAGAGAGAGAGAGAGAGAGATTATTTATCT
JMSF042D09+ TTTTAGAGAGAGAGAGAGAGAGAGAGAGAGATTATTTATCT
JMSF030M17+ TTTTAGAGAGAGAGAGAGAGAGAGAGAGAGATTATTTATCTGGCTGTCAGGCCGTCT
JMSF011P21+ TTTTAGAGAGAGAGAGAGAGAGAGAGAGAGATTATTTATCTGGCTGTCAGGCCGTCTGCC
                      ____________________________________________________________
consensus TTTTAGAGAGAGAGAGAGAGAGAGAGAGAGATTATTTATCTGGCTGTCAGGCCGTCTGCC