Contig 007588:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF014J23Sequence552007588 (5)ref|XP_009765456.1|5e-20PREDICTED: putative ion channel POLLUX-like 2 isoform X1 [Nicotiana sylvestris]789012270 (4)ref|XP_009612696.1|6e-118PREDICTED: putative ion channel POLLUX-like 2 isoform X3 [Nicotiana tomentosifo
JMFS027G07Sequence595007588 (5)ref|XP_009612694.1|5e-04PREDICTED: putative ion channel POLLUX-like 2 isoform X1 [Nicotiana tomentosifo
JMSF003D06Sequence332007588 (5)ref|XP_009765457.1|5e-09PREDICTED: putative ion channel POLLUX-like 2 isoform X2 [Nicotiana sylvestris]756012270 (4)ref|XP_009612696.1|8e-128PREDICTED: putative ion channel POLLUX-like 2 isoform X3 [Nicotiana tomentosifo
JMSF012N16Sequence491007588 (5)ref|XP_009765456.1|4e-12PREDICTED: putative ion channel POLLUX-like 2 isoform X1 [Nicotiana sylvestris]742012270 (4)ref|XP_009612696.1|2e-126PREDICTED: putative ion channel POLLUX-like 2 isoform X3 [Nicotiana tomentosifo
JMSF042D06Sequence822007588 (5)ref|XP_009765456.1|2e-61PREDICTED: putative ion channel POLLUX-like 2 isoform X1 [Nicotiana sylvestris]696012270 (4)ref|XP_009612696.1|1e-110PREDICTED: putative ion channel POLLUX-like 2 isoform X3 [Nicotiana tomentosifo

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF042D06+ CCCATATAGCGAGCACAAAGCC
                      ____________________________________________________________
consensus CCCATATAGCGAGCACAAAGCC
 
. : . : . : . : . : . :
JMSF042D06+ CATCACACGTTCAATCCGTGTTCTTTGTTTTAGATGAGTAGATGATGAACACAGGCATGC
                      ____________________________________________________________
consensus CATCACACGTTCAATCCGTGTTCTTTGTTTTAGATGAGTAGATGATGAACACAGGCATGC
 
. : . : . : . : . : . :
JMSF042D06+ CCAGGCCTCCCAAAAGCAATCCTCAAGAGAATGTGCATTGGTCCTGAACTTAAAGAAGAG
                      ____________________________________________________________
consensus CCAGGCCTCCCAAAAGCAATCCTCAAGAGAATGTGCATTGGTCCTGAACTTAAAGAAGAG
 
. : . : . : . : . : . :
JMSF042D06+ GAAGCCACCAATCAGAACAAATACAAAGCATGAAACAAGAAGCACAACAAAAAACATGGC
                      ____________________________________________________________
consensus GAAGCCACCAATCAGAACAAATACAAAGCATGAAACAAGAAGCACAACAAAAAACATGGC
 
. : . : . : . : . : . :
JMSF042D06+ AACATTTTTCTCAAGTTGTATGTTGAATAAATATATTAGCCGTGAAAAACTCCATTTGAT
                      ____________________________________________________________
consensus AACATTTTTCTCAAGTTGTATGTTGAATAAATATATTAGCCGTGAAAAACTCCATTTGAT
 
. : . : . : . : . : . :
JMFF014J23+ TCAATGAAGGCAAGGACACTTCCAATCCCAAGAGGTGTTGGTTTGTTCAAGGAAT
JMSF042D06+ ATCTTTCAATGAAGGCAAGGACACTTCCAAT-CCAAGAGGTGTTGGTTTGTTCAAGGAAT
                      ____________________________________________________________
consensus ATCTTTCAATGAAGGCAAGGACACTTCCAATCCCAAGAGGTGTTGGTTTGTTCAAGGAAT
 
