Contig 007722:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS071C05Sequence634007722 (7)ref|XP_010327228.1|3e-49PREDICTED: protein strawberry notch homolog 1 isoform X2 [Solanum lycopersicum]
JMFS115C12Sequence621007722 (7)emb|CDP19351.1|2e-75unnamed protein product [Coffea canephora]
JMFS121C07Sequence580007722 (7)ref|XP_010327228.1|3e-47PREDICTED: protein strawberry notch homolog 1 isoform X2 [Solanum lycopersicum]
JMFS161F08Sequence561007722 (7)ref|XP_010327228.1|3e-43PREDICTED: protein strawberry notch homolog 1 isoform X2 [Solanum lycopersicum]
JMFS165D12Sequence596007722 (7)ref|XP_010327228.1|2e-42PREDICTED: protein strawberry notch homolog 1 isoform X2 [Solanum lycopersicum]
JMSF021C10Sequence687007722 (7)ref|XP_009595784.1|3e-60PREDICTED: protein strawberry notch isoform X2 [Nicotiana tomentosiformis]716017139ref|XP_006422308.1|2e-62hypothetical protein CICLE_v10006112mg [Citrus clementina] gb|ESR35548.1| hypoth
JMSF030I12Sequence630007722 (7)ref|XP_010327228.1|3e-63PREDICTED: protein strawberry notch homolog 1 isoform X2 [Solanum lycopersicum]667017185ref|XP_006422308.1|3e-71hypothetical protein CICLE_v10006112mg [Citrus clementina] gb|ESR35548.1| hypoth

Alignment

This contig is upended


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JMFS115C12+                                   CTGACAAGCATACACCAATGTCTCAATCTGCAAGCA
                      ____________________________________________________________
consensus                                     CTGACAAGCATACACCAATGTCTCAATCTGCAAGCA
 
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JMFS115C12+           GGATAATGCTTNTGAGCTTTCCAGCTCATCTTTGATCTTGAGATCATAGGTGGGTTCAGG
JMSF030I12+                                                   AGATCATAGGTGGGTTCAGG
JMSF021C10+                                                   AGATCATAGGTGGGTTCAGG
                      ____________________________________________________________
consensus             GGATAATGCTTNTGAGCTTTCCAGCTCATCTTTGATCTTGAGATCATAGGTGGGTTCAGG
 
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JMFS115C12+           TGGCTGTACTGCAGACAAGGAGGACGTCTCCACAACAGGATCTGGATGAGGAGGTCCAAT
JMSF030I12+           TGGCTGTACTGCAGACAAGGAGGACGTCTCCACAACAGGATCTGGATGAGGAGGTCCAAT
JMFS121C07+                                                       GATGAGGAGGTCCAAT
JMSF021C10+           TGGCTGTACTGCAGACAAGGAGGACGTCTCCACAACAGGATCTGGATGAGGAGGTCCAAT
JMFS071C05+                                                  ATCTGGATGAGGAGGTCCAAT
                      ____________________________________________________________
consensus             TGGCTGTACTGCAGACAAGGAGGACGTCTCCACAACAGGATCTGGATGAGGAGGTCCAAT
 
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JMFS115C12+           AGATAACTTGGGAGGCCGATAGTCTGTAAAAGTTTCACCAACCAATCCACCTTCCTCTTC
JMSF030I12+           AGATAACTTGGGAGGCCGATAGTCTGTAAAAGTTTCACCAACCAATCCACCTTCCTCTTC
JMFS121C07+           AGATAACTTGGNAGGCCGATAGTCTGTAAAAGTTTCACCAACCAATCCACCTTCCTCTTC
JMFS161F08+                          CCGATAGTCTGTAAAAGTTTCACCAACCAATCCACCTTCCTCTTC
JMSF021C10+           AGATAACTTGGGAGGCCGATAGTCTGTAAAAGTTTCACCAACCAATCCACCTTCCTCTTC
JMFS071C05+           AGATAACTTGGGAGGCCGATAGTCTGTAAAAGTTTCACCAACCAATCCACCTTCCTCTTC
                      ____________________________________________________________
consensus             AGATAACTTGGGAGGCCGATAGTCTGTAAAAGTTTCACCAACCAATCCACCTTCCTCTTC
 
