| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS008C11 | Sequence | 619 | 007676 (8) | ref|XP_009799603.1| | 2e-37 | PREDICTED: zinc finger CCCH domain-containing protein 30-like [Nicotiana sylves | |||||
| JMFS088C04 | Sequence | 625 | 007676 (8) | ref|XP_009799603.1| | 6e-34 | PREDICTED: zinc finger CCCH domain-containing protein 30-like [Nicotiana sylves | |||||
| JMFS100C02 | Sequence | 619 | 007676 (8) | ref|XP_009799603.1| | 1e-28 | PREDICTED: zinc finger CCCH domain-containing protein 30-like [Nicotiana sylves | |||||
| JMFS101H10 | Sequence | 607 | 007676 (8) | ref|XP_009799603.1| | 5e-34 | PREDICTED: zinc finger CCCH domain-containing protein 30-like [Nicotiana sylves | |||||
| JMFS116C07 | Sequence | 578 | 007676 (8) | ||||||||
| JMFS121F04 | Sequence | 577 | 007676 (8) | ref|XP_009799603.1| | 5e-31 | PREDICTED: zinc finger CCCH domain-containing protein 30-like [Nicotiana sylves | |||||
| JMFS125A11 | Sequence | 571 | 007676 (8) | ref|XP_009799603.1| | 5e-33 | PREDICTED: zinc finger CCCH domain-containing protein 30-like [Nicotiana sylves | |||||
| JMFS132G03 | Sequence | 591 | 007676 (8) | ref|XP_009799603.1| | 1e-23 | PREDICTED: zinc finger CCCH domain-containing protein 30-like [Nicotiana sylves | |||||
This contig is upended
. : . : . : . : . : . :
JMFS008C11+ AAGTT
____________________________________________________________
consensus AAGTT
. : . : . : . : . : . :
JMFS121F04+ TCAAGACATCAACACTACCATAT
JMFS125A11+ TGATCAATTTCAAGACATCAACACTACCATAT
JMFS008C11+ TGATTGACATCAACTCCTGGCTGAGAAATGATCAATTTCAAGACATCAACACTACCATAT
JMFS101H10+ TGATCAATTTCAAGACATCAACACTACCATAT
JMFS088C04+ TGATCAATTTCAAGACATCAACACTACCATAT
JMFS100C02+ CATAT
____________________________________________________________
consensus TGATTGACATCAACTCCTGGCTGAGAAATGATCAATTTCAAGACATCAACACTACCATAT
. : . : . : . : . : . :
JMFS121F04+ GTTGCAGCAACCATCAAGGGAGTCCTTTCCTCATTGACAATCTGTTTAGAGCCTTTCTTG
JMFS125A11+ GTTGCAGCAACCATCAAGGGAGTCCTTTCCTCATTGACAATCTGTTTAGAGCCTTTCTTG
JMFS008C11+ GTTGCAGCAACCATCAAGGGAGTCCTTTCCTCATTGACAATCTGTTTAGAGCCTTTCTTG
JMFS101H10+ GTTGCAGCAACCATCAAGGGAGTCCTTTCCTCATTGACAATCTGTTTAGAGCCTTTCTTG
JMFS132G03+ TGCAGCAACCATCAAGGGAGTCCTTTCCTCATTGACAATCTGTTTAGAGCCTATCGTG
JMFS088C04+ GTTGCAGCAACCATCAAGGGAGTCCTTTCCTCATTGACAATCTGTTTAGAGCCTTTCTTG
JMFS100C02+ GTTGCAGCAACCATCAAGGGAGTCCTTTCCTCATTGACAATCTGTTTAGAGCCTTTCTTG
