Contig 007746:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002N23Sequence501007746 (5)ref|XP_006471911.1|3e-19PREDICTED: putative phytosulfokines 6-like isoform X1 [Citrus sinensis]528007746 (5)ref|XP_006471911.1|4e-19PREDICTED: putative phytosulfokines 6-like isoform X1 [Citrus sinensis]
JMFN034B02Sequence628007746 (5)ref|XP_006471911.1|8e-19PREDICTED: putative phytosulfokines 6-like isoform X1 [Citrus sinensis]
JMSF004L14Sequence402007746 (5)ref|XP_006471911.1|3e-18PREDICTED: putative phytosulfokines 6-like isoform X1 [Citrus sinensis]277001082 (7)
JMSF048M12Sequence674007746 (5)ref|XP_006471911.1|1e-18PREDICTED: putative phytosulfokines 6-like isoform X1 [Citrus sinensis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF048M12+ AACTGCATATCTAG
                      ____________________________________________________________
consensus AACTGCATATCTAG
 
. : . : . : . : . : . :
JMFN034B02+ CTAGTATTTAATACTATTTCTAGAAATATAAGCAGAAAACACCA
JMSF048M12+ AGCCTNGCACCTATAGCTAGTATTTAATACTATTTCTAGAAATATAAGCAGAAAACACCA
                      ____________________________________________________________
consensus AGCCTNGCACCTATAGCTAGTATTTAATACTATTTCTAGAAATATAAGCAGAAAACACCA
 
. : . : . : . : . : . :
JMFN034B02+ CACCACCAAACACATAATCACTCTGGCTGCAGCTGGCTCTTTCCTGAAGAAACATCAAGG
JMSF048M12+ CACCACCAAACACATAATCACTCTGGCTGCAGCTGGCTCTTTCCTGAAGAAACATCAAGG
                      ____________________________________________________________
consensus CACCACCAAACACATAATCACTCTGGCTGCAGCTGGCTCTTTCCTGAAGAAACATCAAGG
 
. : . : . : . : . : . :
JMFN034B02+ ATTGCTGACACATTTTACAATGTTAAACAACCATTTCACAATATATATAATTAATCTGAA
JMFF002N23+ CAATATATATAATTAATCTGAA
rJMFF002N23- ATTTTACAATGTTAAACAACCATTTCACAATATATATAATTAATCTGAA
JMSF048M12+ ATTGCTGACACATTTTACAATGTTAAACAACCATTTCACAATATATATAATTAATCTGAA
                      ____________________________________________________________
consensus ATTGCTGACACATTTTACAATGTTAAACAACCATTTCACAATATATATAATTAATCTGAA
 
. : . : . : . : . : . :
JMFN034B02+ GCTTCTTATGAAAATTGTCTGCTACATATTTAGTCTTTTTTCCAGACAATAATGTTTGGT
JMFF002N23+ GCTTCTTATGAAAATTGTCTGCTACATATTTAGTCTTTTTTCCAGACAATAATGTTTGGT
rJMFF002N23- GCTTCTTATGAAAATTGTCTGCTACATATTTAGTCTTTTTTCCAGACAATAATGTTTGGT
JMSF048M12+ GCTTCTTATGAAAATTGTCTGCTACATATTTAGTCTTTTTTCCAGACAATAATGTTTGGT
                      ____________________________________________________________
consensus GCTTCTTATGAAAATTGTCTGCTACATATTTAGTCTTTTTTCCAGACAATAATGTTTGGT
 
. : . : . : . : . : . :
JMFN034B02+ TGGGGAAACATCATCTAGGGGTTGTGTTGCTGAGTGTAGATGTAATCCAGATGAGCCTCT
JMFF002N23+ TGGGGAAACATCATCTAGGGGTTGTGTTGCTGAGTGTAGATGTAATCCAGATGAGCCTCT
rJMFF002N23- TGGGGAAACATCATCTAGGGGTTGTGTTGCTGAGTGTAGATGTAATCCAGATGAGCCTCT
JMSF048M12+ TGGGGAAACATCATCTAGGGGTTGTGTTGCTGAGTGTAGATGTAATCCAGATGAGCCTCT
JMSF004L14+ GGGTTGTGTTGCTGAGTGTAGATGTAATCCAGATGAGCCTCT
                      ____________________________________________________________
consensus TGGGGAAACATCATCTAGGGGTTGTGTTGCTGAGTGTAGATGTAATCCAGATGAGCCTCT
 
. : . : . : . : . : . :
JMFN034B02+ GCAACCACCCTTCTCTTCATGCATTCTTCATCTGTGGTCTCACATTTCTCTAGCCCCATA
JMFF002N23+ GCAACCACCCTTCTCTTCATGCATTCTTCATCTGTGGTCTCACATTTCTCTAGCCCCATA
rJMFF002N23- GCAACCACCCTTCTCTTCATGCATTCTTCATCTGTGGTCTCACATTTCTCTAGCCCCATA
JMSF048M12+ GCAACCACCCTTCTCTTCATGCATTCTTCATCTGTGGTCTCACATTTCTCTAGCCCCATA
JMSF004L14+ GCAACCACCCTTCTCTTCATGCATTCTTCATCTGTGGTCTCACATTTCTCTAGCCCCATA
                      ____________________________________________________________
consensus GCAACCACCCTTCTCTTCATGCATTCTTCATCTGTGGTCTCACATTTCTCTAGCCCCATA
 
