Contig 007670:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF014B23Sequence729007670 (6)ref|XP_006343321.1|143PREDICTED: uncharacterized protein LOC102600442 [Solanum tuberosum]
JMFS111D09Sequence626007670 (6)ref|XP_006343321.1|105PREDICTED: uncharacterized protein LOC102600442 [Solanum tuberosum]
JMSF007D07Sequence275009202 (4)750007670 (6)ref|XP_006343321.1|213PREDICTED: uncharacterized protein LOC102600442 [Solanum tuberosum]
JMSF017D23Sequence227009202 (4)744007670 (6)ref|XP_006343321.1|172PREDICTED: uncharacterized protein LOC102600442 [Solanum tuberosum]
JMSF019G20Sequence260009202 (4)760007670 (6)ref|XP_006343321.1|188PREDICTED: uncharacterized protein LOC102600442 [Solanum tuberosum]
JMSF045E13Sequence793009202 (4)ref|XP_009589981.1|53.1PREDICTED: uncharacterized protein LOC104087273 [Nicotiana tomentosiformis]816007670 (6)ref|XP_006343321.1|213PREDICTED: uncharacterized protein LOC102600442 [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF007D07+ TATCTGTCGATGGAGATTCACAGGGTGTTGAGCGACTCCCAGGGGCAC
rJMSF045E13+ ATCTGTCGATGGAGATTCACAGGGTGTTGAGCGACTCCAAGGGGCAC
                      ____________________________________________________________
consensus TATCTGTCGATGGAGATTCACAGGGTGTTGAGCGACTCCCAGGGGCAC
 
. : . : . : . : . : . :
rJMSF007D07+ TGTCAGCTTATATGTGGCCTGGAATGGTACTTAAGTCTGGTGATAAAATAAATGAACCTT
rJMSF017D23+ CTGGAATGGTACTTAAGTCTGGTGATAAAATAAATGAACCTT
rJMSF019G20+ TCAGCTTATATGTGGCCTGGAATGGTACTTAAGTCTGGTGATAAAATAAATGAACCTT
rJMSF045E13+ TGTCAGCTTATATGTGGCCTGGAATGGTACTTAAGTCTGGTGATAAAATAAATGAACCTT
                      ____________________________________________________________
consensus TGTCAGCTTATATGTGGCCTGGAATGGTACTTAAGTCTGGTGATAAAATAAATGAACCTT
 
. : . : . : . : . : . :
rJMSF007D07+ CATTGCCTCAAGAGCAAGATGTGTCAGATGAAGAATCCGAATACGAACTTGAATATGAAA
rJMSF017D23+ CATTGCCTCAAGAGCAAGATGTGTCAGATGAAGAATCCGAATACGAACTNGAATATGAAA
rJMSF019G20+ CATTGCCTCAAGAGCAAGATGTGTCAGATGAAGAATCCGAATACGAACTTGAATATGAAA
rJMSF045E13+ CATTGCCTCAAGAGCAAGATGTGTCAGATGAAGAATCCGAATACGAACTTGAATATGAAA
rJMFF014B23+ CTCAAGAGCAAGATGTGTCAGATGAAGAATCCGAATACGANCTTGAATATGAAA
                      ____________________________________________________________
consensus CATTGCCTCAAGAGCAAGATGTGTCAGATGAAGAATCCGAATACGAACTTGAATATGAAA
 
. : . : . : . : . : . :
rJMSF007D07+ TCCTATCTGCTGGTTCAGCAGAGCCCTGGGATGATGCAGATGGAGGCTGGATATCTGCAG
rJMSF017D23+ TCCTATCTGCTGGTTCAGCAGAGCCCTGGGATGATGCAGATGGAGGCTGGATATCTGCAG
rJMSF019G20+ TCCTATCTGCTGGTTCAGCAGAGCCCTGGGATGATGCAGATGGAGGCTGGATATCTGCAG
rJMSF045E13+ TCCTATCTGCTGGTTCAGCAGAGCCCTGGGATGATGCAGATGGAGGCTGGATATCTGCAG
rJMFF014B23+ TCCTATCTGCTGGTTCAGCAGAGCCNTGGGATGATGCAGATGGAGGCTGGATATCTGCAG
                      ____________________________________________________________
consensus TCCTATCTGCTGGTTCAGCAGAGCCCTGGGATGATGCAGATGGAGGCTGGATATCTGCAG
 