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JMFS115C12+           TTCTCGTTCCACTTCAATAGCAACCTCATTGACTTCTTCGGGAGGCGGGGGAGGAGGTGG
JMSF030I12+           TTCTCGTTCCACTTCAATAGCAACCTCATTGACTTCTTCGGGAGGCGGGGGAGGAGGTGG
JMFS121C07+           TTCTCGTTCCACTTCAATAGCAACCTCATTGACTTCTTCGGGAGGCGGGGGAGGAGGTGG
JMFS161F08+           TTCTCGTTCCACTTCAATAGCAACCTCATTGACTTCTTCGGGAGGCGGGGGAGGAGGTGG
JMSF021C10+           TTCTCGTTCCACTTCAATAGCAACCTCATTGACTTCTTCGGGAGGCGGGGGAGGAGGTGG
JMFS071C05+           TTCTCGTTCCACTTCAATAGCAACCTCATTGACTTCTTCGGGAGGCGGGGGAGGAGGTGG
                      ____________________________________________________________
consensus             TTCTCGTTCCACTTCAATAGCAACCTCATTGACTTCTTCGGGAGGCGGGGGAGGAGGTGG
 
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JMFS115C12+           TGGACGCAGGTGAGCAGGAATGGGTGGAGAGGGAAAGAACTGCTTTATTTTGGAGAGATC
JMSF030I12+           TGGACGCAGGTGAGCAGGAATGGGTGGAGAGGGAAAGAACTGCTTTATTTTGGAGAGATC
JMFS121C07+           TGGACGCAGGTGAGCAGGAATGGGTGGAGAGGGAAAGAACTGCTTTATTTTGGAGAGATC
JMFS161F08+           TGGACGCAGGTGAGCAGGAATGGGTGGAGAGGGAAAGAACTGCTTTATTTTGGAGAGATC
JMSF021C10+           TGGACGCAGGTGAGCAGGAATGGGTGGAGAGGGAAAGAACTGCTTTATTTTGGAGAGATC
JMFS071C05+           TGGACGCAGGTGAGCAGGAATGGGTGGAGAGGGAAAGAACTGCTTTATTTTGGAGAGATC
JMFS165D12+               CGCAGGTGAGCAGGAATGGGTGGAGAGGGAAAGAACTGCTTTATTTTGGAGAGATC
                      ____________________________________________________________
consensus             TGGACGCAGGTGAGCAGGAATGGGTGGAGAGGGAAAGAACTGCTTTATTTTGGAGAGATC
 
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JMFS115C12+           AACAGCAAGGTCCACCGCACACTGGGGACAAGAGAAGCGTGTGAGGCCATGGGGAACGTT
JMSF030I12+           AACAGCAAGGTCCACCGCACACTGGGGACAAGAGAAGCGTGTGAGGCCATGGGGAACGTT
JMFS121C07+           AACAGCAAGGTCCACCGCACACTGGGGACAAGAGAAGCGTGTGAGGCCATGGGGAACGTT
JMFS161F08+           AACAGCAAGGTCCACCGCACACTGGGGACAAGAGAAGCGTGTGAGGCCATGGGGAACGTT
JMSF021C10+           AACAGCAAGGTCCACCGCACACTGGGGACAAGAGAAGCGTGTGAGGCCATGGGGAACGTT
JMFS071C05+           AACAGCAAGGTCCACCGCACACTGGGGACAAGAGAAGCGTGTGAGGCCATGGGGAACGTT
JMFS165D12+           AACAGCAAGGTCCACCGCACACTGGGGACAAGAGAAGCGTGTGAGGCCATGGGGAACGTT
                      ____________________________________________________________
consensus             AACAGCAAGGTCCACCGCACACTGGGGACAAGAGAAGCGTGTGAGGCCATGGGGAACGTT
 