. : . : . : . : . : . :
JMFN034B02+ AGCTTCTCTAGAGAATCAGTGGTTTCTGGCTTCATTAGTTCACTGTTGGTGCCATTTTCA
JMFF002N23+ AGCTTCTCTAGAGAATCAGTGGTTTCTGGCTTCATTAGTTCACTGTTGGTGCCATTTTCA
rJMFF002N23- AGCTTCTCTAGAGAATCAGTGGTTTCTGGCTTCATTAGTTCACTGTTGGTGCCATTTTCA
JMSF048M12+ AGCTTCTCTAGAGAATCAGTGGTTTCTGGCTTCATTAGTTCACTGTTGGTGCCATTTTCA
JMSF004L14+ AGCTTCTCTAGAGAATCAGTGGTTTCTGGCTTCATTAGTTCACTGTTGGTGCCATTTTCA
                      ____________________________________________________________
consensus AGCTTCTCTAGAGAATCAGTGGTTTCTGGCTTCATTAGTTCACTGTTGGTGCCATTTTCA
 
. : . : . : . : . : . :
JMFN034B02+ AGCTTCACTTCCTCTTCTTTCCCTTGTTTGTTTGCCAAGGACCGGCCTGCAGAAAACTGT
JMFF002N23+ AGCTTCACTTCCTCTTCTTTCCCTTGTTTGTTTGCCAAGGACCGGCCTGCAGAAAACTGT
rJMFF002N23- AGCTTCACTTCCTCTTCTTTCCCTTGTTTGTTTGCCAAGGACCGGCCTGCAGAAAACTGT
JMSF048M12+ AGCTTCACTTCCTCTTCTTTCCCTTGTTTGTTTGCCAAGGACCGGCCTGCAGAAAACTGT
JMSF004L14+ AGCTTCACTTCCTCTTCTTTCCCTTGTTTGTTTGCCAAGGACCGGCCTGCAGAAAACTGT
                      ____________________________________________________________
consensus AGCTTCACTTCCTCTTCTTTCCCTTGTTTGTTTGCCAAGGACCGGCCTGCAGAAAACTGT
 
. : . : . : . : . : . :
JMFN034B02+ GAGGAAGTGATGAGGAAAACAAAGAGAAGAAGTGCAAAGGAAACAGTCTTTTGCTTCANG
JMFF002N23+ GAGGAAGTGATGAGGAAAACAAAGAGAAGAAGTGCAAAGGAAACAGTCTTTTGCTTCATG
rJMFF002N23- GAGGAAGTGATGAGGAAAACAAAGAGAAGAAGTGCAAAGGAAACAGTCTTTTGCTTCATG
JMSF048M12+ GAGGAAGTGATGAGGAAAACAAAGAGAAGAAGTGCAAAGGAAACAGTCTTTTGCTTCATG
JMSF004L14+ GAGGAAGTGATGAGGAAAACAAAGAGAAGAAGTGCAAAGGAAACAGTCTTTTGCTTCATG
                      ____________________________________________________________
consensus GAGGAAGTGATGAGGAAAACAAAGAGAAGAAGTGCAAAGGAAACAGTCTTTTGCTTCATG
 
. : . : . : . : . : . :
JMFN034B02+ GNNTTCAGTTCTTCAGACTTCAGACAGTAAAACTCAGATTTCTTGACTGGCTGTGTTCTT
JMFF002N23+ GTTTTCAGTTCTTCAGACTTCAGACAGTAAAACTCAGATTTCTTGACTGGCTGTGTTCTT
rJMFF002N23- GTTTTCAGTTCTTCAGACTTCAGACAGTAAAACTCAGATTTCTTGACTGGCTGTGTTCTT
JMSF048M12+ GTTTTCAGTTCTTCAGACTTCAGACAGTAAAACTCAGATTTCTTGACTGGCTGTGTTCTT
JMSF004L14+ GTTTTCAGTTCTTCAGACTTCAGACAGTAAAACTCAGATTTCTTGACTGGCTGTGTTCTT
                      ____________________________________________________________
consensus GTTTTCAGTTCTTCAGACTTCAGACAGTAAAACTCAGATTTCTTGACTGGCTGTGTTCTT
 
. : . : . : . : . : . :
JMFN034B02+ GTGAGGGAGAGAGAGAGAGAGAGAGATAGTTGTTATAGGACTTG
JMFF002N23+ GTGAGGGAGAGAGAGAGAGAGAGAGATAGTTGTTATAGGACTTGGGAGTTGAGGTTT
rJMFF002N23- GTGAGGGAGAGAGAGAGAGAGAGAGATAGTTGTTATAGGACTTGGGAGTTGAGGTTT
JMSF048M12+ GTGAGGGAGAGAGAGAGAGAGAGAGATAGTTGTTATAGGACTTGGGAGTTGAGGTTT
JMSF004L14+ GTGAGGGAGAGAGAGAGAGAGAGAGATAGTTGTTATAGGACTTGGGAGTTGAGGTTTGTC
                      ____________________________________________________________
consensus GTGAGGGAGAGAGAGAGAGAGAGAGATAGTTGTTATAGGACTTGGGAGTTGAGGTTTGTC