. : . : . : . : . : . :
rJMSF007D07+ ATGGTCCTGTTACAACAACAGGGACAGCAGAATCAAGCAAACGGAAAGAGAATGGTTCTG
rJMSF017D23+ ATGGTCCTGTTACAACAACAGGGACAGCAGAATCAAGCAAACGGAAAGAGAATGGTTCTG
rJMSF019G20+ ATGGTCCTGTTACAACAACAGGGACAGCAGAATCAAGCAAACGGAAAGAGAATGGTTCTG
rJMSF045E13+ ATGGTCCTGTTACAACAACAGGGACAGCAGAATCAAGCAAACGGAAAGAGAATGGTTCTG
rJMFF014B23+ ATGGTCCTGTTACAACAACAGGGACAGCAGAATCAAGCAAACGGAAAGAGAATGGTTCTG
JMFS111D09+ CAAGCAAACGGAAAGAGAATGG-TCTG
                      ____________________________________________________________
consensus ATGGTCCTGTTACAACAACAGGGACAGCAGAATCAAGCAAACGGAAAGAGAATGGTTCTG
 
. : . : . : . : . : . :
rJMSF007D07+ AAGGAGAGGTGGGGCCTTCAACATTGGAATCTCAGCTGCCGGGAGTGATTGAAAAGGAAG
rJMSF017D23+ AAGGAGAGGTGGGGCCTTCAACATTGGAATCTCAGCTGCCGGGAGTGATTGAAAAGGAAG
rJMSF019G20+ AAGGAGAGGTGGGGCCTTCAACATTGGAATCTCAGCTGCCGGGAGTGATTGAAAAGGAAG
rJMSF045E13+ AAGGAGAGGTGGGGCCTTCAACATTGGAATCTCAGCTGCCGGGAGTGATTGAAAAGGAAG
rJMFF014B23+ AAGGAGAGGTGGGGCCTTCAACATTGGAATCTCAGCTGCCGGGAGTGATTGAAAAGGAAG
JMFS111D09+ AAGGAGAGGTGGGGCCTTCAACATTGGAATCTCAGCTGCCGGGAGTGATTGAAAAGGAAG
                      ____________________________________________________________
consensus AAGGAGAGGTGGGGCCTTCAACATTGGAATCTCAGCTGCCGGGAGTGATTGAAAAGGAAG
 
. : . : . : . : . : . :
rJMSF007D07+ AAATACCAGGAAAAGATGAAGCTGACAGAGTATCCGAGGCTGATAAGGGCACAACATACA
rJMSF017D23+ AAATACCAGGAAAAGATGAAGCTGACAGAGTATCCGAGGCTGATAAGGGCACAACATACA
rJMSF019G20+ AAATACCAGGAAAAGATGAAGCTGACAGAGTATCCGAGGCTGATAAGGGCACAACATACA
rJMSF045E13+ AAATACCAGGAAAAGATGAAGCTGACAGAGTATCCGAGGCTGATAAGGGCACAACATACA
rJMFF014B23+ AAATACCAGGAAAAGATGAAGCTGACAGAGTATCCGAGGCTGATAAGGGCACAACATACA
JMFS111D09+ AAATACCAGGAAAAGATGAAGCTGACAGAGTATCCGAGGCTGATAAGGGCACAACATACA
                      ____________________________________________________________
consensus AAATACCAGGAAAAGATGAAGCTGACAGAGTATCCGAGGCTGATAAGGGCACAACATACA
 
