Contig 007727:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF001B23Sequence225007727 (3)291004683 (19)gb|AAC12797.1|5e-23adenosine triphosphatase [Vigna radiata]
JMSF039E22Sequence596007727 (3)ref|XP_011098923.1|3e-63PREDICTED: membrane-anchored ubiquitin-fold protein 4 [Sesamum indicum]572007727 (3)ref|XP_011098923.1|2e-63PREDICTED: membrane-anchored ubiquitin-fold protein 4 [Sesamum indicum]

Alignment

This contig is upended


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JMSF039E22+                                                    ACGGCAACTAACTACACAC
                      ____________________________________________________________
consensus                                                      ACGGCAACTAACTACACAC
 
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rJMSF039E22-                                 GTGTAGGTCATATATATATATATATATAAGAATATCT
JMSF039E22+           GTTTATGTTGGTTGGTACAGAATGTGTAGGTCATATATATATATATATATAAGAATATCT
                      ____________________________________________________________
consensus             GTTTATGTTGGTTGGTACAGAATGTGTAGGTCATATATATATATATATATAAGAATATCT
 
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rJMSF039E22-          CCATCCATGAGGTATAATACTGTTTACAGATTATTGTTTGTTTGAGGAATACTTGATTCA
JMSF039E22+           CCATCCATGAGGTATAATACTGTTTACAGATTATTGTTTGTTTGAGGAATACTTGATTCA
                      ____________________________________________________________
consensus             CCATCCATGAGGTATAATACTGTTTACAGATTATTGTTTGTTTGAGGAATACTTGATTCA
 
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rJMSF039E22-          CAATCCCCACACCAACAAATCTCATTCACAATATGGAGCACGAACACATGTTTTTCTTTG
JMSF039E22+           CAATCCCCACACCAACAAATCTCATTCACAATATGGAGCACGAACACATGTTTTTCTTTG
                      ____________________________________________________________
consensus             CAATCCCCACACCAACAAATCTCATTCACAATATGGAGCACGAACACATGTTTTTCTTTG
 
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rJMSF039E22-          GAGCCTCCTCGATCTTCTTTTCTGATTTTGCTTTAGCTACAGATGGCTGTACAACAGCAT
JMSF039E22+           GAGCCTCCTCGATCTTCTTTTCTGATTTTGCTTTAGCTACAGATGGCTGTACAACAGCAT
                      ____________________________________________________________
consensus             GAGCCTCCTCGATCTTCTTTTCTGATTTTGCTTTAGCTACAGATGGCTGTACAACAGCAT
 
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rJMSF039E22-          GCATGGTAATTACACCTTTAGGTAGCTCTCCAAAAGGCATCTTGCACTGACCAACAGTCT
JMSF039E22+           GCATGGTAATTACACCTTTAGGTAGCTCTCCAAAAGGCATCTTGCACTGACCAACAGTCT
                      ____________________________________________________________
consensus             GCATGGTAATTACACCTTTAGGTAGCTCTCCAAAAGGCATCTTGCACTGACCAACAGTCT
 
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rJMSF039E22-          TGCTGTTTTCTAAAATTTTCCCAGCGCTGATCAATTTTACATCATTTGCTGCCTTGGGTG
JMSF039E22+           TGCTGTTTTCTAAAATTTTCCCAGCGCTGATCAATTTTACATCATTTGCTGCCTTGGGTG
                      ____________________________________________________________
consensus             TGCTGTTTTCTAAAATTTTCCCAGCGCTGATCAATTTTACATCATTTGCTGCCTTGGGTG
 
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rJMSF039E22-          CAATTTTTTTATCTTTAGGCCATTCGGCAACGATTCTCTCCTTTAGCATAGCTACAGTAG
JMSF039E22+           CAATTTTTTTATCTTTAGGCCATTCGGCAACGATTCTCTCCTTTAGCATAGCTACAGTAG
                      ____________________________________________________________
consensus             CAATTTTTTTATCTTTAGGCCATTCGGCAACGATTCTCTCCTTTAGCATAGCTACAGTAG
 
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rJMSF039E22-          AAGCGGGGGAATACCGAAACGGACCAATATCCGATCCATCGTACAACCGGAACTTGAGCT
JMSF039E22+           AAGCGGGGGAATACCGAAACGGACCAATATCCGATCCATCGTACAACCGGAACTTGAGCT
                      ____________________________________________________________
consensus             AAGCGGGGGAATACCGAAACGGACCAATATCCGATCCATCGTACAACCGGAACTTGAGCT
 
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rJMSF039E22-          CTACCAAATCCTCCTCCGGCATTTGCAATCGGAAACCGTCTCCTCCTCAATCGCCCTTCC
JMSF039E22+           CTACCAAATCCTCCTCCGGCATTTGCAATCGGAAACCGTCTCCTCCTCAATCGCCCTTCC
JMSF001B23+                          CCGGCATTTGCAATCGGAAACCGTCTCCTCCTCAATCGCCCTTCC
                      ____________________________________________________________
consensus             CTACCAAATCCTCCTCCGGCATTTGCAATCGGAAACCGTCTCCTCCTCAATCGCCCTTCC
 
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rJMSF039E22-          GCTCCCGACACC                                                
JMSF039E22+           GCTCCCGACACC                                                
JMSF001B23+           GCTCCCGACACCAGTGGATTTAAAAAAAGGAGATGACTATGATGATACACCAGATTTGAT
                      ____________________________________________________________
consensus             GCTCCCGACACCAGTGGATTTAAAAAAAGGAGATGACTATGATGATACACCAGATTTGAT
 
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JMSF001B23+           ACGTTTTTGCTAATCGTGGAAGTTTGATTAAACTAATGCGAAAAGAGATGAGGCGAATCA
                      ____________________________________________________________
consensus             ACGTTTTTGCTAATCGTGGAAGTTTGATTAAACTAATGCGAAAAGAGATGAGGCGAATCA
 
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JMSF001B23+           GTTTTCCAGCACTACTCGCAGTAAAGAAAACCCTAAGGACCCGATATTCACGCTCACTCA
                      ____________________________________________________________
consensus             GTTTTCCAGCACTACTCGCAGTAAAGAAAACCCTAAGGACCCGATATTCACGCTCACTCA