____________________________________________________________
consensus GTTGCAGCAACCATCAAGGGAGTCCTTTCCTCATTGACAATCTGTTTAGAGCCTTTCTTG
. : . : . : . : . : . :
JMFS121F04+ CGAACCAACCAAAGTCCAACTTCATCAACTGCAGAAGGCTCATGCTCAATTGATCTTTTA
JMFS125A11+ CGAACCAACCAAAGTCCAACTTCATCAACTGCAGAAGGCTCATGCTCAATTGATCTTTTA
JMFS008C11+ CGAACCAACCAAAGTCCAACTTCATCAACTGCAGAAGGCTCATGCTCAATTGATCTTTTA
JMFS101H10+ CGAACCAACCAAAGTCCAACTTCATCAACTGCAGAAGGCTCATGCTCAATTGATCTTTTA
JMFS132G03+ CGAACCAACCAAAGTCCAAGTTCATCAACTGCAGAAGGCTCATGCTCAATTGATCTTTTA
JMFS088C04+ CGAACCAACCAAAGTCCAACTTCATCAACTGCAGAAGGCTCATGCTCAATTGATCTTTTA
JMFS100C02+ CGAACCAACCAAAGTCCAACTTCATCAACTGCAGAAGGCTCATGCTCAATTGATCTTTTA
____________________________________________________________
consensus CGAACCAACCAAAGTCCAACTTCATCAACTGCAGAAGGCTCATGCTCAATTGATCTTTTA
. : . : . : . : . : . :
JMFS121F04+ AAAGCCTCTACATCGTTGTTAGCAGCAAGTTCAAGAAAACTTGAAAAACAATCATCAGTC
JMFS125A11+ AAAGCCTCTACATCGTTGTTAGCAGCAAGTTCAAGAAAACTTGAAAAACAATCATCAGTC
JMFS008C11+ AAAGCCTCTACATCGTTGTTAGCAGCAAGTTCAAGAAAACTTGAAAAACAATCATCAGTC
JMFS101H10+ AAAGCCTCTACATCGTTGTTAGCAGCAAGTTCAAGAAAACTTGAAAAACAATCATCAGTC
JMFS132G03+ AAAGCCTCTACATCGTTGTTAGCAGCAAGTTCAAGAAAACTTGAAAAACAATCATCAGTC
JMFS088C04+ AAAGCCTCTACATCGTTGTTAGCAGCAAGTTCAAGAAAACTTGAAAAACAATCATCAGTC
JMFS100C02+ AAAGCCTCTACATCGTTGTTAGCAGCAAGTTCAAGAAAACTTGAAAAACAATCATCAGTC
JMFS116C07+ CAGCAAGTTCAAGAAAACTTGAAAAACAATCATCAGTC
____________________________________________________________
consensus AAAGCCTCTACATCGTTGTTAGCAGCAAGTTCAAGAAAACTTGAAAAACAATCATCAGTC
. : . : . : . : . : . :
JMFS121F04+ ACAACAGTAAGTTGGCTTGAGTCCATACTCAATTTTGTATCAGAATTAGATTGGCTGGTA
JMFS125A11+ ACAACAGTAAGTTGGCTTGAGTCCATACTCAATTTTGTATCAGAATTAGATTGGCTGGTA
JMFS008C11+ ACAACAGTAAGTTGGCTTGAGTCCATACTCAATTTTGTATCAGAATTAGATTGGCTGGTA
JMFS101H10+ ACAACAGTAAGTTGGCTTGAGTCCATACTCAATTTTGTATCAGAATTAGATTGGCTGGTA
JMFS132G03+ ACAACAGTAAGTTGGCTTGAGTCCATACTCAATTTTGTATCAGAATTAGATTGGATGGTA
JMFS088C04+ ACAACAGTAAGTTGGCTTGAGTCCATACTCAATTTTGTATCAGAATTAGATTGGCTGGTA
JMFS100C02+ ACAACAGTAAGTTGGCTTGAGTCCATACTCAATTTTGTATCAGAATTAGATTGGCTGGTA
JMFS116C07+ ACAACAGTAAGTTGGCTTGAGTCCATACTCAATTTTGTATCAGAATTAGATTGGCTGGTA
____________________________________________________________
consensus ACAACAGTAAGTTGGCTTGAGTCCATACTCAATTTTGTATCAGAATTAGATTGGCTGGTA
. : . : . : . : . : . :
