| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF025L15 | Sequence | 544 | 011566 (7) | ref|XP_011005940.1| | 5e-16 | PREDICTED: squamosa promoter-binding-like protein 1 isoform X2 [Populus euphrat | 814 | 007672 (5) | ref|XP_009773067.1| | 2e-77 | PREDICTED: squamosa promoter-binding-like protein 1 [Nicotiana sylvestris] |
| JMFF029M23 | Sequence | 490 | 011566 (7) | gb|EYU46873.1| | 3e-06 | hypothetical protein MIMGU_mgv1a000744mg [Erythranthe guttata] | 507 | 007672 (5) | gb|KDP28324.1| | 3e-28 | hypothetical protein JCGZ_14095 [Jatropha curcas] |
| JMFS012D07 | Sequence | 642 | 007672 (5) | ref|XP_009592086.1| | 5e-71 | PREDICTED: squamosa promoter-binding-like protein 1 isoform X1 [Nicotiana tomen | |||||
| JMFS114C03 | Sequence | 537 | 007672 (5) | gb|KDO86829.1| | 1e-23 | hypothetical protein CISIN_1g001971mg [Citrus sinensis] gb|KDO86830.1| hypotheti | |||||
| JMFS139D10 | Sequence | 637 | 007672 (5) | ref|XP_009592086.1| | 2e-92 | PREDICTED: squamosa promoter-binding-like protein 1 isoform X1 [Nicotiana tomen | |||||
This contig is upended
. : . : . : . : . : . :
JMFS012D07- TTAGAATC
____________________________________________________________
consensus TTAGAATC
. : . : . : . : . : . :
JMFS012D07- GTACTGTAATCATAACTGTGAAGCCCATTGCCGTACCTGTGTCAGAGAGATCTCAATTTA
____________________________________________________________
consensus GTACTGTAATCATAACTGTGAAGCCCATTGCCGTACCTGTGTCAGAGAGATCTCAATTTA
. : . : . : . : . : . :
JMFS012D07- CAGTTAAAGGCTTTAACTTATCTACGCCCTTGGCAAGGCTACACTGTGCATTAGAAGGGA
____________________________________________________________
consensus CAGTTAAAGGCTTTAACTTATCTACGCCCTTGGCAAGGCTACACTGTGCATTAGAAGGGA
. : . : . : . : . : . :
JMFS012D07- ACTATCTTGTTCCAGAAGCCAGTGTAGAGGAATCAGAACATAGTAATGAGCTTGAGGAGC
____________________________________________________________
consensus ACTATCTTGTTCCAGAAGCCAGTGTAGAGGAATCAGAACATAGTAATGAGCTTGAGGAGC
. : . : . : . : . : . :
JMFS012D07- ATCATGAAATCCAATCTGTAAATTTTACATGTTCTGTTCCTGAAGCAGCTGGTAGAGGCT
____________________________________________________________
consensus ATCATGAAATCCAATCTGTAAATTTTACATGTTCTGTTCCTGAAGCAGCTGGTAGAGGCT
. : . : . : . : . : . :
JMFS012D07- TCATAGAGGTCGAAGATCATGATGGTCTTAGTAGCAGTTTCTTTCCTTTTATAGTTGCTG
____________________________________________________________
consensus TCATAGAGGTCGAAGATCATGATGGTCTTAGTAGCAGTTTCTTTCCTTTTATAGTTGCTG
. : . : . : . : . : . :
JMFS012D07- AAGAGGATGTTTGCTCCGAAATTCGAACACTGGAGAATGAGATAGAGTTGAGTCAGAAAG
JMFS139D10- CTCCGAAATTCGAACACTGGAGAATGAGATAGAGTTGAGTCAGAAAG
____________________________________________________________
consensus AAGAGGATGTTTGCTCCGAAATTCGAACACTGGAGAATGAGATAGAGTTGAGTCAGAAAG
. : . : . : . : . : . :
JMFS012D07- ATTACATCAATGGACAGATTGATAAATTGGAAACAAGAAATCAAGCAATGGATTTCCTAC
JMFS139D10- ATTACATCAATGGACAGATTGATAAATTGGAAACAAGAAATCAAGCAATGGATTTCCTAC
____________________________________________________________
consensus ATTACATCAATGGACAGATTGATAAATTGGAAACAAGAAATCAAGCAATGGATTTCCTAC
. : . : . : . : . : . :
JMFS012D07- ATGAAATGGGTTGGCTTCTTCAGAGAAACAAATTGAAATCTAGAATGTCGAAATTGGATG
