Contig 007559:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003K04Sequence614016244emb|CDP06811.1|2e-20unnamed protein product [Coffea canephora]701007559 (2)gb|AAL27150.1|2e-12bZIP transcription factor [Nicotiana tabacum]
JMFN044F12Sequence528007559 (2)

Alignment

This contig is upended


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rJMFF003K04+                                                                     G
                      ____________________________________________________________
consensus                                                                        G
 
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rJMFF003K04+          CTGACATATCCTCAATGGGCATGCAATCCTTTCCTTGGCAATCCAACTGACACATCAATT
                      ____________________________________________________________
consensus             CTGACATATCCTCAATGGGCATGCAATCCTTTCCTTGGCAATCCAACTGACACATCAATT
 
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rJMFF003K04+          GATGCTGCTCTCCCCTGTTCAAAATGACCCCAATCATCATCGCTATTATCAATCTCCTTC
                      ____________________________________________________________
consensus             GATGCTGCTCTCCCCTGTTCAAAATGACCCCAATCATCATCGCTATTATCAATCTCCTTC
 
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rJMFF003K04+          AGGTGTTCACTTTCAGCCCCATGATCCCATAATCCAGAACGGCCTGGTTGACATTCCACC
                      ____________________________________________________________
consensus             AGGTGTTCACTTTCAGCCCCATGATCCCATAATCCAGAACGGCCTGGTTGACATTCCACC
 
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rJMFF003K04+          AATAAATAATATGCTGCAGGTCCCAGCTACAGCAACAGTTGGGGCTAATGGAATAGGGAG
JMFN044F12-                       GCTGCAGGTCCCAGCTACAGCAACAGTTGGGGCTAATGGAATAGGGAG
                      ____________________________________________________________
consensus             AATAAATAATATGCTGCAGGTCCCAGCTACAGCAACAGTTGGGGCTAATGGAATAGGGAG
 
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rJMFF003K04+          AGCAACTGCAGTACCACCAGCAACAGTTGGGGCTAGCGGGTTAGCGAGACCAACTGCTCT
JMFN044F12-           AGCAACTGCAGTACCACCAGCAACAGTTGGGGCTAGCGGGTTAGCGAGACCAACTGCTCT
                      ____________________________________________________________
consensus             AGCAACTGCAGTACCACCAGCAACAGTTGGGGCTAGCGGGTTAGCGAGACCAACTGCTCT
 
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rJMFF003K04+          ACCACCACCAACAGTTGTGTCGAGCGGGATGGCAGGGAGAGCAACTGCACTACCACCAGC
JMFN044F12-           ACCACCACCAACAGTTGTGTCGAGCGGGATGGCAGGGAGAGCAACTGCACTACCACCAGC
                      ____________________________________________________________
consensus             ACCACCACCAACAGTTGTGTCGAGCGGGATGGCAGGGAGAGCAACTGCACTACCACCAGC
 
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rJMFF003K04+          AACAGTTATGGCTAGCGGGATAGCGAGACCAAGTGCAGTACCAGTACCACCAGCAACAGC
JMFN044F12-           AACAGTTATGGCTAGCGGGATAGCGAGACCAAGTGCAGTACCAGTACCACCAGCAACAGC
                      ____________________________________________________________
consensus             AACAGTTATGGCTAGCGGGATAGCGAGACCAAGTGCAGTACCAGTACCACCAGCAACAGC
 
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rJMFF003K04+          TGGGGCTAGCGGGATAGGGAGAGCAACTGCAGTATCACCAGCAACAGTTGGGGGTAGCGG
JMFN044F12-           TGGGGCTAGCGGGATAGGGAGAGCAACTGCAGTATCACCAGCAACAGTTGGGGGTAGCGG
                      ____________________________________________________________
consensus             TGGGGCTAGCGGGATAGGGAGAGCAACTGCAGTATCACCAGCAACAGTTGGGGGTAGCGG
 
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rJMFF003K04+          GATAGGGAGAGCAACAGGTGGGGCTAGTGGAATAGGGGGAGCAGCTGCGGGATCAACACA
JMFN044F12-           GATAGGGAGAGCAACAGGTGGGGCTAGTGGAATAGGGGGAGCAGCTGCGGGATCAACACA
                      ____________________________________________________________
consensus             GATAGGGAGAGCAACAGGTGGGGCTAGTGGAATAGGGGGAGCAGCTGCGGGATCAACACA
 
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rJMFF003K04+          TCCAATGGTGAGCATGGAACATTTCCAGAAGCACAAGTAGGGGTGTTTGGTGGAACTCTG
JMFN044F12-           TCCAATGGTGAGCATGGAACATTTCCAGAAGCACAAGTAGGGGTGTTTGGTGGAACTCTG
                      ____________________________________________________________
consensus             TCCAATGGTGAGCATGGAACATTTCCAGAAGCACAAGTAGGGGTGTTTGGTGGAACTCTG
 
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rJMFF003K04+          GGTGGGTGGGGGGCAATGATGCATAGAAACTGACCACCTAATTGACGATTTTGTCAAAAG
JMFN044F12-           GGTGGGTGGGGGGCAATGATGCATAGAAACTGACCACCTAATTGACGATTTTGTCAAAAG
                      ____________________________________________________________
consensus             GGTGGGTGGGGGGCAATGATGCATAGAAACTGACCACCTAATTGACGATTTTGTCAAAAG
 
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rJMFF003K04+          AGATTGGATTAATAACTTAGTTATGTGTTTACATAGCTAA                    
JMFN044F12-           AGATTGGATTAATAACTTAGTTATGTGTTTACATAGCTAATGTAAAATGCATTATTTTCT
                      ____________________________________________________________
consensus             AGATTGGATTAATAACTTAGTTATGTGTTTACATAGCTAATGTAAAATGCATTATTTTCT