clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF011N12 | Sequence | 581 | 007736 (7) | ref|XP_006345366.1| | 3e-27 | PREDICTED: cell division control protein 48 homolog C-like [Solanum tuberosum] | 785 | 012793 (4) | ref|XP_007020346.1| | 1e-56 | Cell division control protein 48 C isoform 2 [Theobroma cacao] gb|EOY11871.1| Ce |
JMFS053A03 | Sequence | 570 | 007736 (7) | ref|XP_006345366.1| | 1e-15 | PREDICTED: cell division control protein 48 homolog C-like [Solanum tuberosum] | |||||
JMFS158E12 | Sequence | 356 | 007736 (7) | ref|XP_006345366.1| | 3e-16 | PREDICTED: cell division control protein 48 homolog C-like [Solanum tuberosum] | |||||
JMFS167F02 | Sequence | 614 | 007736 (7) | ref|XP_006345366.1| | 1e-24 | PREDICTED: cell division control protein 48 homolog C-like [Solanum tuberosum] | |||||
JMSF002I24 | Sequence | 287 | 007736 (7) | ref|XP_006345366.1| | 2e-11 | PREDICTED: cell division control protein 48 homolog C-like [Solanum tuberosum] | 676 | 012793 (4) | ref|XP_011083573.1| | 5e-21 | PREDICTED: cell division control protein 48 homolog C-like [Sesamum indicum] |
JMSF040G06 | Sequence | 600 | 007736 (7) | ref|XP_006345366.1| | 6e-27 | PREDICTED: cell division control protein 48 homolog C-like [Solanum tuberosum] | 908 | 012793 (4) | ref|XP_011084336.1| | 5e-64 | PREDICTED: cell division control protein 48 homolog C-like [Sesamum indicum] |
JMSF053A03 | Sequence | 664 | 007736 (7) | ref|XP_006345366.1| | 8e-27 | PREDICTED: cell division control protein 48 homolog C-like [Solanum tuberosum] | 916 | 012793 (4) | ref|XP_011084336.1| | 2e-51 | PREDICTED: cell division control protein 48 homolog C-like [Sesamum indicum] |
This contig is upended
. : . : . : . : . : . :
JMFS167F02+ TTTCAATCCCTATTCCTCCTAGTTCTGGCCCCTTTTTCCCCAAGTTAACAGC
JMFS053A03+ ACAGC
JMSF053A03+ ACAGC
____________________________________________________________
consensus TTTCAATCCCTATTCCTCCTAGTTCTGGCCCCTTTTTCCCCAAGTTAACAGC
. : . : . : . : . : . :
JMFS167F02+ GGGCGAGGAGGGTAAAACTTGCTTTCCTTTCAATAAAGAAACTTTCTTTTTCACCTTATT
JMFF011N12+ ATT
JMFS053A03+ GGGCGAGGAGGGTAAAACTTGCTTTCCTTTCAATAAAGAAACTTTCTTTTTCACCTTATT
JMSF053A03+ GGGCGAGGAGGGTAAAACTTGCTTTCCTTTCAATAAAGAAACTTTCTTTTTCACCTTATT
JMSF040G06+ TT
____________________________________________________________
consensus GGGCGAGGAGGGTAAAACTTGCTTTCCTTTCAATAAAGAAACTTTCTTTTTCACCTTATT
. : . : . : . : . : . :
JMFS167F02+ GGCATCACTGTTATTCACAACCTCCACTTCCATAACTTTAGCGTTCGATTTGGGAGTGGT
JMFF011N12+ GGCATCACTGTTATTCACAACCTCCACTTCCATAACTTTAGCGTTCGATTTGGGAGTGGT
JMFS053A03+ GGCATCACTGTTATTCACAACCTCCACTTCCATAACTTTAGCGTTCGATTTGGGAGTGGT
JMSF053A03+ GGCATCACTGTTATTCACAACCTCCACTTCCATAACTTTAGCGTTCGATTTGGGAGTGGT
JMSF040G06+ GGCATCACTGTTATTCACAACCTCCACTTCCATAACTTTAGCGTTCGATTTGGGAGTGGT