JMFS139D10- ATGAAATGGGTTGGCTTCTTCAGAGAAACAAATTGAAATCTAGAATGTCGAAATTGGATG
____________________________________________________________
consensus ATGAAATGGGTTGGCTTCTTCAGAGAAACAAATTGAAATCTAGAATGTCGAAATTGGATG
. : . : . : . : . : . :
JMFS012D07- CTAGTGCAAGTTGTTGCTTTCCTTCAAAACGGTTTGCATGGCTTATGGAGTTCTCTATAG
JMFS139D10- CTAGTGCAAGTTGTTGCTTTCCTTCAAAACGGTTTGCATGGCTTATGGAGTTCTCTATAG
____________________________________________________________
consensus CTAGTGCAAGTTGTTGCTTTCCTTCAAAACGGTTTGCATGGCTTATGGAGTTCTCTATAG
. : . : . : . : . : . :
JMFS012D07- ACCATAATTGGTGTGCTGTTGTGAAG-AATTGTTGGACATTTTTTTTAATGGGAGCGTGG
JMFS139D10- ACCATAATTGGTGTGCTGTTGTGAAGAAATTGTTGGACATTTTTTTTAATGGGAGCGTGG
____________________________________________________________
consensus ACCATAATTGGTGTGCTGTTGTGAAGAAATTGTTGGACATTTTTTTTAATGGGAGCGTGG
. : . : . : . : . : . :
JMFS012D07- GCACTGGAGAGCAGTCCTNCTCCTTGAAACTTTTA
JMFS139D10- GCACTGGAGAGCAGTCCTCCTCCTTGAAACTTTTATTCTCTGAGATGGGTCTCCTTCACA
____________________________________________________________
consensus GCACTGGAGAGCAGTCCTCCTCCTTGAAACTTTTATTCTCTGAGATGGGTCTCCTTCACA
. : . : . : . : . : . :
JMFS139D10- AAGCTGTTAGGAGAAATTCAAGGCCTTTGGTGGAGCTACTGTTGAGATATAGTCCAGATA
rJMFF025L15+ GGAGCTACTGTTGAGATATAGTCCAGATA
____________________________________________________________
consensus AAGCTGTTAGGAGAAATTCAAGGCCTTTGGTGGAGCTACTGTTGAGATATAGTCCAGATA
. : . : . : . : . : . :
JMFS139D10- GAGTAGCTGATGAGCTGAGGTTGGAATATGAGGAGGCTCTGGGTGGTGGGTTTTTGTTTA
rJMFF025L15+ GAGTAGCTGATGAGCTGAGGTTGGAATATGAGGAGGCTCTGGGTGGTGGGTTTTTGTTTA
____________________________________________________________
consensus GAGTAGCTGATGAGCTGAGGTTGGAATATGAGGAGGCTCTGGGTGGTGGGTTTTTGTTTA
. : . : . : . : . : . :
JMFS139D10- GACCTAATATACTAGGTCCTTCGGGTTTGACACCTCTGCATGTTGCAGCCGGTATAGATG
rJMFF025L15+ GACCTAATATACTAGGTCCTTCGGGTTTGACACCTCTGCATGTTGCAGCCGGTATAGATG
____________________________________________________________
consensus GACCTAATATACTAGGTCCTTCGGGTTTGACACCTCTGCATGTTGCAGCCGGTATAGATG
. : . : . : . : . : . :
JMFS139D10- GATCCGAAGACGTGATTGATGCATTGACTGATGATCCTGGAAAGGTGGCAATTGAAGCAT
rJMFF025L15+ GATCCGAAGACGTGATTGATGCATTGACTGATGATCCTGGAAAGGTGGCAATTGAAGCAT
____________________________________________________________
consensus GATCCGAAGACGTGATTGATGCATTGACTGATGATCCTGGAAAGGTGGCAATTGAAGCAT
. : . : . : . : . : . :
JMFS139D10- GGAAGAATGGTCGAGATAGCACAGGGTTTACTCCAGAAGACTATGCTCGT
rJMFF025L15+ GGAAGAATGGTCGAGATAGCACAGGGTTTACTCCAGAAGACTATGCTCGTCTGCGAGGAC
____________________________________________________________
consensus GGAAGAATGGTCGAGATAGCACAGGGTTTACTCCAGAAGACTATGCTCGTCTGCGAGGAC
. : . : . : . : . : . :
rJMFF029M23+ TTACATCCACNTGGTCCAGCGGAAACTCAACAGGAAAGTTTCAACGACAGAGC
rJMFF025L15+ ATTACTCTTACATCCACCTGGTCCAGCGGAAACTCAACAGGAAAGTTTCAACGACAGAGC
____________________________________________________________
consensus ATTACTCTTACATCCACCTGGTCCAGCGGAAACTCAACAGGAAAGTTTCAACGACAGAGC
. : . : . : . : . : . :
rJMFF029M23+ ACGTGGTGGTTGATATTGGTAGCGCTGTTGGGGATGGAATATACAAGTTGAAGCAAAATG
rJMFF025L15+ ACGTGGTGGTTGATATTGGTAGCGCTGTTGGGGATGGAATATACAAGTTGAAGCAAAATG
