| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF006D16 | Sequence | 267 | 007759 (3) | 338 | 011430 (4) | gb|KDP36677.1| | 8e-13 | hypothetical protein JCGZ_07895 [Jatropha curcas] | |||
| JMSF014F04 | Sequence | 249 | 007759 (3) | ref|XP_009793401.1| | 7e-07 | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g34110 | 764 | 011430 (4) | ref|XP_011084190.1| | 5e-67 | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 |
| JMSF049C18 | Sequence | 685 | 007759 (3) | ref|XP_011084190.1| | 4e-32 | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 | 749 | 011430 (4) | ref|XP_011084190.1| | 2e-64 | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 |
This contig is upended
. : . : . : . : . : . :
JMSF014F04+ TTTGCCAATTGCTCATGAATGACAAAAACTTCAAAGAGGT
JMSF049C18+ TTCANGGAGCCACTTATTTGCCAATTGCTCATGAATGACAAAAACTTCAAAGAGGT
____________________________________________________________
consensus TTCANGGAGCCACTTATTTGCCAATTGCTCATGAATGACAAAAACTTCAAAGAGGT
. : . : . : . : . : . :
JMSF014F04+ TAAGGATCCAAGGGATTGTGGAATTTTTCCGCTCAGATCATTATAAGCAAAATTGAGCAG
JMSF049C18+ TAAGGATCCAAGGGATTGTGGAATTTTTCCGCTCAGATCATTATAAGCAAAATTGAGCAG
____________________________________________________________
consensus TAAGGATCCAAGGGATTGTGGAATTTTTCCGCTCAGATCATTATAAGCAAAATTGAGCAG
. : . : . : . : . : . :
JMSF014F04+ CTCCAGATGTTTCAGGGTTGTTAGCTCTACAAA
JMSF049C18+ CTCCAGATGTTTCAGGGTTGTTAGCTCTTCAAAGTGAGACCAAGTATTGATCGAGTTGCC
____________________________________________________________
consensus CTCCAGATGTTTCAGGGTTGTTAGCTCTTCAAAGTGAGACCAAGTATTGATCGAGTTGCC
. : . : . : . : . : . :
JMSF049C18+ TTCCATATTAAGGATGCTAAGTGAGCGCAGTAAACCTAAACTTGGAATTTCATCGTACAA
____________________________________________________________
consensus TTCCATATTAAGGATGCTAAGTGAGCGCAGTAAACCTAAACTTGGAATTTCATCGTACAA
. : . : . : . : . : . :
JMSF049C18+ ATTGAAACTTAAATCCAAAACCTGCAACTTGCTTAAGTTTAGTACCTCGTGGAATCCTCG
____________________________________________________________
consensus ATTGAAACTTAAATCCAAAACCTGCAACTTGCTTAAGTTTAGTACCTCGTGGAATCCTCG
. : . : . : . : . : . :
JMSF049C18+ TATGTTGTTTGAACCTAAGCTCAGATTCTGTAGTTCTCGGAATGGAAGAAACAGTAATGA
____________________________________________________________
consensus TATGTTGTTTGAACCTAAGCTCAGATTCTGTAGTTCTCGGAATGGAAGAAACAGTAATGA
. : . : . : . : . : . :
JMSF049C18+ AGTATTTAGGAAAATAGGATTATCAGTATTCAGCCTAATATCGGCAAGGGAGAGTTGGGT
____________________________________________________________
consensus AGTATTTAGGAAAATAGGATTATCAGTATTCAGCCTAATATCGGCAAGGGAGAGTTGGGT
. : . : . : . : . : . :
JMSF049C18+ GACATGGTGATTGGATAGGTCACACTTAACCCTTTCCCACATGCAGCAATCCGTTTCTTT
____________________________________________________________
consensus GACATGGTGATTGGATAGGTCACACTTAACCCTTTCCCACATGCAGCAATCCGTTTCTTT
. : . : . : . : . : . :
JMSF049C18+ TCCATCACCCCAAGAAGAAAGGGCAGTGGTTCCATTAAAGGCATCTCTTAGTCTCAAAAG
JMSF006D16+ CATCTCTTAGTCTCAAAAG
____________________________________________________________
consensus TCCATCACCCCAAGAAGAAAGGGCAGTGGTTCCATTAAAGGCATCTCTTAGTCTCAAAAG
. : . : . : . : . : . :
JMSF049C18+ TGCTCTTCTTTCTTCTTCATCACACCCAACACTTCCATCACC
JMSF006D16+ TGCTCTTCTTTCTTCTACCTCACACCCAACACTTCCATCACCCTGCACCTGAAGTACCAC
____________________________________________________________
consensus TGCTCTTCTTTCTTCTTCCTCACACCCAACACTTCCATCACCCTGCACCTGAAGTACCAC
. : . : . : . : . : . :
JMSF006D16+ AAAGCTTAACATTAACCATAAACAAAACAAACAAGGATTCGCCATACAAATTAATTAAAG
____________________________________________________________
consensus AAAGCTTAACATTAACCATAAACAAAACAAACAAGGATTCGCCATACAAATTAATTAAAG
. : . : . : . : . : . :
JMSF006D16+ AAATAATAATGAGAACTATTATTAGAAGATAATGGAATATTATATTTTATCTTAGTGGCC
____________________________________________________________
consensus AAATAATAATGAGAACTATTATTAGAAGATAATGGAATATTATATTTTATCTTAGTGGCC