Contig 007779:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN009E17Sequence629007779 (5)ref|XP_002264435.1|1e-109PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP16-4, chloroplastic isoform
JMFN034A21Sequence449007779 (5)ref|XP_009623509.1|9e-60PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP16-4, chloroplastic [Nicotia
JMFN038A06Sequence622007779 (5)ref|XP_009623509.1|1e-88PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP16-4, chloroplastic [Nicotia
JMSF008P23Sequence351007779 (5)ref|XP_009623509.1|1e-27PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP16-4, chloroplastic [Nicotia710007779 (5)ref|XP_002264435.1|1e-75PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP16-4, chloroplastic isoform

Alignment

This contig is upended


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JMFN009E17+                                                 GATGTTTGGAGACTAAATCATA
rJMSF008P23-           GTGGGTTTCTATACTAAACCAACCAGACAGACAGAAAGATGTTTGGAGACTAAATCATA
                      ____________________________________________________________
consensus              GTGGGTTTCTATACTAAACCAACCAGACAGACAGAAAGATGTTTGGAGACTAAATCATA
 
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JMFN009E17+           GTGCAGTTATCCTTCAATGACTTTAACAGCAGTCCCAAATGGGCTCTGTTTGATTGACAG
rJMSF008P23-          GTGCAGTTATCCTTCAATGACTTTAACAGCAGTCCCAAATGGGCTCTGTTTGATTGACAG
                      ____________________________________________________________
consensus             GTGCAGTTATCCTTCAATGACTTTAACAGCAGTCCCAAATGGGCTCTGTTTGATTGACAG
 
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JMFN009E17+           CAGTTCCACATCCAACTCGATAGTTGCATTTGGAGGGATTTCCTGAACCCCTTTGTTTCC
rJMSF008P23-          CAGTTCCACATCCAACTCGATAGTTGCATTTGGAGGGATTTCCTGAACCCCTTTGTTTCC
JMFN038A06+                    ATCCAACTCGATAGTTGCATTTGGAGGGATTTCCTGAACCCCTTTGTTTCC
                      ____________________________________________________________
consensus             CAGTTCCACATCCAACTCGATAGTTGCATTTGGAGGGATTTCCTGAACCCCTTTGTTTCC
 
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JMFN009E17+           GTAAGCTAGATTAGGAGGGACTATCAGTAAGCGCTGTCCTCCCACTCTCATGCCTTGAAC
rJMSF008P23-          GTAAGCTAGATTAGGAGGGACTATCAGTAAGCGCTGTCCTCCCACTCTCATG----GAAC
JMFN038A06+           GTAAGCTAGATTAGGAGGGACTATCAGTAAGCGCTGTCCTCCCACTCTCATGCCTTGAAC
                      ____________________________________________________________
consensus             GTAAGCTAGATTAGGAGGGACTATCAGTAAGCGCTGTCCTCCCACTCTCATGCCTTGAAC
 
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JMFN009E17+           ACCAAGGTCTAATCCTTTAAGGACTGTCCCTCGCTCTGATTGGCCCACATCAAATCCGTA
rJMSF008P23-          ACCAAGGTCTAATCCTTTAAGGACTGTCCCTCGCTCTGATTGGCCCACATCAAATCCGTA
JMFN034A21+                                                            TCAAATCCGTA
JMFN038A06+           ACCAAGGTCTAATCCTTTAAGGACTGTCCCTCGCTCTGATTGGCCCACATCAACTCCGTA
                      ____________________________________________________________
consensus             ACCAAGGTCTAATCCTTTAAGGACTGTCCCTCGCTCTGATTGGCCCACATCAAATCCGTA
 
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JMFN009E17+           AGGCGTTCCACCTCCAACGCCCATTCCTTGTCTGCTTGTCATAAACGTAATGCCTCTCCA
rJMSF008P23-          AGGCGTTCCACCTCCAACGCCCATTCCTTGTCTGCTTGTCATAAACGTAATGCCTCTCCA
JMFN034A21+           AGGCGTTCCACCTCCAACGCCCATTCCTTGTGTGCTTGTCATAAACGTAATGCCTCTCCA
JMFN038A06+           AGGCGTTCCACCTCCAACGCCCATTCCTTGTCTGCTTGTCATAAACGTAATGCCTCTCCA
                      ____________________________________________________________
consensus             AGGCGTTCCACCTCCAACGCCCATTCCTTGTCTGCTTGTCATAAACGTAATGCCTCTCCA
 
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JMFN009E17+           TTTAGCAACATAGTGGAC-----TGCAACTCTAGATCCCTTCACAGCTTCAGCTCCATTC
rJMSF008P23-          TTTAGCAACATAGTGGACCGTACTGCAACTCTAGATCCCTTCACAGCTTCAGCTCCATTC
JMFN034A21+           TTTAGCAACATAGTGGAC-----TGCAACTCTAGATCCCTTCACAGTTTCAGCTCCATTC
JMFN038A06+           TTTAGCAACATAGTGGAC-----TGCAACTCTAGATCCCTTCACAGCTTCAGCTCCATTC
                      ____________________________________________________________
consensus             TTTAGCAACATAGTGGAC-----TGCAACTCTAGATCCCTTCACAGCTTCAGCTCCATTC
 
