Contig 007659:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS104E12Sequence627007659 (2)
JMSF051H08Sequence630007659 (2)628005746 (2)ref|XP_011096599.1|6e-12PREDICTED: transcription factor TCP2-like [Sesamum indicum] ref|XP_011096600.1|

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF051H08+ CTCCATCTCCATACCACTTTCATACCTTTCTCAAAACCTCTCTTT
                      ____________________________________________________________
consensus CTCCATCTCCATACCACTTTCATACCTTTCTCAAAACCTCTCTTT
 
. : . : . : . : . : . :
JMSF051H08+ AATTACTAGTGTGATATTACACTTTGTACCCTGGGTTTCAAGAATCCAAACTAGGGCTCA
                      ____________________________________________________________
consensus AATTACTAGTGTGATATTACACTTTGTACCCTGGGTTTCAAGAATCCAAACTAGGGCTCA
 
. : . : . : . : . : . :
JMSF051H08+ GCTACACAGAGATACAGAGAGAGAGAGAAACAAAAAAAAACTGTGGGTAAGGTAGTGGGG
                      ____________________________________________________________
consensus GCTACACAGAGATACAGAGAGAGAGAGAAACAAAAAAAAACTGTGGGTAAGGTAGTGGGG
 
. : . : . : . : . : . :
JMSF051H08+ GTGGGAAGGGGGTGTGGAGTGTTTATAGATGTGGGTTTTGGGTGTCCTTTGCATTGATGA
                      ____________________________________________________________
consensus GTGGGAAGGGGGTGTGGAGTGTTTATAGATGTGGGTTTTGGGTGTCCTTTGCATTGATGA
 
. : . : . : . : . : . :
JMSF051H08+ TGATTACGCAACGCAGGTAGAGTAGTACTTTGGTTTGTGGTGTATACATACAAAACCCCA
                      ____________________________________________________________
consensus TGATTACGCAACGCAGGTAGAGTAGTACTTTGGTTTGTGGTGTATACATACAAAACCCCA
 
. : . : . : . : . : . :
JMSF051H08+ TATACGTATAGGTGAAAAAGGAGTACTTTTGTTTTGTGGGATTGATTGATTGGATTGATA
JMFS104E12+ TTGTGGGATTGATTGATTGGATTGATA
                      ____________________________________________________________
consensus TATACGTATAGGTGAAAAAGGAGTACTTTTGTTTTGTGGGATTGATTGATTGGATTGATA
 
. : . : . : . : . : . :
JMSF051H08+ TATCACGTTCAGGACCCGTTGAAATGTCAGAACACAAGAGAGGAGAGAAGACGAGAAAGA
JMFS104E12+ TATCACGTTCAGGACCCGTTGAAATGTCAGAACACAAGAGAGGAGAGAAGNCGAGAAAGA
                      ____________________________________________________________
consensus TATCACGTTCAGGACCCGTTGAAATGTCAGAACACAAGAGAGGAGAGAAGACGAGAAAGA
 
. : . : . : . : . : . :
JMSF051H08+ AAGAAAGAAAGAAAGAAAGGCAAAAGCTTTTCTCTTTCCTGGCGACACTGCTTTCAAAAC
JMFS104E12+ AAGAAAGAAAGAAAGAAAGGCAAAAGCTTTTCTCTTTCCTGGCGACACTGCTTTCAAAAC
                      ____________________________________________________________
consensus AAGAAAGAAAGAAAGAAAGGCAAAAGCTTTTCTCTTTCCTGGCGACACTGCTTTCAAAAC
 
. : . : . : . : . : . :
JMSF051H08+ CTCTCTGAAACTCTTTTATTACGAGCTCCTCTTCCTCATCCTCTTTTCTCTTTTAGCTTC
JMFS104E12+ CTCTCTGAAACTCTTTTATTACGAGCTCCTCTTCCTCATCCTCTTTTCTCTTTTAGCTTC
                      ____________________________________________________________
consensus CTCTCTGAAACTCTTTTATTACGAGCTCCTCTTCCTCATCCTCTTTTCTCTTTTAGCTTC
 
. : . : . : . : . : . :
JMSF051H08+ CATAGAAATTGCAGGCCACCTTTGATCTGAAGCTTTGAGATTTAATTAAGCTTTTGGGGT
JMFS104E12+ CATAGAAATTGCAGGCCACCTTTGATCTGAAGCTTTGAGATTTAATTAAGCTTTTGGGGT
                      ____________________________________________________________
consensus CATAGAAATTGCAGGCCACCTTTGATCTGAAGCTTTGAGATTTAATTAAGCTTTTGGGGT
 
. : . : . : . : . : . :
JMSF051H08+ GGGTGGGTGGGCGGGCTGAAGAGAAAAGCTAAGCGGCATGGCTT
JMFS104E12+ GGGTGGGTGGGCGGGCTGAAGAGAAAAGCTAAGCGGCATGGCTTGATCTCGTCGTTTTAG
                      ____________________________________________________________
consensus GGGTGGGTGGGCGGGCTGAAGAGAAAAGCTAAGCGGCATGGCTTGATCTCGTCGTTTTAG
 
. : . : . : . : . : . :
JMFS104E12+ TTAGATGACAAAAGTCAAATCCTTAACTGTTCGATCTGTGATTTCTCCCCTCCCATCAAC
                      ____________________________________________________________
consensus TTAGATGACAAAAGTCAAATCCTTAACTGTTCGATCTGTGATTTCTCCCCTCCCATCAAC
 
. : . : . : . : . : . :
JMFS104E12+ TCAAACCTTGTCCGGATCAGCTCCCGAAATTCCGGCAATGTTGTTGCTTCCTTATCTTAG
                      ____________________________________________________________
consensus TCAAACCTTGTCCGGATCAGCTCCCGAAATTCCGGCAATGTTGTTGCTTCCTTATCTTAG
 
. : . : . : . : . : . :
JMFS104E12+ TACTTTGCCAACTCCGACGATACTCTCTCAGTGACTCACTACCATGTCCGGCAGCTTAAA
                      ____________________________________________________________
consensus TACTTTGCCAACTCCGACGATACTCTCTCAGTGACTCACTACCATGTCCGGCAGCTTAAA
 
. : . : . : . : . : . :
JMFS104E12+ TTCAAAAGGCCCAACCACAACAAACAAAACAAGAATGAAACAATTTTAATGGAGCTGTAA
                      ____________________________________________________________
consensus TTCAAAAGGCCCAACCACAACAAACAAAACAAGAATGAAACAATTTTAATGGAGCTGTAA
 
. : . : . : . : . : . :
JMFS104E12+ AGCCAAGAATTCAGGTGAATTTTCTTGAAAACTTGTTTAAAATTCTAAAGAGAGAAAGGA
                      ____________________________________________________________
consensus AGCCAAGAATTCAGGTGAATTTTCTTGAAAACTTGTTTAAAATTCTAAAGAGAGAAAGGA