Contig 007644:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF045P03Sequence622007644 (5)ref|XP_011081956.1|2e-79PREDICTED: 3-ketoacyl-CoA synthase 10 [Sesamum indicum]590011214 (4)ref|XP_010049293.1|7e-47PREDICTED: 3-ketoacyl-CoA synthase 10 [Eucalyptus grandis] gb|KCW81820.1| hypoth
JMFF049P23Sequence622007644 (5)ref|XP_011081956.1|9e-78PREDICTED: 3-ketoacyl-CoA synthase 10 [Sesamum indicum]355011214 (4)ref|XP_009594847.1|1e-16PREDICTED: 3-ketoacyl-CoA synthase 10 [Nicotiana tomentosiformis]
JMFN009M04Sequence615007644 (5)ref|XP_011081956.1|4e-85PREDICTED: 3-ketoacyl-CoA synthase 10 [Sesamum indicum]
JMFS070A06Sequence642007644 (5)ref|XP_011081956.1|7e-91PREDICTED: 3-ketoacyl-CoA synthase 10 [Sesamum indicum]
JMFS093C12Sequence542007644 (5)ref|XP_011081956.1|1e-50PREDICTED: 3-ketoacyl-CoA synthase 10 [Sesamum indicum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS070A06+ GGC
                      ____________________________________________________________
consensus GGC
 
. : . : . : . : . : . :
JMFN009M04+ GATGCCGGAAGATTCTAATATCCTCCTCTGAAACTGCAGGCTT
JMFS070A06+ ACGTACGTTTCGTCTCCGATGCCGGAAGATTCTAATATCCTCCTCTGAAACTGCAGGCTT
JMFF049P23+ T
JMFF045P03+ T
                      ____________________________________________________________
consensus ACGTACGTTTCGTCTCCGATGCCGGAAGATTCTAATATCCTCCTCTGAAACTGCAGGCTT
 
. : . : . : . : . : . :
JMFN009M04+ GCTTCGTCGAATTTCNCCGACTTTCGGGCTAAATCGATGAATTGCTCCTTTGTTACCTTG
JMFS070A06+ GCTTCGTCGAATTTCCCCGACTTTCGGGCTAAATCGATGAATTGCTCCTTTGTTACCTTG
JMFF049P23+ GCTTCGTCGAATTTCCCCGACTTTCGGGCTAAATCGATGAATTGCTCCTTTGTTACCTTG
JMFF045P03+ GCTTCGTCGAATTTCCCCGACTTTCGGGCTAAATCGATGAATTGCTCCTTTGTTACCTTG
                      ____________________________________________________________
consensus GCTTCGTCGAATTTCCCCGACTTTCGGGCTAAATCGATGAATTGCTCCTTTGTTACCTTG
 
. : . : . : . : . : . :
JMFN009M04+ AGATCATCACTAGGTTTGAAGCATGCAAAATCAAGGAGATAAATAGGTCTAGGCTTGGAC
JMFS070A06+ AGATCATCACTAGGTTTGAAGCATGCAAAATCAAGGAGATAAATAGGTCTAGGCTTGGAC
JMFF049P23+ AGATCATCACTAGGTTTGAAGCATGCAAAATCAAGGAGATAAATAGGTCTAGGCTTGGAC
JMFF045P03+ AGATCATCACTAGGTTTGAAGCATGCAAAATCAAGGAGATAAATAGGTCTAGGCTTGGAC
JMFS093C12+ GGAC
                      ____________________________________________________________
consensus AGATCATCACTAGGTTTGAAGCATGCAAAATCAAGGAGATAAATAGGTCTAGGCTTGGAC
 
