Contig 007654:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS102B10Sequence615007654 (3)ref|XP_009614965.1|6e-21PREDICTED: putative late blight resistance protein homolog R1B-14 [Nicotiana to
JMFS132C09Sequence620007654 (3)ref|XP_006362574.1|4e-28PREDICTED: putative late blight resistance protein homolog R1B-12-like [Solanum
JMFS162F07Sequence592007654 (3)ref|XP_009614965.1|1e-26PREDICTED: putative late blight resistance protein homolog R1B-14 [Nicotiana to

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS132C09+ AGACGAT
                      ____________________________________________________________
consensus AGACGAT
 
. : . : . : . : . : . :
JMFS162F07+ TTCATTATCAAAACCAACCACGTCTTCTTCTTCAACCACGGGGG
JMFS132C09+ CTTTTATAATTTNTGCTTCATTATCAAAACCAACCACGTCTTCTTCTTCAACCACGGGGG
JMFS102B10+ CTTCAACCACGGGGG
                      ____________________________________________________________
consensus CTTTTATAATTTNTGCTTCATTATCAAAACCAACCACGTCTTCTTCTTCAACCACGGGGG
 
. : . : . : . : . : . :
JMFS162F07+ CCATCCTCTGCAGAATTGGTTGGCCTCTGTTGGGTTCATCTATGAGGGCCTGAAGAACTG
JMFS132C09+ CCATCCTCTGCAGAATTGGTTGGCCTCTGTTGGGTTCATCTATGAGGGCCTGAAGAACTG
JMFS102B10+ CCATCCTCTGCAGAATTGGTTGGCCTCTGTTGGGTTCATCTATGAGGGCCTGAAGAACTG
                      ____________________________________________________________
consensus CCATCCTCTGCAGAATTGGTTGGCCTCTGTTGGGTTCATCTATGAGGGCCTGAAGAACTG
 
. : . : . : . : . : . :
JMFS162F07+ GGGAGTGATCTTGCCTGATTTTCCTAACCCTTTCTCTGATGCTCTGAATCTCCCTCGCGG
JMFS132C09+ GGGAGTGATCTTGCCTGATTTTCCTAACCCTTTCTCTGATGCTCTGAATCTCCCTCGCGG
JMFS102B10+ GGGAGTGATCTTGCCTGATTTTCCTAACCCTTTCTCTGATGCTCTGAATCTCCCTCGCGG
                      ____________________________________________________________
consensus GGGAGTGATCTTGCCTGATTTTCCTAACCCTTTCTCTGATGCTCTGAATCTCCCTCGCGG
 
. : . : . : . : . : . :
JMFS162F07+ ATTCGTTAACCTTGGCGTAATAAGCCAGTATTTGCAGGTATTTCATCAGCCCTCTGTTAT
JMFS132C09+ ATTCGTTAACCTTGGCGTAATAAGCCAGTATTTGCAGGTATTTCATCAGCCCTCTGTTAT
JMFS102B10+ ATTCGTTAACCTTGGCGTAATAAGCCAGTATTTGCAGGTATTTCATCAGCCCTCTGTTAT
                      ____________________________________________________________
consensus ATTCGTTAACCTTGGCGTAATAAGCCAGTATTTGCAGGTATTTCATCAGCCCTCTGTTAT
 
. : . : . : . : . : . :
JMFS162F07+ TATACTTCTTCGTCTCCACAGTGTACTTAAGGATGGCATCCTCGGCATCAGTAACAACGT
JMFS132C09+ TATACTTCTTCGTCTCCACAGTGTACTTAAGGATGGCATCCTCGGCATCAGTAACAACGT
JMFS102B10+ TATACTTCTTCGTCTCCACAGTGTACTTAAGGATGGCATCCTCGGCATCAGTAACAACGT
                      ____________________________________________________________
consensus TATACTTCTTCGTCTCCACAGTGTACTTAAGGATGGCATCCTCGGCATCAGTAACAACGT
 
