Contig 007613:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS052F08Sequence630007613 (4)emb|CDP08456.1|2e-06unnamed protein product [Coffea canephora]
JMFS066C07Sequence608007613 (4)emb|CDP08456.1|1e-25unnamed protein product [Coffea canephora]
JMFS130A12Sequence610007613 (4)emb|CDP08456.1|5e-25unnamed protein product [Coffea canephora]
JMSF046G20Sequence642007613 (4)emb|CDP08456.1|3e-26unnamed protein product [Coffea canephora]707001478 (2)ref|XP_011090167.1|144PREDICTED: uncharacterized protein LOC105170925 [Sesamum indicum]

Alignment

This contig is upended


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JMFS130A12+                                                       CCATATTAGAGCAGAC
JMFS066C07+                                                CTGAAATCCATATTAGAGCAGAC
JMSF046G20+                                              GCCTGAAATCCATATTAGAGCAGAC
                      ____________________________________________________________
consensus                                                GCCTGAAATCCATATTAGAGCAGAC
 
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JMFS130A12+           TCATCATTTGCCAAACGGAAAGGACAAAACTTGGGTTTTCCTCTTCTTCCATACTTGAGC
JMFS066C07+           TCATCATTTGCCAAACGGAAAGGACAAAACTTGGGTTTTCCTCTTCTTCCATACTTGAGC
JMSF046G20+           TCATCATTTGCCAAACGGAAAGGACAAAACTTGGGTTTTCCTCTTCTTCCATACTTGAGC
JMFS052F08+                                              TTTTCCTCTTCTTCCATACTTGAGC
                      ____________________________________________________________
consensus             TCATCATTTGCCAAACGGAAAGGACAAAACTTGGGTTTTCCTCTTCTTCCATACTTGAGC
 
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JMFS130A12+           AAGTGTGCCCCTTTCTTAAGAGCAGTTACAGCCTGCTCAATGTCCCTTTCAACAGGTCCA
JMFS066C07+           AAGTGTGCCCCTTTCTTAAGAGCAGTTACAGCCTGCTCAATGTCCCTTTCAACAGGTCCA
JMSF046G20+           AAGTGTGCCCCTTTCTTAAGAGCAGTTACAGCCTGCTCAATGTCCCTTTCAACAGGTCCA
JMFS052F08+           AAGTGTGCCCCTTT-TTAAGAGCAGTTACAGCCTGCTCAATGTCCCTTTCAACAGGTCCA
                      ____________________________________________________________
consensus             AAGTGTGCCCCTTTCTTAAGAGCAGTTACAGCCTGCTCAATGTCCCTTTCAACAGGTCCA
 
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JMFS130A12+           CCAGTTCTCCCAACATCCGAATTCATCCTATCCGCAATGTGAGAACCGAAGTACAAGCCC
JMFS066C07+           CCAGTTCTCCCAACATCCGAATTCATCCTATCCGCAATGTGAGAACCGAAGTACAAGCCC
JMSF046G20+           CCAGTTCTCNCAACATCNGAATTCATCCTATCCGCAATGTGAGAACCGAAGTACAAGCCC
JMFS052F08+           CCAGTTCTCCCAACATCCGAATTCATCCTATCCGCAATGTGAGAACTGAAGTACAAGCCC
                      ____________________________________________________________
consensus             CCAGTTCTCCCAACATCCGAATTCATCCTATCCGCAATGTGAGAACCGAAGTACAAGCCC
 
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JMFS130A12+           TAACTCTACTTAAAACCGCATCCCAAATCCAATTCATTACCAAGCCCATAGAGCCCTCCC
JMFS066C07+           TAACTCTACTTAAAACCGCATCCCAAATCCAATTCATTACCAAGCCCATAGAGCCCTCCC
JMSF046G20+           TAACTCTACTTAAAACCGCATCCCAAATCCAATTCATTACCAAGCCCATAGAGCCCTCCC
JMFS052F08+           TAACTCTACTTAAAACCGCATCCCAAATCCAATTCATTATCAAGCCCATAGAGCCCTCCC
                      ____________________________________________________________
consensus             TAACTCTACTTAAAACCGCATCCCAAATCCAATTCATTACCAAGCCCATAGAGCCCTCCC
 
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JMFS130A12+           ATCCCATGCAGCAATCATCTACCAATCAATCAGCCCAATTTACAAGCTCACCACGATTTC
JMFS066C07+           ATCCCATGCAGCAATCATCTACCAATCAATCAGCCCAATTTACAAGCTCACCACGATTTC
JMSF046G20+           ATCCCATGCAGCAATCATCTACCAATCAATCAGCCCAATTTACAAGCTCACCACGATTTC
JMFS052F08+           ATCCCATGCAGCAATCATCTACCAATCAATCAGCCCAATTTACAAGCTCACCACGATTTC
                      ____________________________________________________________
consensus             ATCCCATGCAGCAATCATCTACCAATCAATCAGCCCAATTTACAAGCTCACCACGATTTC
 