. : . : . : . : . : . :
rJMSF007D07+ ATTTTGAGGATTTGGAGCACTTAATGGCTGAGATTGGAAATGTGCGTGATAGCTTAAGAT
rJMSF017D23+ ATTTTGAGGATTTGGAGCACTTAATGGCTGAGATTGGAAATGTGCGTGATAGCTTAAGAT
rJMSF019G20+ ATTTTGAGGATTTGGAGCACTTAATGGCTGAGATTGGAAATGTGCGTGATAGCTTAAGAT
rJMSF045E13+ ATTTTGAGGATTTGGAGCACTTAATGGCTGAGATTGGAAATGTGCGTGATAGCTTAAGAT
rJMFF014B23+ ATTTTGAGGATTTGGAGCACTTAATGGCTGAGATTGGAAATGTGCGTGATAGCTTAAGAT
JMFS111D09+ ATTTTGAGGATTTGGAGCACTTAATGGCTGAGATTGGAAATGTGCGTGATAGCTTAAGAT
                      ____________________________________________________________
consensus ATTTTGAGGATTTGGAGCACTTAATGGCTGAGATTGGAAATGTGCGTGATAGCTTAAGAT
 
. : . : . : . : . : . :
rJMSF007D07+ TGATGCCAGATTTTCAAAGGAGGGAAATGGCAGCCAATCTGGCCATGAAAATGGCAGCCA
rJMSF017D23+ TGATGCCAGATTTTCAAAGGAGGGAAATGGCAGCCAATCTGGCCATGAAAATGGCAGCCA
rJMSF019G20+ TGATGCCAGATTTTCAAAGGAGGGAAATGGCAGCCAATCTGGCCATGAAAATGGCAGCCA
rJMSF045E13+ TGATGCCAGATTTTCAAAGGAGGGAAATGGCAGCCAATCTGGCCATGAAAATGGCAGCCA
rJMFF014B23+ TGATGCCAGATTTTCAAAGGAGGGAAATGGCAGCCAATCTGGCCATGAAAATGGCAGCCA
JMFS111D09+ TGATGCCAGATTTTCAAAGGAGGGAAATGGCAGCCAATCTGGCCATGAAAATGGCAGCCA
                      ____________________________________________________________
consensus TGATGCCAGATTTTCAAAGGAGGGAAATGGCAGCCAATCTGGCCATGAAAATGGCAGCCA
 
. : . : . : . : . : . :
rJMSF007D07+ TGTTTGGTGATAGCAGTGGAGATGAAGAAGGGTTAGATTGATACGAGAGGACTTTTGAAG
rJMSF017D23+ TGTTTGGTGATAGCAGTGGAGATGAAGAAGGGTTAGATTGATACGAGAGGACTTTTGAAG
rJMSF019G20+ TGTTTGGTGATAGCAGTGGAGATGAAGAAGGGTTAGATTGATACGAGAGGACTTTTGAAG
rJMSF045E13+ TGTTTGGTGATAGCAGTGGAGATGAAGAAGGGTTAGATTGATACGAGAGGACTTTTGAAG
rJMFF014B23+ TGTTTGGTGATAGCAGTGGAGATGAAGAAGGGTTAGATNGATACGAGAGGACTTTTGAAG
JMFS111D09+ TGTTTGGTGATAGCAGTGGAGATGAAGAAGGGTTAGATTGATACGAGAGGACTTTTGAAG
                      ____________________________________________________________
consensus TGTTTGGTGATAGCAGTGGAGATGAAGAAGGGTTAGATTGATACGAGAGGACTTTTGAAG
 
. : . : . : . : . : . :
rJMSF007D07+ TGTTCTGTACCGTTGATGCCTGTTAGCAACCAAAATCTATTACAGATGTTTATCAACTAT
rJMSF017D23+ TGTTCTGTACCGTTGATGCCTGTTAGCAACCAAAATCTATTACAGATGTTTATCAACTAT
rJMSF019G20+ TGTTCTGTACCGTTGATGCCTGTTAGCAACCAAAATCTATTACAGATGTTTATCAACTAT
rJMSF045E13+ TGTTCTGTACCGTTGATGCCTGTTAGCAACCAAAATCTATTACAGATGTTTATCAACTAT
rJMFF014B23+ TGTTCTGTACCGTTGATGCCTGTTAGCAACCAAAATCTATTACAGATGTTTATCAACTAT
JMFS111D09+ TGTTCTGTACCGTTGATGCCTGTTAGCAACCAAAATCTATTACAGATGTTTATCAACTAT
                      ____________________________________________________________
consensus TGTTCTGTACCGTTGATGCCTGTTAGCAACCAAAATCTATTACAGATGTTTATCAACTAT
 