JMFS114C03+ TGGTGGTTGATATTGGTAGCGCTGTTGGGGATGGAATATACAAGTTGAAGCAAAATG
____________________________________________________________
consensus ACGTGGTGGTTGATATTGGTAGCGCTGTTGGGGATGGAATATACAAGTTGAAGCAAAATG
. : . : . : . : . : . :
rJMFF029M23+ ATGGTGGTAGCACGAGCTTCGAGGTTTCAAGATTATCCAGATCCAGAGAGGAGGGTTGCA
rJMFF025L15+ ATGGTGGTAGCACGAGCTTCGAGGTTTCAAGATTATCCAGATCCAGAGAGGAGGGTTGCA
JMFS114C03+ ATGGTGGTAGCACGAGCTTCGAGGTTTTAAGATTATCCAGATCCAGAGAGGAGGGTTGCA
____________________________________________________________
consensus ATGGTGGTAGCACGAGCTTCGAGGTTTCAAGATTATCCAGATCCAGAGAGGAGGGTTGCA
. : . : . : . : . : . :
rJMFF029M23+ GGGTGTGCAATCAGAAGATGGGTTATGTAATCAGGGGGCGATCGCTACTTTACAAGCCGG
rJMFF025L15+ GGGTGTGCAATCAGAAGAAGGGTTATGTAATCAGGGGGCGATCGCTACTTTACAAGCCGG
JMFS114C03+ GGGTGTGCAATCAGAAGATGGGTTATGTAATCAGGGGGCGATCGCTACTTTACAAGCCGG
____________________________________________________________
consensus GGGTGTGCAATCAGAAGATGGGTTATGTAATCAGGGGGCGATCGCTACTTTACAAGCCGG
. : . : . : . : . : . :
rJMFF029M23+ CTATGCTGTCAATGGTGGCAATAGCTGCTGTTTGTGTTTGTGTTGCTCTTNTATTCAAGA
rJMFF025L15+ CTATGCTGTCAATGGTGGCAATAGCTGCTGTTTGTGTTTGTGTTGCTCTTCTATTCAAGA
JMFS114C03+ CTATGCTGTCAATGGTGGCAATAGCTGCTGTTTGTGTTTGTGTTGCTCTTCTATTCAAGA
____________________________________________________________
consensus CTATGCTGTCAATGGTGGCAATAGCTGCTGTTTGTGTTTGTGTTGCTCTTCTATTCAAGA
. : . : . : . : . : . :
rJMFF029M23+ GCTCACCGGAAGTCCTTTACGTGTTCCAACCGTTTAGGTGGGAAATGTTGGANTACGGTT
rJMFF025L15+ GCTCACCGGAAGTCCTTTACGTGTTCCAACCGTTTAGGTGGGAAATGTTGGACTACGGTT
JMFS114C03+ GCTCACCGGAAGTCCTTTACGTGTTCCAACCGTTTAGGTGGGAAATGTTGGACTACGGTT
____________________________________________________________
consensus GCTCACCGGAAGTCCTTTACGTGTTCCAACCGTTTAGGTGGGAAATGTTGGACTACGGTT
. : . : . : . : . : . :
rJMFF029M23+ NTAGNTAAGNTAAGNTAATTAAGGTTGCCGGTCGGGGNTAATGTAGTATGCTTCGTCGGT
rJMFF025L15+ CTAGCTAAGCTAAGCTAATTAAGGTTGCCGGTCGGGGCTAATGTAGTATGCTTCGTCGGT
JMFS114C03+ CTAGCTAAGCTAAGCTAATTAAGGTTGCCGGTCGGGGCTAATGTAGTATGCTTCGTCGGT
____________________________________________________________
consensus CTAGCTAAGCTAAGCTAATTAAGGTTGCCGGTCGGGGCTAATGTAGTATGCTTCGTCGGT
. : . : . : . : . : . :
rJMFF029M23+ CCTTAATTNGTATCTATATGTATGCATGCGTNAATAAACACTGTATAATNTTNATCCACC
rJMFF025L15+ CCTTAATTTGTATCTATATGTATGCATGCGTGAATAAACACTGTATAATTTTTATCCACC
JMFS114C03+ CCTTAATTTGTATCTATATGTATGCATGCGTGAATAAACCCTGTATAATTTTTATCCACC
____________________________________________________________
consensus CCTTAATTTGTATCTATATGTATGCATGCGTGAATAAACACTGTATAATTTTTATCCACC
. : . : . : . : . : . :
rJMFF029M23+ AGGATCGAGTCCTTTCAGATATATATACATAATA
rJMFF025L15+ AGGATCGAGTCCTTTCAGATATATATACATAATATTTATGTTGTACTATATATATATACG
JMFS114C03+ AGGATCGAGTCCTTTCAGATATATATACATAATATTTATGTTGTACTATATATATATACG
____________________________________________________________
consensus AGGATCGAGTCCTTTCAGATATATATACATAATATTTATGTTGTACTATATATATATACG
. : . : . : . : . : . :
rJMFF025L15+ ACGCC
JMFS114C03+ ACGCCATTTTTGGGGACTCCAAGTAAAAAAAAAAAAAAAAAAACTCGAGACTAGTTCTCT
____________________________________________________________
consensus ACGCCATTTTTGGGGACTCCAAGTAAAAAAAAAAAAAAAAAAACTCGAGACTAGTTCTCT