clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMSF009K02 | Sequence | 391 | 007782 (4) | gb|EYU41550.1| | 2e-04 | hypothetical protein MIMGU_mgv1a004346mg [Erythranthe guttata] | 716 | 008599 (3) | ref|XP_002283672.1| | 2e-69 | PREDICTED: glucomannan 4-beta-mannosyltransferase 9 [Vitis vinifera] |
JMSF010D02 | Sequence | 351 | 007782 (4) | gb|EYU41550.1| | 1e-04 | hypothetical protein MIMGU_mgv1a004346mg [Erythranthe guttata] | 810 | 008599 (3) | ref|XP_002283672.1| | 5e-70 | PREDICTED: glucomannan 4-beta-mannosyltransferase 9 [Vitis vinifera] |
JMSF018A19 | Sequence | 252 | 007782 (4) | ||||||||
JMSF037N21 | Sequence | 646 | 007782 (4) | gb|EYU41550.1| | 5e-67 | hypothetical protein MIMGU_mgv1a004346mg [Erythranthe guttata] | 665 | 008599 (3) | ref|XP_002283672.1| | 2e-46 | PREDICTED: glucomannan 4-beta-mannosyltransferase 9 [Vitis vinifera] |
This contig is upended
. : . : . : . : . : . :
JMSF037N21+ CTGCTTTATACCCATATCTGTTGTC
____________________________________________________________
consensus CTGCTTTATACCCATATCTGTTGTC
. : . : . : . : . : . :
JMSF037N21+ TCTAATCTCATACTTTATGTTTATTCCACTGCTTGCCCATTTTTGGCACTCCACCTCCAC
____________________________________________________________
consensus TCTAATCTCATACTTTATGTTTATTCCACTGCTTGCCCATTTTTGGCACTCCACCTCCAC
. : . : . : . : . : . :
JMSF037N21+ CATTTCCTTAATAGTGGGATCTGTTGAATCATCAAGAACTTGGACTATGATTCTGTCGGA
____________________________________________________________
consensus CATTTCCTTAATAGTGGGATCTGTTGAATCATCAAGAACTTGGACTATGATTCTGTCGGA
. : . : . : . : . : . :
JMSF037N21+ AGGCCAAGAAAGTCCACATACTGCTCCAATTGAAAGCTTATACACCTCTTTCTCGTTGTA
____________________________________________________________
consensus AGGCCAAGAAAGTCCACATACTGCTCCAATTGAAAGCTTATACACCTCTTTCTCGTTGTA
. : . : . : . : . : . :
JMSF037N21+ CATTGGGATCTGAACCAGAACCATAGGGAAAGCAGCGTTTCCGAGCTCGGCATCCTCCTC
____________________________________________________________
consensus CATTGGGATCTGAACCAGAACCATAGGGAAAGCAGCGTTTCCGAGCTCGGCATCCTCCTC
. : . : . : . : . : . :
JMSF037N21+ TAATGGCTGCCATTTGAACCGTTTCTCCGGCGTCCGGCGGAACACCTTGACGACGGTCAT
JMSF010D02+ CGTCCGGCGGAACACCTTGACGACGGTCAT
JMSF009K02+ CGTCCGGCGGAACACCTTGACGACGGTCAT
____________________________________________________________
consensus TAATGGCTGCCATTTGAACCGTTTCTCCGGCGTCCGGCGGAACACCTTGACGACGGTCAT
. : . : . : . : . : . :
JMSF037N21+ CACGACGCCCATATACACCCACTCGACGAACAACAGAGTCGTCATCACGAAGCAGATGAG