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JMFS115C12+           AAGTATGGCCTTGCAATGAGCACAGGGTAACTGGATCTTGGTGGGATCGATGCCATGTGC
JMSF030I12+           AAGTATGGCCTTGCAATGAGCACAGGGTAACTGGATCTTGGTGGGATCGATGCCATGTGC
JMFS121C07+           AAGTATGGCCTTGCAATGAGCACAGGGTAACTGGATCTTGGTGGGATCGATGCCATGTGC
JMFS161F08+           AAGTATGGCCTTGCAATGAGCACAGGGTAACTGGATCTTGGTGGGATCGATGCCATGTGC
JMSF021C10+           AAGTATGGCCTTGCAATGAGCACAGGGTAACTGGATCTTGGTGGGATCGATGCCATGTGC
JMFS071C05+           AAGTATGGCCTTGCAATGAGCACAGGGTAACTGGATCTTGGTGGGATCGATGCCATGTGC
JMFS165D12+           AAGTATGGCCTTGCAATGAGCACAGGGTAACTGGATCTTGGTGGGATCGATGCCATGTGC
                      ____________________________________________________________
consensus             AAGTATGGCCTTGCAATGAGCACAGGGTAACTGGATCTTGGTGGGATCGATGCCATGTGC
 
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JMFS115C12+           TGGAGCGCCGCTGCGCAGTTGCTGAGCGTGGGCGGGCATGAGCTCGGGAGGGAGCATCTG
JMSF030I12+           TGGAGCGCCGCTGCGCAGTTGCTGAGCGTGGGCGGGCATGAGCTCGGGAGGGAGCATCTG
JMFS121C07+           TGGAGCGCCGCTGCGCAGTTGCTGAGCGTGGGCGGGCATGAGCTCGGGAGGGAGCATCTG
JMFS161F08+           TGGAGCGCCGCTGCGCAGTTGCTGAGCGTGGGCGGGCATGAGCTCGGGAGGGAGCATCTG
JMSF021C10+           TGGAGCGCCGCTGCGCAGTTGCTGAGCGTGGGCGGGCATGAGCTCGGGAGGGAGCATCTG
JMFS071C05+           TGGAGCGCCGCTGCGCAGTTGCTGAGCGTGGGCGGGCATGAGCTCGGGAGGGAGCATCTG
JMFS165D12+           TGGAGCGCCGCTGCGCAGTTGCTGAGCGTGGGCGGGCATGAGCTCGGGAGGGAGCATCTG
                      ____________________________________________________________
consensus             TGGAGCGCCGCTGCGCAGTTGCTGAGCGTGGGCGGGCATGAGCTCGGGAGGGAGCATCTG
 
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JMFS115C12+           TGGCAATTGACATGTGGGGCACATAAACTCGGTCAGTCCGGGTCCGACCGTCAATATCAT
JMSF030I12+           TGGCAATTGACATGTGGGGCACATAAACTCGGTCAGTCCGGGTCCGACCGTCAATATCAT
JMFS121C07+           TGGCAATTGACATGTGGGGCACATAAACTCGGTCAGTCCGGGTCCGACCGTCAATATCAT
JMFS161F08+           TGGCAATTGACATGTGGGGCACATAAACTCGGTCAGTCCGGGTCCGACCGTCAATATCAT
JMSF021C10+           TGGCAATTGACATGTGGGGCACATAAACTCGGTCAGTCCGGGTCCGACCGTCAATATCAT
JMFS071C05+           TGGCAATTGACATGTGGGGCACATAAACTCGGTCAGTCCGGGTCCGACCGTCAATATCAT
JMFS165D12+           TGGCAATTGACATGTGGGGCACATAAACTCGGTCAGTCCGGGTCCGACCGTCAATATCAT
                      ____________________________________________________________
consensus             TGGCAATTGACATGTGGGGCACATAAACTCGGTCAGTCCGGGTCCGACCGTCAATATCAT
 