. : . : . : . : . : . :
JMFN009M04+ ATGAAGTAAACCGAGAGGGTAAACACAAGAACAACCAGAAAAGACAAGACGGTGGCCAAA
JMFS070A06+ ATGAAGTAAACCGAGAGGGTAAACACAAGAACAACCAGAAAAGACAAGACGGTGGCCAAA
JMFF049P23+ ATGAAGTAAACCGAGAGGGTAAACACAAGAACAACCAGAAAAGACAAGACGGTGGCCAAA
JMFF045P03+ ATGAAGTAAACCGAGAGGGTAAACACAAGAACAACCAGAAAAGACAAGACGGTGGCCAAA
JMFS093C12+ ATGAAGTAAACCGAGAGGGTAAACACAAGAACAACCAGAAAAGACAAGACGGTGGCCAAA
                      ____________________________________________________________
consensus ATGAAGTAAACCGAGAGGGTAAACACAAGAACAACCAGAAAAGACAAGACGGTGGCCAAA
 
. : . : . : . : . : . :
JMFN009M04+ TCATATTTAGCGGTGCTTTCCCAGAGCATCTGCCACATCTCCGCCCTGCTAAGGCTCCCA
JMFS070A06+ TCATATTTAGCGGTGCTTTCCCAGAGCATCTGCCACATCTCCGCCCTGCTAAGGCTCCCA
JMFF049P23+ TCATATTTAGCGGTGCTTTCCCAGAGCATCTGCCACATCTCCGCCCTGCTAAGGCTCCCA
JMFF045P03+ TCATATTTAGCGGTGCTTTCCCAGAGCATCTGCCACATCTCCGCCCTGCTAAGGCTCCCA
JMFS093C12+ TCATATTTAGCGGTGCTTTCCCAGAGCATCTGCCACATCTCCGCCCTGCTAAGGCTCCCA
                      ____________________________________________________________
consensus TCATATTTAGCGGTGCTTTCCCAGAGCATCTGCCACATCTCCGCCCTGCTAAGGCTCCCA
 
. : . : . : . : . : . :
JMFN009M04+ ACCTCCGCGCCGAACACCGCCAGCAGCAGCGGCACGGTGGCCAAGTACACCCCGTGGCTG
JMFS070A06+ ACCTCCGCGCCGAACACCGCCAGCAGCAGCGGCACGGTGGCCAAGTACACCCCGTGGCTG
JMFF049P23+ ACCTCCGCGCCGAACACCGCCAGCAGCAGCGGCACGGTGGCCAAGTACACCCCGTGGCTG
JMFF045P03+ ACCTCCGCGCCGAACACCGCCAGCAGCAGCGGCACGGTGGCCAAGTACACCCCGTGGCTG
JMFS093C12+ ACCTCCGCGCCGAACACCGCCAGCAGCAGCGGCACGGTGGCCAAGTACACCCCGTGGCTG
                      ____________________________________________________________
consensus ACCTCCGCGCCGAACACCGCCAGCAGCAGCGGCACGGTGGCCAAGTACACCCCGTGGCTG
 
. : . : . : . : . : . :
JMFN009M04+ ATCAGATAATGGTACCCCAATTTCACGTACTTGAGGTTCACCGACTGCACGAAGTCCGGC
JMFS070A06+ ATCAGATAATGGTACCCCAATTTCACGTACTTGAGGTTCACCGACTGCACGAAGTCCGGC
JMFF049P23+ ATCAGATAATGGTACCCCAATTTCACGTACTTGAGGTTCACCGACTGCACGAAGTCCGGC
JMFF045P03+ ATCAGATAATGGTACCCCAATTTCACGTACTTGAGGTTCACCGACTGCACGAAGTCCGGC
JMFS093C12+ ATCAGATAATGGTACCCCAATTTCACGTACTTGAGGTTCACCGACTGCACGAAGTCCGGC
                      ____________________________________________________________
consensus ATCAGATAATGGTACCCCAATTTCACGTACTTGAGGTTCACCGACTGCACGAAGTCCGGC
 
