Contig 007691:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN035D03Sequence560007691 (2)ref|XP_009788128.1|2e-91PREDICTED: MADS-box protein CMB1-like [Nicotiana sylvestris]
JMFS134A07Sequence627007691 (2)ref|NP_001234201.1|3e-65TAGL2 transcription factor [Solanum lycopersicum] gb|AAM33104.2| TAGL2 transcrip

Alignment

This contig is upended


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JMFN035D03+                           AGCATTTGCTCCCTTGGTGAAGCTCAGCTAGCGGATCCAGCATA
                      ____________________________________________________________
consensus                             AGCATTTGCTCCCTTGGTGAAGCTCAGCTAGCGGATCCAGCATA
 
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JMFN035D03+           GATGGGGTCTGCCTTGACCGGATTTGCTTTAAGGAGGCCTCCAATTGATTCTCAAGTTGC
                      ____________________________________________________________
consensus             GATGGGGTCTGCCTTGACCGGATTTGCTTTAAGGAGGCCTCCAATTGATTCTCAAGTTGC
 
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JMFN035D03+           TCCAGCTCCTTTGTGCTCAATGGACCCAGATCTTCCCCAAGAAGATTTCTTTGGGATCGT
                      ____________________________________________________________
consensus             TCCAGCTCCTTTGTGCTCAATGGACCCAGATCTTCCCCAAGAAGATTTCTTTGGGATCGT
 
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JMFN035D03+           TGAAGGAGCTCAACCCTAGCTTTTAGCCTTAGATATTCATGGTAGTTGTTCTGAGTGTCA
                      ____________________________________________________________
consensus             TGAAGGAGCTCAACCCTAGCTTTTAGCCTTAGATATTCATGGTAGTTGTTCTGAGTGTCA
 
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JMFN035D03+           CTGGCTGGTTGGTTGGCCTCCAAATGAGCATAGCTGCAACGTTGGTACCTTTCAAGGGTC
                      ____________________________________________________________
consensus             CTGGCTGGTTGGTTGGCCTCCAAATGAGCATAGCTGCAACGTTGGTACCTTTCAAGGGTC
 
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JMFN035D03+           TTCATCATGCTAGAACTGCTGCAAAACTCATAGAGTTTTCCACGGTTGGAGAAGATGATG
JMFS134A07+                                   AACTCATAGAGCTTTCCCCTGTTGGAGAAGACGATG
                      ____________________________________________________________
consensus             TTCATCATGCTAGAACTGCTGCAAAACTCATAGAGTTTTCCCCTGTTGGAGAAGATGATG
 
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JMFN035D03+           AGAGCAACTTCAGCATCACAAAGAACAGAAAGTTCATAAGCCTTCTTGAGAAGCCCATTT
JMFS134A07+           AGTGCCACCTCAGCATCACAGAGCACAGAAAGCTCATAAGCTTTCTTGAGCAGCCCATTT
                      ____________________________________________________________
consensus             AGTGCCACTTCAGCATCACAGAGCACAGAAAGTTCATAAGCTTTCTTGAGCAGCCCATTT
 
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JMFN035D03+           CTCCTCTTAGCAAAAGTAACCTGCCTGTTTATCTTGTTCTCTATCCTCTT          
JMFS134A07+           CTCCTCTTTGCAAATGTGACCTGTCTGTTTATCTTGTTCTCTATCCTCTTAAGCTCCACT
                      ____________________________________________________________
consensus             CTCCTCTTTGCAAATGTGACCTGTCTGTTTATCTTGTTCTCTATCCTCTTAAGCTCCACT
 
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JMFS134A07+           CTCCCTCTGCCCATTATTATCTGATCTCCCCTTTCTTCTCTTGGGTATAAGCTGATCTCT
                      ____________________________________________________________
consensus             CTCCCTCTGCCCATTATTATCTGATCTCCCCTTTCTTCTCTTGGGTATAAGCTGATCTCT
 
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JMFS134A07+           TCTCTCTCACCTCTGGCTACCCAACTTCTATGAAAGAAAGAAAGAAAAAAAAAAAAGCTA
                      ____________________________________________________________
consensus             TCTCTCTCACCTCTGGCTACCCAACTTCTATGAAAGAAAGAAAGAAAAAAAAAAAAGCTA
 
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JMFS134A07+           GCTAGCTCTATGTTTGCAGCATCATATCATTCCTTTTAACTTAACTCAATCTTGACCATT
                      ____________________________________________________________
consensus             GCTAGCTCTATGTTTGCAGCATCATATCATTCCTTTTAACTTAACTCAATCTTGACCATT
 
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JMFS134A07+           AAAACCCTAGAGAGAGAAAGCTAGACCTATACATATAGTGAGAGAGAGAGAGAGAAATGG
                      ____________________________________________________________
consensus             AAAACCCTAGAGAGAGAAAGCTAGACCTATACATATAGTGAGAGAGAGAGAGAGAAATGG