Contig 007733:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002M11Sequence330007733 (3)707012494 (5)dbj|BAO57283.1|1e-35Myb family transcription factor [Ipomoea nil]
JMSF001D08Sequence235007733 (3)731012494 (5)dbj|BAO57283.1|3e-35Myb family transcription factor [Ipomoea nil]
JMSF002B07Sequence189007733 (3)724012494 (5)dbj|BAO57283.1|1e-67Myb family transcription factor [Ipomoea nil]

Alignment

This contig is upended


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JMFF002M11+                                    AGATTCCCTCNTTAAGGAAAAGGGATAAGCTCNGN
                      ____________________________________________________________
consensus                                      AGATTCCCTCNTTAAGGAAAAGGGATAAGCTCNGN
 
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JMFF002M11+           CCCTGCTNGATTCAACTTAAAAACGGNGAAAAATNGGAAACTGACNCCGATATAAGCCCC
                      ____________________________________________________________
consensus             CCCTGCTNGATTCAACTTAAAAACGGNGAAAAATNGGAAACTGACNCCGATATAAGCCCC
 
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JMFF002M11+           AAAAATTTATAGATAATTGCNGAACAAAATAAGGGAATTTCNCGNACCCCCCNAATTTCC
JMSF001D08+           AAAAATTTNTAGATAATTGCNGAACAAAATAAGGGAATTTCCCGNACNCCCCNAATTTCC
JMSF002B07+                                                                AATTTCC
                      ____________________________________________________________
consensus             AAAAATTTATAGATAATTGCNGAACAAAATAAGGGAATTTCCCGNACCCCCCNAATTTCC
 
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JMFF002M11+           CNGAAACNCCCGGAGATTGAACAAAAGGGTNCGGNGAAAATCAGCAAAACTGCCGAAAAA
JMSF001D08+           CNGAAACGCCCGGNGNTTGAACNAAAGGGTNCGGTGAAAATCNGCNAAACTGCCG-AAAA
JMSF002B07+           CAGAAACGCCCGGAGATTGAACAAAAGGGTNCGGTGAAAATCNGCNAAACTGCCG-AAAA
                      ____________________________________________________________
consensus             CAGAAACGCCCGGAGATTGAACAAAAGGGTNCGGTGAAAATCAGCAAAACTGCCG-AAAA
 
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JMFF002M11+           AAAAGGTGTTTCAGTGAACGGAAAAGCTNGAAGCTTCGATNTTGAAGCAGAGATTAAACT
JMSF001D08+           AAAAGGTGTTTCNGTGAACGGAAAAGCTNGAAGCTTCGATNTTGAAGCNGNGNTTNAACT
JMSF002B07+           AAAAGGTGTTTCNGTGAACGGAAAAGCTNGAAGCTTCGATNTTGAAGCNGNGATTAAACT
                      ____________________________________________________________
consensus             AAAAGGTGTTTCAGTGAACGGAAAAGCTNGAAGCTTCGATNTTGAAGCAGAGATTAAACT
 
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JMFF002M11+           NTTTTNTCAGAGGAGAAGATGAAGGAGTAGAGAGAAGGAAAAAAAAAAATTATTT     
JMSF001D08+           NTTTTNTCNGAGGNGAAGATGAAGGNGTNGAGAGAAGGAAAAAAAAAAATTATTT     
JMSF002B07+           NTTTTNTCNGAGGNGAAGATGAAGGNGTAGAGAGAAGGAAAAAAAAAAATTATTTAGGTC
                      ____________________________________________________________
consensus             NTTTTNTCAGAGGAGAAGATGAAGGAGTAGAGAGAAGGAAAAAAAAAAATTATTTAGGTC