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JMFS115C12+           CTTGCAACCAGCACACCGAACTTGGCAACCCGCAACTCTTCCGTC               
JMSF030I12+           CTTGCAACCAGCACACCGAACTTGGCAACCCGCAACTCTTCCGTCGTTGGGAGCTGCGGC
JMFS121C07+           CTTGCAACCAGCACACCGAACTTGGCAACCCGCAACTCTTCCGTCGTTGGGAGCTGCGGC
JMFS161F08+           CTTGCAACCAGCACACCGAACTTGGCAACCCGCAACTCTTCCGTCGTTGGGAGCTGCGGC
JMSF021C10+           CTTGCAACCAGCACACCGAACTTGGCAACCCGCAACTCTTCCGTCGTTGGGAGCTGCGGC
JMFS071C05+           CTTGCAACCAGCACACCGAACTTGGCAACCCGCAACTCTTCCGTCGTTGGGAGCTGCGGC
JMFS165D12+           CTTGCAACCAGCACACCGAACTTGGCAACCCGCAACTCTTCCGTCGTTGGGAGCTGCGGC
                      ____________________________________________________________
consensus             CTTGCAACCAGCACACCGAACTTGGCAACCCGCAACTCTTCCGTCGTTGGGAGCTGCGGC
 
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JMSF030I12+           GGCGGCGGCGGAGGGAGGAGGTGGAGGGGCGATTGGAAGAGGCGGCACCGAAGGCTGTCC
JMFS121C07+           GGCGGCGGCGGAGGGAGGAGGTGGAGGGGCGATTGGAAGAGGCGGCACCGAAGGCTGTCC
JMFS161F08+           GGCGGCGGCGGAGGGAGGAGGTGGAGGGGCGATTGGAAGAGGCGGCACCGAAGGCTGTCC
JMSF021C10+           GGCGGCGGCGGAGGGAGGAGGTGGAGGGGCGATTGGAAGAGGCGGCACCGAAGGCTGTCC
JMFS071C05+           GGCGGCGGCGGAGGGAGGAGGTGGAGGGGCGATTGGAAGAGGCGGCACCGAAGGCTGTCC
JMFS165D12+           GGCGGCGGCGGAGGGAGGAGGTGGAGGGGCGATTGGAAGAGGCGGCACCGAAGGCTGTCC
                      ____________________________________________________________
consensus             GGCGGCGGCGGAGGGAGGAGGTGGAGGGGCGATTGGAAGAGGCGGCACCGAAGGCTGTCC
 
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JMSF030I12+           CATATTT                                                     
JMFS121C07+           CATATTTCTAAATGAACAGAAGAG                                    
JMFS161F08+           CATATTTCTAAATGAACAGAAGAGAGACAGAGAGAA                        
JMSF021C10+           CATATTTCTAAATGAACAGAAGAGAGACAGAGAGAACAATATTAGATTCAACTCTGCT  
JMFS071C05+           CATATTTCTAAATGAACAGAAGAGAGACAGAGAGAACAATATTAGATTCAACTCTGCTCG
JMFS165D12+           CATATTTCTAAATGAACAGAAGAGAGACAGAGAGAACAATATTAGATTCAACTCTGCTCG
                      ____________________________________________________________
consensus             CATATTTCTAAATGAACAGAAGAGAGACAGAGAGAACAATATTAGATTCAACTCTGCTCG
 
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JMFS071C05+           AAATTGCCTGCGA                                               
JMFS165D12+           AAATTGCCTGCGATTTTTTCTTTTTTTAAAGCTAATTGAGTTGAGAAATTGCGATGAGTA
                      ____________________________________________________________
consensus             AAATTGCCTGCGATTTTTTCTTTTTTTAAAGCTAATTGAGTTGAGAAATTGCGATGAGTA
 
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JMFS165D12+           ATTGCAATTTAGAGTTGAGCCCCGAGCTAGAAGAAACAGTGAAGAGGATGCTGGGGCGGC
                      ____________________________________________________________
consensus             ATTGCAATTTAGAGTTGAGCCCCGAGCTAGAAGAAACAGTGAAGAGGATGCTGGGGCGGC