. : . : . : . : . : . :
JMFN009M04+ AGCCGTCGCCGGACCCTGACGGAGAACGTCATCGAACCGGCATCCGGCCCCGACGACTGG
JMFS070A06+ AGCCGTCGCCGGACCCTGACGGAGAACGTCATCGAACCGGCATCCGGCCCCGACGACTGG
JMFF049P23+ AGCCGTCGCCGGACCCTGACGGAGAACGTCATCGAACCGGCATCCGGCCCCGACGACTGG
JMFF045P03+ AGCCGTCGCCGGACCCTGACGGAGAACGTCATCGAACCGGCATCCGGCCCCGACGACTGG
JMFS093C12+ AGCCGTCGCCGGACCCTGACGGAGAACGTCATCGAACCGGCATCCGGCCCCGACGACTGG
                      ____________________________________________________________
consensus AGCCGTCGCCGGACCCTGACGGAGAACGTCATCGAACCGGCATCCGGCCCCGACGACTGG
 
. : . : . : . : . : . :
JMFN009M04+ ATGCCGCGGTTCACGATCTCCGTCGACAGGAGGTGTTGCTCTTCGGCCATACTTTAGAAA
JMFS070A06+ ATGCCGCGGTTCACGATCTCCGTCGACAGGAGGTGTTGCTCTTCGGCCATACTTTAGAAA
JMFF049P23+ ATGCCGCGGTTCACGATCTCCGTCGACAGGAGGTGTTGCTCTTCGGCCATACTTTAGAAA
JMFF045P03+ ATGCCGCGGTTCACGATCTCCGTCGACAGGAGGTGTTGCTCTTCGGCCATACTTTAGAAA
JMFS093C12+ ATGCCGCGGTTCACGATCTCCGTCGACAGGAGGTGTTGCTCTTCGGCCATACTTTAGAAA
                      ____________________________________________________________
consensus ATGCCGCGGTTCACGATCTCCGTCGACAGGAGGTGTTGCTCTTCGGCCATACTTTAGAAA
 
. : . : . : . : . : . :
JMFN009M04+ TGA-TTTTTTTTTTCTTTTCTTTTGTAGCTATGGAAATGAAGCTTCT--TTTTTTTTTTT
JMFS070A06+ TGATTTTTTTTTTTCTTTTCTTTTGTAGCTATGGAAATGAAGCTTCT--TTTTTTTTTTT
JMFF049P23+ TGA-TTTTTTTTTTCTTTTCTTTTGTAGCTATGGAAATGAAGCTTCTTTTTTTTTTTTTT
JMFF045P03+ TGA-TTTTTTTTTTCTTTTCTTTTGTAGCTATGGAAATGAAGCTTCT--TTTTTTTTTTT
JMFS093C12+ TGATTTTTTTTTTTCTTTTCTTTTGTAGCTATGGAAATGAAGCTTCT--TTTTTTTTTTT
                      ____________________________________________________________
consensus TGA-TTTTTTTTTTCTTTTCTTTTGTAGCTATGGAAATGAAGCTTCT--TTTTTTTTTTT
 
. : . : . : . : . : . :
JMFN009M04+ TTCTTTCTTGGATTGCAGAAATAATGACGGTTATG
JMFS070A06+ TTCTTTCTTGGATTGCAGAAATAATGACGGTTATGGTGTTG
JMFF049P23+ TTCTTTCTTGGATTGCAGAAATAATGACGGTTATGGTGTTGATATTGGAAGGATGAAGAA
JMFF045P03+ TTCTTTCTTGGATTGCAGAAATAATGACGGTTATGGTGTTGATATTGGAAGGATGAAGAA
JMFS093C12+ TTCTTTCTTGGATTGCAGAAATAATGACGGTTATGGTGTTGATATTGGAAGGATGAAGAA
                      ____________________________________________________________
consensus TTCTTTCTTGGATTGCAGAAATAATGACGGTTATGGTGTTGATATTGGAAGGATGAAGAA
 
. : . : . : . : . : . :
JMFF049P23+ GATGTCTTT
JMFF045P03+ GATGACTTT
JMFS093C12+ GATGACTTTGGAGCAGATCAGAGGGTTTAGAAGAGTATTTATTTTGGAAGCTGGAGAAGA
                      ____________________________________________________________
consensus GATGACTTTGGAGCAGATCAGAGGGTTTAGAAGAGTATTTATTTTGGAAGCTGGAGAAGA