. : . : . : . : . : . :
rJMSF007D07+ TGAAAACATGTTCACCTATTTTGTACAAACAAAGTGAAACCTATGACTCCTGCTAATCTC
rJMSF017D23+ TGAAAACATGTTCACCTATTTTGTACAAACAAAGTGAAACCTATGACTCCTGCTAATCTC
rJMSF019G20+ TGAAAACATGTTCACCTATTTTGTACAAACAAAGTGAAACCTATGACTCCTGCTAATCTC
rJMSF045E13+ TGAAAACATGTTCACCTATTTTGTACAAACAAAGTGAAACCTATGACTCCTGCTAATCTC
rJMFF014B23+ TGAAAACATGTTCACCTATTTTGTACAAACAAAGTGAAACCTATGACTCCTGCTAATCTC
JMFS111D09+ TGAAAACATGTTCACCTATTTTGTACAAACAAAGTGAAACCTATGACTCCTGCTAATCTC
                      ____________________________________________________________
consensus TGAAAACATGTTCACCTATTTTGTACAAACAAAGTGAAACCTATGACTCCTGCTAATCTC
 
. : . : . : . : . : . :
rJMSF007D07+ CTCTTGTCCCATGAAAGGTCTACGCAGGATGAACAAAGGTAC
rJMSF017D23+ CTCTTGTCCCATGAAAGGTCTACGCAGGATGAACAAAGGTACNCCGTACACCTCTCCACT
rJMSF019G20+ CTCTTGTCCCATGAAAGGTCTACGCAGGATGAACAAAGGTACACCGTACACCTCTCCACT
rJMSF045E13+ CTCTTGTCCCATGAAAGGTCTACGCAGGATGAACAAAGGTACACCGTACACCTCTCCACT
rJMFF014B23+ CTCTTGTCCCATGAAAGGTCTACGCAGGATGAACAAAGGTACACCGTACACCTCTCCACT
JMFS111D09+ CTCTTGTCCCATGAAAGGTCTACGCAGGATGAACAAAGGTACACCGTACACCTCTCCACT
                      ____________________________________________________________
consensus CTCTTGTCCCATGAAAGGTCTACGCAGGATGAACAAAGGTACACCGTACACCTCTCCACT
 
. : . : . : . : . : . :
rJMSF017D23+ CAAGTGGGTTAGTTTAATTACATAAAACTT
rJMSF019G20+ CAAGTGGGTTAGTTTAATTACATAAAACTTTTAC
rJMSF045E13+ CAAGTGGGTTAGTTTAATTACATAAAACTTTTAC
rJMFF014B23+ CAAGTGGGTTAGTTTAATTACATAAAACTTTTACATGAATATTTTCTCTCTGGCTTTTTA
JMFS111D09+ CAAGTGGGTTAGTTTAATTACATAAAACTTTTACATGAATATTTTCTCTCTGGCTTTTTA
                      ____________________________________________________________
consensus CAAGTGGGTTAGTTTAATTACATAAAACTTTTACATGAATATTTTCTCTCTGGCTTTTTA
 
. : . : . : . : . : . :
rJMFF014B23+ TTTAATCAAAACTCA
JMFS111D09+ TTTAATCAAAACTCATATTCTAGCTCAAAAAAAAAAAAAAAAAACTCGAAACTAGTTCTC
                      ____________________________________________________________
consensus TTTAATCAAAACTCATATTCTAGCTCAAAAAAAAAAAAAAAAAACTCGAAACTAGTTCTC