. : . : . : . : . : . :
JMFF014J23+ TAGATATACAAGCAAAAGGCAAACTCTGTGCACCAAATGCTTTAATCGCATAGAAGAATA
JMSF012N16+ CAAGCAAAAGGCAAACTCTGTGCACCAAATGCTTTAATCGCATAGAAGAATA
JMSF003D06+ CAAGCAAAAGGCAAACTCTGTGCACCAAATGCTTTAATCGCATAGAAGAATA
JMSF042D06+ TAGATATACAAGCAAAAGGCAAACTCTGTGCACCAAATGCTTTAATCGCATAGAAGAATA
                      ____________________________________________________________
consensus TAGATATACAAGCAAAAGGCAAACTCTGTGCACCAAATGCTTTAATCGCATAGAAGAATA
 
. : . : . : . : . : . :
JMFF014J23+ GTTCTCGGAATACGGTTGTCTTCATATTCATAGAATCTAGTTGTATCAATCTACAGGCGA
JMSF012N16+ GTTCTCGGAATACGGTTGTCTTCATATTCATAGAATCTAGTTGTATCAATCTACAGGCGA
JMSF003D06+ GTTCTCGGAATACGGTTGTCTTCATATTCATAGAATCTAGTTGTATCAATCTACAGGCGA
JMSF042D06+ GTTCTCGGAATACGGTTGTCTTCATATTCATAGAATCTAGTTGTATCAATCTACAGGCGA
JMFS027G07+ CGGAATACGGTTGTCTTCATATTCATAGAATCTAGTTGTATCAATCTACAGGCGA
                      ____________________________________________________________
consensus GTTCTCGGAATACGGTTGTCTTCATATTCATAGAATCTAGTTGTATCAATCTACAGGCGA
 
. : . : . : . : . : . :
JMFF014J23+ AATATGATGGCAATGCTGCTACTATGTGTCTTACGGGGGAGCCCTGAGAATTACTATTAA
JMSF012N16+ AATATGATGGCAATGCTGCTACTATGTGTCTTACGGGGGAGCCCTGAGAATTACTATTAA
JMSF003D06+ AATATGATGGCAATGCTGCTACTATGTGTCTTACGGGGGAGCCCTGAGAATTACTATTAA
JMSF042D06+ AATATGATGGCAATGCTGCTACTATGTGTCTTACGGGGGAGCCCTGAGAATTACTATTAA
JMFS027G07+ AATATGATGGCAATGCTGCTACTATGTGTCTTACGGGGGAGCCCTGAGAATTACTATTAA
                      ____________________________________________________________
consensus AATATGATGGCAATGCTGCTACTATGTGTCTTACGGGGGAGCCCTGAGAATTACTATTAA
 
. : . : . : . : . : . :
JMFF014J23+ GATCCATTTTCCGTAGCAAAGAATTGAAATATCCCAAGGCATTCTTAGTCAGCAAGCAAT
JMSF012N16+ GATCCATTTTCCGTAGCAAAGAATTGAAATATCCCAAGGCATTCTTAGTCAGCAAGCAAT
JMSF003D06+ GATCCATTTTCCGTAGCAAAGAATTGAAATATCCCAAGGCATTCTTAGTCAGCAAGCAAT
JMSF042D06+ GATCCATTTTCCGTAGCAAAGAATTGAAATATCCCAAGGCATTCTTAGTCAGCAAGCAAT
JMFS027G07+ GATCCATTTTCCGTAGCAAAGAATTGAAATATCCCAAGGCATTCTTAGTCAGCAAGCAAT
                      ____________________________________________________________
consensus GATCCATTTTCCGTAGCAAAGAATTGAAATATCCCAAGGCATTCTTAGTCAGCAAGCAAT
 
. : . : . : . : . : . :
JMFF014J23+ CCAACTTTCTGCATTTCATCTGATAATTGATATTGGTCCCATTGTTGCTTATTGGTGAGA
JMSF012N16+ CCAACTTTCTGCATTTCATCTGATAATTGATATTGGTCCCATTGTTGCTTATTGGTGAGA
JMSF003D06+ CCAACTTTCTGCATTTCATCTGATAATTGATATTGGTCCCATTGTTGCTTATTGGTGAGA
JMSF042D06+ CCAACTTTCTGCATTTCATCTGATAATTGATATTGGTCCCATTGTTGCTTATTGGTGAGA
JMFS027G07+ CCAACTTTCTGCATTTCATCTGATAATTGATATTGGTCCCATTGTTGCTTATTGGTGAGA
                      ____________________________________________________________
consensus CCAACTTTCTGCATTTCATCTGATAATTGATATTGGTCCCATTGTTGCTTATTGGTGAGA
 