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JMFS130A12+           CGGAGCTCAAACACTAGGAAAACGGCGGATTATAGTCGCAGTGCAACGCGGAAGTGAAGC
JMFS066C07+           CGGAGCTCAAACACTAGGAAAACGGCGGATTATAGTCGCAGTGCAACGCGGAAGTGAAGC
JMSF046G20+           CGGAGCTCAAACACTAGGAAAACGGCGGATTATAGTCGCAGTGCAACGCGGAAGTGAAGC
JMFS052F08+           CGGAGCTCAAACACTAGGAAAACGGCGGATTATAGTCGCAGTGCAACGCGGAAGTGAAGC
                      ____________________________________________________________
consensus             CGGAGCTCAAACACTAGGAAAACGGCGGATTATAGTCGCAGTGCAACGCGGAAGTGAAGC
 
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JMFS130A12+           GGAGAGCGTGATTTCCAGTGAGTATAACAAGGAAGCGACGGATCGAGCGAGGAATCTCTG
JMFS066C07+           GGAGAGCGTGATTTCCAGTGAGTATAACAAGGAAGCGACGGATCGAGCGAGGAATCTCTG
JMSF046G20+           GGAGAGCGTGATTTCCAGTGAGTATAACAAGGAAGCGACGGATCGAGCGAGGAATCTCTG
JMFS052F08+           GGAGAGCGTGATTTCCAGTGAGTATAACAAGGAAGCGACGGATCGAGCGAGGAATCTCTG
                      ____________________________________________________________
consensus             GGAGAGCGTGATTTCCAGTGAGTATAACAAGGAAGCGACGGATCGAGCGAGGAATCTCTG
 
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JMFS130A12+           GAGTGAACTTCACTTTACTGAATGGCGGACGAACGGCCCTGCTGATATATATGCACAAAT
JMFS066C07+           GAGTGAACTTCACTTTACTGAATGGCGGACGAACGGCCCTGCTGATATATATGCACAAAT
JMSF046G20+           GAGTGAACTTCACTTTACTGAATGGCGGACGAACGGCCCTGNTGATATATATGCACAAAT
JMFS052F08+           GAGTGAACTTCACTTTACTGAATGGCGGACGAACGGCCCTGCTGATATATATGCACAAAT
                      ____________________________________________________________
consensus             GAGTGAACTTCACTTTACTGAATGGCGGACGAACGGCCCTGCTGATATATATGCACAAAT
 
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JMFS130A12+           ACACAAACACAGATATGCGTATGCATATTATAGAGAGAGATTAGGGGGAAAGTGAAGCAA
JMFS066C07+           ACACAAACACAGATATGCGTATGCATATTATAGAGAGAGATTAGGGGGAAAGTGAAGCAA
JMSF046G20+           ACACAAACACAGATATGCGTATGCATATTATAGAGAGAGATTAGGGGGAAAGTGAAGCAA
JMFS052F08+           ACACAAACACAGATATGCGTATGCATATTATAGAGAGAGATTAGGGGGAAAGTGAAGCTA
                      ____________________________________________________________
consensus             ACACAAACACAGATATGCGTATGCATATTATAGAGAGAGATTAGGGGGAAAGTGAAGCAA
 
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JMFS130A12+           CTAGGGATCAGCAGAATCTAAGTGTAATAATGGAGATATTCAAAA               
JMFS066C07+           CTAGGGATCAGCAGAATCTAAGTGTAATAATGGAGATATTCA                  
JMSF046G20+           CTAGGGATAAGCAGANTCTAAGTGTAATAATGGAGATATTCAAAAGAGCAGAGAAAATGA
JMFS052F08+           CTAGGGATCAGCAGAATCTAAGTGTAATAATGGAGATATTCATAAGAGCAGAGAAAATGA
                      ____________________________________________________________
consensus             CTAGGGATCAGCAGAATCTAAGTGTAATAATGGAGATATTCAAAAGAGCAGAGAAAATGA
 
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JMSF046G20+           ACGCTTTGATCNGAAT                                            
JMFS052F08+           ACGCTTTGATCTGAATATTAAATTGCAGGTAACGCAGGTGGGAGAAGACATTTAACTCCT
                      ____________________________________________________________
consensus             ACGCTTTGATCTGAATATTAAATTGCAGGTAACGCAGGTGGGAGAAGACATTTAACTCCT