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JMFN009E17+           CCAATCTTTAGATCATAGTACTTTAGACCATTAGGAAGAGTTGTATAATCACTCTCAGGT
rJMSF008P23-          CCAATCTTTAGATCATAGTACTTTAGACCATTAGGAAGAGTTGTATAATCACTCTCAGGT
JMFN034A21+           CCAATCTTTAGATCATAGTACTTTAGACCATTAGGAAGAGTCGTATAATCACTCTCAGGT
JMFN038A06+           CCAATCTTTAGATCATAGTACTTTAGACCATTAGGAAGAGTTGTATAATCACTCTCAGGT
JMSF008P23+                    AGATCATAGTACTTTAGACCANTAGGAAGAGTTGTATAATCACTCTCAGGT
                      ____________________________________________________________
consensus             CCAATCTTTAGATCATAGTACTTTAGACCATTAGGAAGAGTTGTATAATCACTCTCAGGT
 
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JMFN009E17+           ATTTTTGCACCTCGAAGAGCTCTTCTACTTGTGCTAACAGCGCTGGCCACATCACAGAGA
rJMSF008P23-          ATTTTTGCACCTCGAAGAGCTCTTCTACTTGTGCTAACAGCGCTGGCCACATCACAGAGA
JMFN034A21+           ATTTTTGCACCTCGAAGAGCTGTTCTACTTGTGCTAACAGCGCTGGCCACATCACAGAGA
JMFN038A06+           ATTTTTGCACCTCGAAGAGCTCTTCTACTTGTGCTAACAGCGCTGGCCACATCACAGAGA
JMSF008P23+           ATTTTTGCACCTCGAAGAGCTCTTCTACTTGTGCTAACAGCGCTGGCCACATCACAGAGA
                      ____________________________________________________________
consensus             ATTTTTGCACCTCGAAGAGCTCTTCTACTTGTGCTAACAGCGCTGGCCACATCACAGAGA
 
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JMFN009E17+           TAAATGCTAGCAGCAGTTGACAAAACGCAGCCCATTAAGGCCCTTCTTCCCTCATTCTGC
rJMSF008P23-          TAAATGCTAGCAGCAGTTGACAAAACGCAGCCCATTAAGGCCCTTCTTCCCTCATTCTGC
JMFN034A21+           TAAATGCTAGCAGCAGCTGACAAAACGCAGCCCATTAAGGCCCTTCTTCCCTCATTCTGC
JMFN038A06+           TAAATGCTAGCAGCAGTTGACAAAACGCAGCCCATTAAGGCCCTTCTTCCCTCATTCTGC
JMSF008P23+           TAAATGCTAGCAGCAGTTGACAAAACGCAGCCCATTAAGGCCCTTCTTCCCTCATTCTGC
                      ____________________________________________________________
consensus             TAAATGCTAGCAGCAGTTGACAAAACGCAGCCCATTAAGGCCCTTCTTCCCTCATTCTGC
 
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JMFN009E17+           AAAGACAAGGTTTTGATTGTGGGCTCGGGAGATGATGATGAGCAGCGACAAAGTAATATT
rJMSF008P23-          AAAGACAAGGTTTTGATTGTGGGCTCGGGAGATGATGATGAGCAGCGACAAAGTAATATT
JMFN034A21+           AAAGACAAGGTTTTGATTGTGGGCTCGGGAGATGATGATGAGCAGCGACAAAGTAATATT
JMFN038A06+           AAAGACAAGGTTTTGATTGTGGGCTCGGGAGATGATGATGAGCAGCGACAAAGTAATATT
JMSF008P23+           AAAGACAAGGTTTTGATTGTGGGCTCGGGAGATGATGATGAGCAGCGACAAAGTAATATT
                      ____________________________________________________________
consensus             AAAGACAAGGTTTTGATTGTGGGCTCGGGAGATGATGATGAGCAGCGACAAAGTAATATT
 
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JMFN009E17+           CTTGACTTCCAC                                                
rJMSF008P23-          CTTGACTTCCACTTTCTGGTGGGAGAAATTGAGGGGAAAGATTGGGTAAACATGG     
JMFN034A21+           CTTGACTTCCACTTTTTGGTGGGAGAAATTGAGGGGAAAGATTGGGTAAACATGGCGGAC
JMFN038A06+           CTTGACTTCCACTTTCTGGTGGGAGAAATTGAGGGGAAAGATTGGGTAAACATGGCGGAC
JMSF008P23+           CTTGACTTCCACTTTCTGGTGGGAGAAATTGAGGGGAAAGATTGGGTAAACATGGCGGAC
                      ____________________________________________________________
consensus             CTTGACTTCCACTTTCTGGTGGGAGAAATTGAGGGGAAAGATTGGGTAAACATGGCGGAC
 
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JMFN034A21+           TTGAGAGGATGGTAGAGGAGGAG                                     
JMFN038A06+           TTGAGAGGATGGTAGAGGAGGAGATCCATAGTCCGA                        
JMSF008P23+           TTGAGAGGATGGTAGAGGAGGAGATCCATAGTCCGACACATGCAGTTAGAGTGACAGTTC
                      ____________________________________________________________
consensus             TTGAGAGGATGGTAGAGGAGGAGATCCATAGTCCGACACATGCAGTTAGAGTGACAGTTC