Contig 007668:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS107G08+                                                                  CAGGA
                      ____________________________________________________________
consensus                                                                    CAGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS107G08+           CAGATATCGGTTCTTCTGGAAGTTTCAGCGTGTCTGAGTTAGAATTACTGGGTAACGAAG
JMFS110D04+                                          GTCTGAGTTAGAATTACTGGGTAACGAAG
                      ____________________________________________________________
consensus             CAGATATCGGTTCTTCTGGAAGTTTCAGCGTGTCTGAGTTAGAATTACTGGGTAACGAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS107G08+           GTGAGGCATCTTGTATAATTGCAGGGTCTTGGGTATGAGCAGCGGGGAGAGAACCGGAAT
JMFS110D04+           GTGAGGCATCTTGTATAATTGCAGGGTCTTGGGTATGAGCAGCGGGGAGAGAACCGGAAT
                      ____________________________________________________________
consensus             GTGAGGCATCTTGTATAATTGCAGGGTCTTGGGTATGAGCAGCGGGGAGAGAACCGGAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS107G08+           CACTTGGCTTTGCATCTAAGACGGATAAAGGAAGGGATTCTGGGAGAGCCGTAGAATTTT
JMFS110D04+           CACTTGGCTTTGCATCTAAGACGGATAAAGGAAGGGATTCTGGGAGAGCCGTAGAATTTT
                      ____________________________________________________________
consensus             CACTTGGCTTTGCATCTAAGACGGATAAAGGAAGGGATTCTGGGAGAGCCGTAGAATTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS107G08+           CATCTCTGCGACGCTCCAATGGTTCTGGATTCTCTGGTAGTGGAAGTAATGCTTCCAGTT
JMFS110D04+           CATCTCTGCGACGCTCCAATGGTTCTGGATTCTCTGGTAGTGGAAGTAATGCTTCCAGTT
                      ____________________________________________________________
consensus             CATCTCTGCGACGCTCCAATGGTTCTGGATTCTCTGGTAGTGGAAGTAATGCTTCCAGTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS107G08+           GGGGAGATTCAGTTTCAAATGTTATAATACCCGTTTCGCTTTCATTGACCGGAGAAGAAG
JMFS110D04+           GGGGAGATTCAGTTTCAAATGTTATAATACCCGTTTCGCTTTCATTGACCGGAGAAGAAG
                      ____________________________________________________________
consensus             GGGGAGATTCAGTTTCAAATGTTATAATACCCGTTTCGCTTTCATTGACCGGAGAAGAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS107G08+           TTGAAATAATCAAATTTCCCGATGGAGAAGGTTGATCCTCTTCCAGGTATCCACCGCCAT
JMFS110D04+           TTGAAATAATCAAATTTCCCGATGGAGAAGGTTGATCCTCTTCCAGGTATCCACCGCCAT
                      ____________________________________________________________
consensus             TTGAAATAATCAAATTTCCCGATGGAGAAGGTTGATCCTCTTCCAGGTATCCACCGCCAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS107G08+           CATCATGCTCGGCTTTACAACTATCTGAAGCCTGCATTTCATGGCTCATTTTTCCATCGA
JMFS110D04+           CATCATGCTCGGCTTTACAACTATCTGAAGCCTGCATTTCATGGCTCATTTTTCCATCGA
                      ____________________________________________________________
consensus             CATCATGCTCGGCTTTACAACTATCTGAAGCCTGCATTTCATGGCTCATTTTTCCATCGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS107G08+           TGTTTTCGCTCGTCTCAGATGCTGCACCGTTTGCCCGATCCTCGTTCAGTATAGAAGCCT
JMFS110D04+           TGTTTTCGCTCGTCTCAGATGCTGCACCGTTTGCCCGATCCTCGTTCAGTATAGAAGCCT
                      ____________________________________________________________
consensus             TGTTTTCGCTCGTCTCAGATGCTGCACCGTTTGCCCGATCCTCGTTCAGTATAGAAGCCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS107G08+           CAGATACAATAGAGCATTCTGACGGACCATTTTCCTTCATACTTTTCACATCCTCCATTC
JMFS110D04+           CAGATACAATAGAGCATTCTGACGGACCATTTTCCTTCATACTTTTCACATCCTCCATTC
                      ____________________________________________________________
consensus             CAGATACAATAGAGCATTCTGACGGACCATTTTCCTTCATACTTTTCACATCCTCCATTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS107G08+           AAGAAACAGCTAAGGTGAACCAAGTTGTGACGAGAATCCAGGAATCAGTGGAAGCACCAC
JMFS110D04+           AAGAAACAGCTAAGGTGAACCAAGTTGTGACGAGAATCCAGGAATCAGTGGAAGCACCAC
                      ____________________________________________________________
consensus             AAGAAACAGCTAAGGTGAACCAAGTTGTGACGAGAATCCAGGAATCAGTGGAAGCACCAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS107G08+           AGAGAAGTCAAAA                                               
JMFS110D04+           AGAGAAGTCAAAATTCTGACGCTGCAAATGAATCCGCCTCTGTGTCTGGGTGTCTCTGAC
                      ____________________________________________________________
consensus             AGAGAAGTCAAAATTCTGACGCTGCAAATGAATCCGCCTCTGTGTCTGGGTGTCTCTGAC