JMSF010D02+ CACGACGCCCATATACACCCACTCGACGAACAACAGAGTCGTCATCACGAAGCAGATGAG
JMSF009K02+ CACGACGCCCATATACACCCACTCGACGAACAACAGAGTCGTCATCACGAAGCAGATGAG
____________________________________________________________
consensus CACGACGCCCATATACACCCACTCGACGAACAACAGAGTCGTCATCACGAAGCAGATGAG
. : . : . : . : . : . :
JMSF037N21+ CACAGCAATGTTGAGGATTGGAGCTATCAATGGCAGTTTAAAGGCCTTAATCTCACCCCA
JMSF010D02+ CACAGCAATGTTGAGGATTGGAGCTATCAATGGCAGTTTAAAGGCCTTAATCTCACCCCA
JMSF018A19+ AATCTCACCCCA
JMSF009K02+ CACAGCAATGTTGAGGATTGGAGCTATCAATGGCAGTTTAAAGGCCTTAATCTCACCCCA
____________________________________________________________
consensus CACAGCAATGTTGAGGATTGGAGCTATCAATGGCAGTTTAAAGGCCTTAATCTCACCCCA
. : . : . : . : . : . :
JMSF037N21+ TATCAGCAACAACTGCTCCCACACGAAATCGCCGGCATCGGAAATCGCGCCGGAGAGATT
JMSF010D02+ TATCAGCAACAACTGCTCCCACACGAAATCGCCGGCATCGGAAATCGCGCCGGAGAGATT
JMSF018A19+ TATCAGCAACAACTGCTCCCACACGAAATCGCCGGCATCGGAAATCGCGCCGGAGAGATT
JMSF009K02+ TATCAGCAACAACTGCTCCCACACGAAATCGCCGGCATCGGAAATCGCGCCGGAGAGATT
____________________________________________________________
consensus TATCAGCAACAACTGCTCCCACACGAAATCGCCGGCATCGGAAATCGCGCCGGAGAGATT
. : . : . : . : . : . :
JMSF037N21+ CATCGCCGGCGAGAGGATTCGCAGTTAGTTTGCTCTAATCGGACGGCGCATTCAGTGCTG
JMSF010D02+ CATCGCCGGCGAGAGGATTCGCAGTTAGTTTGCTCTAATCGGACGGCGCATTCAGTGCTG
JMSF018A19+ CATCGCCGGCGAGAGGATTCGCAGTTAGTTTGCTCTAATCGGACGGCGCATTCAGTGCTG
JMSF009K02+ CATCGCCGGCGAGAGGATTCGCAGTTAGTTTGCTCTAATCGGACGGCGCATTCAGTGCTG
____________________________________________________________
consensus CATCGCCGGCGAGAGGATTCGCAGTTAGTTTGCTCTAATCGGACGGCGCATTCAGTGCTG
. : . : . : . : . : . :
JMSF037N21+ AAGGGACTATAGCAGCGAGGTTTAACAGTGTAGAGTGAGGTATAAGGAAGAGAGAGAGAG
JMSF010D02+ AAGGGACTATAGCAGCGAGGTTTAACAGTGTAGAGTGAGGTATAAGGAAGAGAGAGAGAG
JMSF018A19+ AAGGGACTATAGCAGCGAGGTTTAACAGTGTAGAGTGAGGTATAAGGAAGAGAGAGAGAG
JMSF009K02+ AAGGGACTATAGCAGCGAGGTTTAACAGTGTAGAGTGAGGTATAAGGAAGAGAGAGAGAG
____________________________________________________________
consensus AAGGGACTATAGCAGCGAGGTTTAACAGTGTAGAGTGAGGTATAAGGAAGAGAGAGAGAG
. : . : . : . : . : . :
JMSF037N21+ GGGGGCAAGGAAGGAATGAT
JMSF010D02+ GGGGGCAAGGAAGGAATGAT
JMSF018A19+ GGGGGCAAGGAAGGAATGATGGAGGAAATAGACAGAGAGAGAAGACTAGAGGAGTCAATC
JMSF009K02+ GGGGGCAAGGAAGGAATGATGGAGGAAATAGACAGAGAGAGAAGACTAGAGGAGTCAATC
____________________________________________________________
consensus GGGGGCAAGGAAGGAATGATGGAGGAAATAGACAGAGAGAGAAGACTAGAGGAGTCAATC