JMFS121F04+ GATGAGCTAGAATTGGACTGGTCTGGACCACTGCACATGCTTCAGTCAACGAAGGATTAA
JMFS125A11+ GATGAGCTAGAATTGGACTGGTCTGGACCACTGCACATGCTTCAGTCAACGAAGGATTAA
JMFS008C11+ GATGAGCTAGAATTGGACTGGTCTGGACCACTGCACATGCTTCAGTCAACGAAGGATTAA
JMFS101H10+ GATGAGCTAGAATTGGACTGGTCTGGACCACTGCACATGCTTCAGTCAACGAAGGATTAA
JMFS132G03+ GATGAGCTAGAATTGGACTGGTCTGGACCACTGCACATGCTTCAGTCAACGAAGGATTAA
JMFS088C04+ GATGAGCTAGAATTGGACTGGTCTGGACCACTGCACATGCTTCAGTCAACGAAGGATTAA
JMFS100C02+ GATGAGCTAGAATTGGACTGGTATGGACCACTGCACATGCTTCAGTCAACGAAGGATTAA
JMFS116C07+ GATGAGCTAGAATTGGACTGGTCTGGACCACTGCACATGCTTCAGTCAACGAAGGATTAA
____________________________________________________________
consensus GATGAGCTAGAATTGGACTGGTCTGGACCACTGCACATGCTTCAGTCAACGAAGGATTAA
. : . : . : . : . : . :
JMFS121F04+ AAACGGAAGCTTTTCAAAGATCAACAGCGGCAAAGAGAGAAGGAACGGAACGTAATGCGA
JMFS125A11+ AAACGGAAGCTTTTCAAAGATCAACAGCGGCAAAGAGAGAAGGAACGGAACGTAATGCGA
JMFS008C11+ AAACGGAAGCTTTTCAAAGATCAACAGCGGCAAAGAGAGAAGGAACGGAACGTAATGCGA
JMFS101H10+ AAACGGAAGCTTTTCAAAGATCAACAGCGGCAAAGAGAGAAGGAACGGAACGTAATGCGA
JMFS132G03+ AAACGGAAGCTTTTCAAAGATCAACAGCGGCAAAGAGAGAAGGAACGGAACGTAATGCGA
JMFS088C04+ AAACGGAAGCTTTTCAAAGATCAACAGCGGCAAAGAGAGAAGGAACGGAACGTAATGCGA
JMFS100C02+ AAACGGAAGCTTTTCAAAGATCAACAGCGGCAAAGAGAGAAGGAACGGAACGTAATGCGA
JMFS116C07+ AAACGGAAGCTTTTCAAAGATCAACAGCGGCAAAGAGAGAAGGAACGGAACGTAATGCGA
____________________________________________________________
consensus AAACGGAAGCTTTTCAAAGATCAACAGCGGCAAAGAGAGAAGGAACGGAACGTAATGCGA
. : . : . : . : . : . :
JMFS121F04+ CAGCGTTTAGGCAGCGCTCTCATTCATCGACGATTGGCAGATACGTACGCATATCTAGAG
JMFS125A11+ CAGCGTTTAGGCAGCGCTCTCATTCATCGACGATTGGCAGATACGTACGCATATCTAGAG
JMFS008C11+ CAGCGTTTAGGCAGCGCTCTCATTCATCGACGATTGGCAGATACGTACGCATATCTAGAG
JMFS101H10+ CAGCGTTTAGGCAGCGCTCTCATTCATCGACGATTGGCAGATACGTACGCATATCTAGAG
JMFS132G03+ CAGCGTTTAGGCAGCGCTCTCATTCATCGCCGATTGGCAGATACGTACGCATATCTAGAG
JMFS088C04+ CAGCGTTTAGGCAGCGCTCTCATTCATCGACGATTGGCAGATACGTACGCATATCTAGAG
JMFS100C02+ CAGCGTTTAGGCAGCGCTCTCATTCATCGACGATTGGCAGATACGTACGCATATCTAGAG
JMFS116C07+ CAGCGTTTAGGCAGCGCTCTCATTCATCGACGATTGGCAGATACGTACGCATATCTAGAG
____________________________________________________________
consensus CAGCGTTTAGGCAGCGCTCTCATTCATCGACGATTGGCAGATACGTACGCATATCTAGAG
. : . : . : . : . : . :
JMFS121F04+ AGAGAAACCCGAGTATTCGCTTCCCATATGGATCAACTCCTCTGTTACTCCAACTTCGAC
JMFS125A11+ AGAGAAACCCGAGTATTCGCTTCCCATATGGATCAACTCCTCTGTTACTCCAACTTCGAC
