Contig 007743:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF016P20Sequence545007743 (3)ref|XP_011078150.1|2e-96PREDICTED: eukaryotic translation initiation factor 3 subunit K-like [Sesamum i
JMFS116E06Sequence587007743 (3)ref|XP_011093891.1|1e-108PREDICTED: eukaryotic translation initiation factor 3 subunit K [Sesamum indicu
JMSF004E16Sequence279007743 (3)ref|XP_011039915.1|6e-27PREDICTED: eukaryotic translation initiation factor 3 subunit K-like [Populus e189003955 (67)gb|ABR26184.1|4e-26serine-glyoxylate aminotransferase [Oryza sativa Indica Group]

Alignment

This contig is upended


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JMFS116E06+                                                                   AAGA
                      ____________________________________________________________
consensus                                                                     AAGA
 
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JMFS116E06+           CCTTCAATGTTAATGGCCTCGGCAAGAACAGACCGAGGGACCTTTTGGTAGGTCAGTGAA
JMFF016P20+                                                          GTAGGTCAGTGAA
                      ____________________________________________________________
consensus             CCTTCAATGTTAATGGCCTCGGCAAGAACAGACCGAGGGACCTTTTGGTAGGTCAGTGAA
 
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JMFS116E06+           AGAACATGAATCGCATACATTTGAATTGCATGTTCAAAACCTGGCACAACTTCTACTATA
JMFF016P20+           AGAACATGAATCGCATACATTTGAATTGCATGTTCAAAACCTGGCACAACTTCTACTATA
                      ____________________________________________________________
consensus             AGAACATGAATCGCATACATTTGAATTGCATGTTCAAAACCTGGCACAACTTCTACTATA
 
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JMFS116E06+           TGACGACTCTTAGCTGCCTCATCCCAAAATTGGCGGAATCTTGCTGTCTCCAAGTAGTGT
JMFF016P20+           TGACGACTCTTAGCTGCCTCATCCCAAAATTGGCGGAATCTTGCTGTCTCCAAGTAGTGT
                      ____________________________________________________________
consensus             TGACGACTCTTAGCTGCCTCATCCCAAAATTGGCGGAATCTTGCTGTCTCCAAGTAGTGT
 
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JMFS116E06+           GAGAGAACAATTAGAGTCTTGAACTGTTCTTCCATTTGCACTCGTTCTGGGATTAAGAAA
JMFF016P20+           GAGAGAACAATTAGAGTCTTGAACTGTTCTTCCATTTGCACTCGTTCTGGGATTAAGAAA
                      ____________________________________________________________
consensus             GAGAGAACAATTAGAGTCTTGAACTGTTCTTCCATTTGCACTCGTTCTGGGATTAAGAAA
 
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JMFS116E06+           AGACAAAGGCTGAAATCTGGCGCTGGCATGGCCATCAGAGCCTTGACCAAAATGCGAGCA
JMFF016P20+           AGACAAAGGCTGAAATCTGGCGCTGGCATGGCCATCAGAGCCTTGACCAAAATGCGAGCA
                      ____________________________________________________________
consensus             AGACAAAGGCTGAAATCTGGCGCTGGCATGGCCATCAGAGCCTTGACCAAAATGCGAGCA
 
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JMFS116E06+           ACAATTTGTGTACTCATCCTCTCAGGCTCAAACTGATAAAGACGCAAAAGGCAAAGATTT
JMFF016P20+           ACAATTTGTGTACTCATCCTCTCAGGCTCAAACTGATAAAGACGCAAAAGGCAAAGATTT
JMSF004E16+                                TCAGGCTCAAACTGATAAAGACGCAAAAGGCAAAGATTT
                      ____________________________________________________________
consensus             ACAATTTGTGTACTCATCCTCTCAGGCTCAAACTGATAAAGACGCAAAAGGCAAAGATTT
 
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JMFS116E06+           GCATCCAAATTGTAAGTCTGCGAAGAAACCTGTTCATTGACGTAGTTCTCGAGATCAGGG
JMFF016P20+           GCATCCAAATTGTAAGTCTGCGAAGAAACCTGTTCATTGACGTAGTTCTCGAGATCAGGG
JMSF004E16+           GCATCCAAATTGTAAGTCTGCGAAGAAACCTGTTCATTGACGTAGTTCTCGAGATCAGGG
                      ____________________________________________________________
consensus             GCATCCAAATTGTAAGTCTGCGAAGAAACCTGTTCATTGACGTAGTTCTCGAGATCAGGG
 
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JMFS116E06+           AGGATGTCTGGATTGTAAGGATTGACGACGATGAGTTGCTCCACCGTGTACGACAGCGCC
JMFF016P20+           AGGATGTCTGGATTGTAAGGATTGACGACGATGAGTTGCTCCACCGTGTACGACAGCGCC
JMSF004E16+           AGGATGTCTGGATTGTAAGGATTGACGACGATGAGTTGCTCCACCGTGTACGACAGCGCC
                      ____________________________________________________________
consensus             AGGATGTCTGGATTGTAAGGATTGACGACGATGAGTTGCTCCACCGTGTACGACAGCGCC
 
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JMFS116E06+           GACGGCTGATTTTGTCCAGCCACCTCTCTCCCCATTTTCTGAAGCTTATTCAAACACGCA
JMFF016P20+           GACGGCTGATTTTGTCCAGCCACCTCTCTCCCCATTTTCTGAAGCTTATTCAAACACGCA
JMSF004E16+           GACGGCTGATTTTGTCCAGCCACCTCTCTCCCCATTTTCTGAAGCTTATTCAAACACGCA
                      ____________________________________________________________
consensus             GACGGCTGATTTTGTCCAGCCACCTCTCTCCCCATTTTCTGAAGCTTATTCAAACACGCA
 
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JMFS116E06+           ACGCCCGCCGGTGAGATTTTTCGAGCTCAAGTTTACAGCTGCA                 
JMFF016P20+           ACGCCCGCCGGTGAGATTTTTCGAGCTCAAGTTTACAGCTGCAGAGGTTTCT        
JMSF004E16+           ACGCCCGCCGGTGAGATTTTTCGAGCTCAAGTTTACAGCTGCAGAGGTTTCTAGGGCTTC
                      ____________________________________________________________
consensus             ACGCCCGCCGGTGAGATTTTTCGAGCTCAAGTTTACAGCTGCAGAGGTTTCTAGGGCTTC