____________________________________________________________
consensus GGCATCACTGTTATTCACAACCTCCACTTCCATAACTTTAGCGTTCGATTTGGGAGTGGT
. : . : . : . : . : . :
JMFS167F02+ TTTTGCCTTCTGTTCGCTGTATTGGTTTCGAAGCATGGACCGCATCAAATCGTGCTTCGG
JMFF011N12+ TTTTGCCTTCTGTTCGCTGTATTGGTTTCGAAGCATGGACCGCATCAAATCGTGCTTCGG
JMFS053A03+ TTTTGCCTTCTGTTCGCTGTATTGGTTTCGAAGCATGGACCGCATCAAATCGTGCTTCGG
JMSF053A03+ TTTTGCCTTCTGTTCGCTGTATTGGTTTCGAAGCATGGACCGCATCAAATCGTGCTTCGG
JMSF040G06+ TTTTGCCTTCTGTTCGCTGTATTGGTTTCGAAGCATGGACCGCATCAGATCGTGCTTCGG
____________________________________________________________
consensus TTTTGCCTTCTGTTCGCTGTATTGGTTTCGAAGCATGGACCGCATCAAATCGTGCTTCGG
. : . : . : . : . : . :
JMFS167F02+ CTCAATCTTCTCTCCGTAAACCGCATCCAGCGATGAGGATGAAGTAGGCGTGGAATCACT
JMFF011N12+ CTCAATCTTCTCTCCGTAAACCGCATCCAGCGATGAGGATGAAGTAGGCGTGGAATCACT
JMFS053A03+ CTCAATCTTCTCTCCGTAAACCGCATCCAGCGATGAGGATGAAGTAGGCGTGGAATCACT
JMSF053A03+ CTCAATCTTCTCTCCGTAAACCGCATCCAGCGATGAGGATGAAGTAGGCGTGGAATCACT
JMSF040G06+ CTCAATCTTCTCTCCGTAAACCGCATCCAGCGATGAGGATGAAGTAGGCGTGGAATCACT
____________________________________________________________
consensus CTCAATCTTCTCTCCGTAAACCGCATCCAGCGATGAGGATGAAGTAGGCGTGGAATCACT
. : . : . : . : . : . :
JMFS167F02+ CCCGGCCTCAGAAGACTCGGAATCCGACGACGACAATTCCTCCTTCCTTTGCATATTCCT
JMFS158E12+ CTTCCTTTGCATATTCCT
JMFF011N12+ CCCGGCCTCAGAAGACTCGGAATCCGACGACGACAATTCCTCCTTCCTTTGCATATTCCT
JMFS053A03+ CCCGGCCTCAGAAGACTCGGAATCCGACGACGACAATTCCTCCTTCCTTTGCATATTCCT
JMSF053A03+ CCCGGCCTCAGAAGACTCGGAATCCGACGACGACAATTCCTCCTTCCTTTGCATATTCCT
JMSF040G06+ CCCGGCCTCAGAAGACTCGGAATCCGACGACGACAATTCCTCCTTCCTTTGCATATTCCT
____________________________________________________________
consensus CCCGGCCTCAGAAGACTCGGAATCCGACGACGACAATTCCTCCTTCCTTTGCATATTCCT
. : . : . : . : . : . :
JMFS167F02+ AAGATGTTGAGCCTCGATTTGCTGCAATCTCTTCTCGCTCTCGTCGATTCTCCTCGGTAT
JMFS158E12+ AAGATGTTGAGCCTCGATTTGCTGCAATCTCTTCTCGCTCTCGTCGATTCTCCTCGGTAT
JMFF011N12+ AAGATGTTGAGCCTCGATTTGCTGCAATCTCTTCTCGCTCTCGTCGATTCTCCTCGGTAT
JMFS053A03+ AAGATGTTGAGCCTCGATTTGCTGCAATCTCTTCTCGCTCTCGTCGATTCTCCTCGGTAT
JMSF053A03+ AAGATGTTGAGCCTCGATTTGCTGCAATCTCTTCTCGCTCTCGTCGATTCTCCTCGGTAT
JMSF040G06+ AAGATGTTGAGCCTCGATTTGCTGCAATCTCTTCTCGCTCTCGTCGATTCTCCTCGGTAT
____________________________________________________________
consensus AAGATGTTGAGCCTCGATTTGCTGCAATCTCTTCTCGCTCTCGTCGATTCTCCTCGGTAT
. : . : . : . : . : . :
JMFS167F02+ CTTTCTGGGGGGATTCGCTTGGTCGCTGCTCTCATCGCTGCTGTCTTCTACCAAGCTACC
JMFS158E12+ CTTTCTGGGGGGATTCGCTTGGTCGCTGCTCTCATCGCTGCTGTCTTCTACCAAGCTACC
JMFF011N12+ CTTTCTGGGGGGATTCGCTTGGTCGCTGCTCTCATCGCTGCTGTCTTCTACCAAGCTACC
JMFS053A03+ CTTTCTGGGGGGATTCGCTTGGTCGCTGCTCTCATCGCTGCTGTCTTCTACCAAGCTACC
JMSF053A03+ CTTTCTGGGGGGATTCGCTTGGTCGCTGCTCTCATCGCTGCTGTCTTCTACCAAGCTACC
