Contig 007786:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF010D04Sequence329007786 (2)ref|XP_009761854.1|1e-32PREDICTED: serine carboxypeptidase-like 18 [Nicotiana sylvestris]725014966ref|XP_004252000.2|7e-72PREDICTED: serine carboxypeptidase-like 7 [Solanum lycopersicum] ref|XP_01031400
JMSF010N12Sequence288007786 (2)gb|KFK32778.1|1e-29hypothetical protein AALP_AA6G287400 [Arabis alpina]644020315ref|XP_010061646.1|3e-36PREDICTED: serine carboxypeptidase-like 2 [Eucalyptus grandis] gb|KCW68630.1| hy

Alignment

This contig is upended


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JMSF010N12+ TCCGAAAA
JMSF010D04+ CGGCCCAACATCGTAAACAATTCCGAAAA
                      ____________________________________________________________
consensus CGGCCCAACATCGTAAACAATTCCGAAAA
 
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JMSF010N12+ AGGAAGAGCAACCTGGGCCGCCAGAGATCCAAAGGAAAAGAGGGTCTTCTTCTGGATTTG
JMSF010D04+ AGGAAGAGCAACCTGGGCCGCCAGAGATCCAAAGGAAAAGAGGGTCTTCTTCTGGATTTG
                      ____________________________________________________________
consensus AGGAAGAGCAACCTGGGCCGCCAGAGATCCAAAGGAAAAGAGGGTCTTCTTCTGGATTTG
 
. : . : . : . : . : . :
JMSF010N12+ ATTCTGACTTGATAAAATAGTAGAAAAGTTGGACCTCTTCCGATTCACCCACGCCTATAT
JMSF010D04+ ATTCTGACTTGATAAAATAGTAGAAAAGTTGGACCTCTTCCGATTCACCCACGCCTATAT
                      ____________________________________________________________
consensus ATTCTGACTTGATAAAATAGTAGAAAAGTTGGACCTCTTCCGATTCACCCACGCCTATAT
 
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JMSF010N12+ ATCCGGTTTCTAGGTGAAATGGGAGTGGTCCTTCAAATCCTGGAAGCGACTTAACTATGG
JMSF010D04+ ATCCGGTTTCTAGGTGAAATGGGAGTGGTCCTTCAAATCCTGGAAGCGACTTAACTATGG
                      ____________________________________________________________
consensus ATCCGGTTTCTAGGTGAAATGGGAGTGGTCCTTCAAATCCTGGAAGCGACTTAACTATGG
 
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JMSF010N12+ AGCCGCATGCATCCAATTCTGGAGAAAGATGCAGAAGAAGAAGAAGAAGAAGAAAAAATG
JMSF010D04+ AGCCGCATGCATCCAATTCTGGAGAAAGATGCAGAAGAAGAAGAAGAAGAAGAAAAAATG
                      ____________________________________________________________
consensus AGCCGCATGCATCCAATTCTGGAGAAAGATGCAGAAGAAGAAGAAGAAGAAGAAAAAATG
 
. : . : . : . : . : . :
JMSF010N12+ TATGGCAATTGCAGAGTGTATATTTCATTGTGGCTTTC
JMSF010D04+ TATGGCAATTGCAGAGTGTATATTTCATTGTGGCTTTCTACTTTTTTAATTATGAAGATC
                      ____________________________________________________________
consensus TATGGCAATTGCAGAGTGTATATTTCATTGTGGCTTTCTACTTTTTTAATTATGAAGATC