. : . : . : . : . : . :
JMFS162F07+ TTCGGATCTTGTCCACCACGTCTTGCAGGACGAAGTTGTCGCGGGCTCGCTGGTTCATCG
JMFS132C09+ TTCGGATCTTGTCCACCACGTCTTGCAGGACGAAGTTGTCGCGGGCTCGCTGGTTCATCG
JMFS102B10+ TTCGGATCTTGTCCACCACGTCTTGCAGGACGAAGTTGTCGCGGGCTCGCTGGTTCATCG
                      ____________________________________________________________
consensus TTCGGATCTTGTCCACCACGTCTTGCAGGACGAAGTTGTCGCGGGCTCGCTGGTTCATCG
 
. : . : . : . : . : . :
JMFS162F07+ ACGCCTGCATGAGATAGGCGTTGAAGGATTCCAGGTCGGCCACCAAGTCGTCGGTCTGGT
JMFS132C09+ ACGCCTGCATGAGATAGGCGTTGAAGGATTCCAGGTCGGCCACCAAGTCGTCGGTCTGGT
JMFS102B10+ ACGCCTGCATGAGATAGGCGTTGAAGGATTCCAGGTCGGCCACCAAGTCGTCGGTCTGGT
                      ____________________________________________________________
consensus ACGCCTGCATGAGATAGGCGTTGAAGGATTCCAGGTCGGCCACCAAGTCGTCGGTCTGGT
 
. : . : . : . : . : . :
JMFS162F07+ CCTTTATCCAGATTATGTAGGACCCGTTTTCGTCTACTAGTGTTGCTAGCCGTCTTACGA
JMFS132C09+ CCTTTATCCAGATTATGTAGGACCCGTTTTCGTCTACTAGTGTTGCTAGCCGTCTTACGA
JMFS102B10+ CCTTTATCCAGATTATGTAGGACCCGTTTTCGTCTACTAGTGTTGCTAGCCGTCTTACGA
                      ____________________________________________________________
consensus CCTTTATCCAGATTATGTAGGACCCGTTTTCGTCTACTAGTGTTGCTAGCCGTCTTACGA
 
. : . : . : . : . : . :
JMFS162F07+ GCTCCCCCACCAGTGCATCGGCGGCGGTGGCCATAGCGAAGTTGATCTCCGAGGTGTGGT
JMFS132C09+ GCTCCCCCACCAGTGCATCGGCGGCGGTGGCCATAGCGAAGTTGATCTCCGAGGTGTGGT
JMFS102B10+ GCTCCCCCACCAGTGCATCGGCGGCGGTGGCCATAGCGAAGTTGATCTCCGAGGTGTGGT
                      ____________________________________________________________
consensus GCTCCCCCACCAGTGCATCGGCGGCGGTGGCCATAGCGAAGTTGATCTCCGAGGTGTGGT
 
. : . : . : . : . : . :
JMFS162F07+ GGTTAACTGTGAAGTTGGGTAGCTTCTTCCATGGTTTCTGGGAGCTTAGTAAAGTAAAGT
JMFS132C09+ GGTTAACTGTGAAGTTGGGTAGCTTCTTCCATGGTTTCTGGGAGCTTAGTAAAGTAAAGT
JMFS102B10+ GGTTAACTGTGAAGTTGGGTAGCTTCTTCCATGGTTTCTGGGAGCTTAGTAAAGTAAAGT
                      ____________________________________________________________
consensus GGTTAACTGTGAAGTTGGGTAGCTTCTTCCATGGTTTCTGGGAGCTTAGTAAAGTAAAGT
 
. : . : . : . : . : . :
JMFS162F07+ AAAGTAAA
JMFS132C09+ AAAGTAAA
JMFS102B10+ AAAGTAAACTCTCTGGCGTTTGCTTCTCTTGTTCTTGGAAACTTCTGAGGAAGACTTTAA
                      ____________________________________________________________
consensus AAAGTAAACTCTCTGGCGTTTGCTTCTCTTGTTCTTGGAAACTTCTGAGGAAGACTTTAA