JMSF040G06+ CTTTCTGGGGGGATTCGCTTGGTCGCTGCTCTCATCGCTGCTGTCTTCTACCAAGCTACC
JMSF002I24+ GATTCGCNTGGTCGCTGCTCTCATCGCTGCTGTCTTCTACCAAGCTACC
____________________________________________________________
consensus CTTTCTGGGGGGATTCGCTTGGTCGCTGCTCTCATCGCTGCTGTCTTCTACCAAGCTACC
. : . : . : . : . : . :
JMFS167F02+ TCTCGAATTGATGGTCTGAAGGACGTCCTGAACGCGTTTGGTGAATGGCTGCACCTTCTG
JMFS158E12+ TCTCGAATTGATGGTCTGAAGGACGTCCTGACCCCCCTTGGTGAATGGCTGCACCTTCTG
JMFF011N12+ TCTCGAATTGATGGTCTGAAGGACGTCCTGAACGCGTTTGGTGAATGGCTGCACCTTCTG
JMFS053A03+ TCTCGAATTGATGGTCTGAAGGACGTCCTGAACGCGTTTGGTGAATGGCTGCACCTTTTG
JMSF053A03+ TCTCGAATTGATGGTCTGAAGGACGTCCTGAACGCGTTTGGTGAATGGCTGCACCTTCTG
JMSF040G06+ TCTCGAATTGATGGTCTGAAGGACGTCCTGAACGCGTTTGGTGAATGGCTGCACCTTCTG
JMSF002I24+ TCTCGAATTGATGGTCTGAAGGACGTCCTGAACGCGTTTGGTGAATGGCTGCACCTTCTG
____________________________________________________________
consensus TCTCGAATTGATGGTCTGAAGGACGTCCTGAACGCGTTTGGTGAATGGCTGCACCTTCTG
. : . : . : . : . : . :
JMFS167F02+ CCGCCCATA-CTGGGGGTAAGCAGAGCGAAGATGATCTACGATCTGCTCGGCGGTGGAGT
JMFS158E12+ CCGCCCATA-CTGGGGGTAAGCAGAGCGAAGATGATCTACGATCTGCTCGGCGGTGGAGT
JMFF011N12+ CCGCCCATA-CTGGGGGTAAGCAGAGCGAAGATGATCTACGATCTGCTCGGCGGTGGAGT
JMFS053A03+ CCGCCCATATATGGGGGTAAGCAGAGCGAAGATGATTTACGATATGATCGGCGGTGGAGT
JMSF053A03+ CCGCCCATA-CTGGGGGTAAGCAGAGCGAAGATGATCTACGATCTGCTCGGCGGTGGAGT
JMSF040G06+ CCGCCCATA-CTGGGGGTAAGCAGAGCGAAGATGATCTACGATCTGCTCGGCGGTGGAGT
JMSF002I24+ CCGCCCATA-CTGGGGGTAAGCAGAGCGAAGATGATCTACGATCTGCTCGGCGGTGGAGT
____________________________________________________________
consensus CCGCCCATA-CTGGGGGTAAGCAGAGCGAAGATGATCTACGATCTGCTCGGCGGTGGAGT
. : . : . : . : . : . :
JMFS167F02+ ACTTGCTTCTACATGTTTCTATG
JMFS158E12+ ACTTGCTTCTACATGTTTCTATGTGTCTGCGAAGCGCCTGAAGGCCGCCGCCGCCTGACC
JMFF011N12+ ACTTGCTTCTACATGTTTCTATGTGTCTGCGAAGCGCCTGAAGGCCGCCGCCGCCTGACC
JMFS053A03+ ACTTGATTATACATGTTTATATGTG
JMSF053A03+ ACTTGCTTCTACATGTTTCTATGTGTCTGCGAAGCGCCTGAAGGCCGCCGCCGCCTGACC
JMSF040G06+ ACTTGCTTCTACATGTTTCTATGTGTCTGCGAAGCGCCTGAAGGCCGCCGCCGCCTGACC
JMSF002I24+ ACTTGCTTCTACATGTTTCTATGTGTCTGCGAAGCGCCTGAAGGCCGCCGCCGCCTGACC
____________________________________________________________
consensus ACTTGCTTCTACATGTTTCTATGTGTCTGCGAAGCGCCTGAAGGCCGCCGCCGCCTGACC
. : . : . : . : . : . :
JMFS158E12+ TTCTTCCCTCGCTTCCTCGCCGTTTGAAGCAAGGGCTTA
JMFF011N12+ TTCTTCCCT-GCTTCATCGCCGTTTGAAGCAAGGGCTTAT
JMSF053A03+ TTCTTCCCT-GCTTCATCGCCGTTTGAAGCAAGGGCTTATGGGACTTTTTCTGCCGC
JMSF040G06+ TTCTTCCCT-GCTTCATCGCCGTTTGAAGCAAGGGCTTATGGGACTTTTTCTGCCGC
JMSF002I24+ TTCTTCCCT-GCTTCATCGCCGTTTGAAGCAAGGGCTTATGGGACTTTTTCTGCCGCTCC
____________________________________________________________
consensus TTCTTCCCT-GCTTCATCGCCGTTTGAAGCAAGGGCTTATGGGACTTTTTCTGCCGCTCC