JMFS008C11+ AGAGAAACCCGAGTATTCGCTTCCCATATGGATCAACTCCTCTGTTACTCCAACTTCGAC
JMFS101H10+ AGAGAAACCCGAGTATTCGCTTCCCATATGGATCAACTCCTCTGTTACTCCAACTTCGAC
JMFS132G03+ AGAGAAACCCGAGTATTCGCTTCCCATATGGATCAACTCCTCTGTTACTCCAACTTCGAC
JMFS088C04+ AGAGAAACCCGAGTATTCGCTTCCCATATGGATCAACTCCTCTGTTACTCCAACTTCGAC
JMFS100C02+ AGAGAAACCCGAGTATTCGCTTCCCATATGGATCAACTCCTCTGTTACTCCAACTTCGAC
JMFS116C07+ AGAGAAACCCGAGTATTCGCTTCCCATATGGATCAACTCCTCTGTTACTCCAACTTCGAC
____________________________________________________________
consensus AGAGAAACCCGAGTATTCGCTTCCCATATGGATCAACTCCTCTGTTACTCCAACTTCGAC
. : . : . : . : . : . :
JMFS121F04+ AACGACAGGGGAGAGAGGGAAATAGCAATAAAAAATAAATTCGAGCATGCAATATACGTA
JMFS125A11+ AACGACAGGGGAGAGAGGGAAATAGCAATAAAAAATAAATTCGAGCATGCAATATACGT
JMFS008C11+ AACGACAGGGGAGAGAGGGAAATAGCAATAAAAAATAAATTCGAGCATGCAATATACGTA
JMFS101H10+ AACGACAGGGGAGAGAGGGAAATAGCAATAAAAAATAAATTCGAGCATGCAATATACGTA
JMFS132G03+ AACGACAGGGGAGAGAGGGAAATAGCAATAAAAAATAAATTCGAGCATGCAATATACGTA
JMFS088C04+ AACGACAGGGGAGAGAGGGAAATAGCAATAAAAAATAAATTCGAGCATGCAATATACGTA
JMFS100C02+ AACGACAGGGGAGAGAGGGAAATAGCAATAAAAAATAAATTCGAGCATGCAATATACGTA
JMFS116C07+ AACGACAGGGGAGAGAGGGAAATAGCAATAAAAAATAAATTCGAGCATGCAATATACGTA
____________________________________________________________
consensus AACGACAGGGGAGAGAGGGAAATAGCAATAAAAAATAAATTCGAGCATGCAATATACGTA
. : . : . : . : . : . :
JMFS121F04+ TATCACAATGTCGA
JMFS008C11+ TATCACAATGTCGA
JMFS101H10+ TATCACAATGTCGATTATGTAAGTATAG
JMFS132G03+ TATCACAATGTCGATTATGTAAGTATAGGCGGAGAGAGAGAGAGAGA
JMFS088C04+ TATCACAATGTCGATTATGTAAGTATAGGCGGAGAGAGAGAGAGAGA
JMFS100C02+ TATCACAATGTCGATTATGTAAGTATAGGCGGAGAGAGAGAGAGAGAGAGAGAGGGAAGA
JMFS116C07+ TATCACAATGTCGATTATGTAAGTATAGGCGGAGAGAGAGAGAGAGAGAGAGAGGGAAGA
____________________________________________________________
consensus TATCACAATGTCGATTATGTAAGTATAGGCGGAGAGAGAGAGAGAGAGAGAGAGGGAAGA
. : . : . : . : . : . :
JMFS100C02+ TATAGTGAGAGAAA
JMFS116C07+ TATAGTGAGAGAAAGAGGATGGGGGTTTGTAGTGAAAGAGAGCGACAGAGAGAGGGAGTA
____________________________________________________________
consensus TATAGTGAGAGAAAGAGGATGGGGGTTTGTAGTGAAAGAGAGCGACAGAGAGAGGGAGTA
. : . : . : . : . : . :
JMFS116C07+ GAGAGCTCGGAGATGAAATGCAAATGTAAATGTAAATGCAAATTGAGATGCGTGTGGAAA
____________________________________________________________
consensus GAGAGCTCGGAGATGAAATGCAAATGTAAATGTAAATGCAAATTGAGATGCGTGTGGAAA