. : . : . : . : . : . :
JMFF014J23+ AAGACTTCCGTAAAGCTGAAGGTGGGAAGCACCGGCAGGGGCATTGCAACGACTTTCTCA
JMSF012N16+ AAGACTTCCGTAAAGCTGAAGGTGGGAAGCACCGGCAGGGGCATTGCAACGACTTTCTCA
JMSF003D06+ AAGACTTCCGTAAAGCTGAAGGTGGGAAGCACCGGC
JMSF042D06+ AAGACTTCCGTAAAGCTGAAGGTGGGAAGCACCGGCAGGGGCATTGCAACGACTTTCTCA
JMFS027G07+ AAGACTTCCGTAAAGCTGAAGGTGGGAAGCACCGGCAGGGGCATTGCAACGACTTTCTCA
                      ____________________________________________________________
consensus AAGACTTCCGTAAAGCTGAAGGTGGGAAGCACCGGCAGGGGCATTGCAACGACTTTCTCA
 
. : . : . : . : . : . :
JMFF014J23+ TAGAAGGAGATATCTGATAGAATCTTGGAGTGGGTGGTGTGGGCATCCATGTCGTGGGCG
JMSF012N16+ TAGAAGGAGATATCTGATAGAATCTTGGAGTGGGTGGTGTGGGCATCCATGTCGTGGGCG
JMSF042D06+ TAGAAGGAGATATCTGATAGAATCTTGGAGTGGGTGGTGTGGGCATCCATGTCGTGGGCG
JMFS027G07+ TAGAAGGAGATATCTGATAGAATCTTGGAGTGGGTGGTGTGGGCATCCATGTCGTGGGCG
                      ____________________________________________________________
consensus TAGAAGGAGATATCTGATAGAATCTTGGAGTGGGTGGTGTGGGCATCCATGTCGTGGGCG
 
. : . : . : . : . : . :
JMFF014J23+ GGCAATGCAATTGAATCATTCCTCTGTTTCACCTTTTTCCCCCCTTCCTCAGAAATTAAT
JMSF012N16+ GGCAATGCAATTGAATCATTCCTCTGTTTCACCTTTTTCCCCCCTTCCTCAGAAATTAAT
JMSF042D06+ GGCAATGCAATTGAATCATTCCTCTGTTTCACCTTTTTCCCCCCTTCCTCAGAAATTAAT
JMFS027G07+ GGCAATGCAATTGAATCATTCCTCTGTTTCACCTTTTTCCCCCCTTCCTCAGAAATTAAT
                      ____________________________________________________________
consensus GGCAATGCAATTGAATCATTCCTCTGTTTCACCTTTTTCCCCCCTTCCTCAGAAATTAAT
 
. : . : . : . : . : . :
JMFF014J23+ TGAAAATACCCACTCAC
JMSF012N16+ TGAAAATACCCATTCAC
JMSF042D06+ TGAAAATACCCATTCAC
JMFS027G07+ TGAAAATACCCATTCACTAGGGGCGAAGATTTCGAGGTTTCAGTCTATATATACACAATT
                      ____________________________________________________________
consensus TGAAAATACCCATTCACTAGGGGCGAAGATTTCGAGGTTTCAGTCTATATATACACAATT
 
. : . : . : . : . : . :
JMFS027G07+ GTTCCATATTAAAAACATTTTTTTAAAAAATAAATAAAGAAAACTGTATACAAAGAGTGT
                      ____________________________________________________________
consensus GTTCCATATTAAAAACATTTTTTTAAAAAATAAATAAAGAAAACTGTATACAAAGAGTGT
 
. : . : . : . : . : . :
JMFS027G07+ TCTTTCTTGTTAAACCAAAACAAACAAACAAACAAACAAAAGTTTAAAATTTTTTAATCG
                      ____________________________________________________________
consensus TCTTTCTTGTTAAACCAAAACAAACAAACAAACAAACAAAAGTTTAAAATTTTTTAATCG