Contig 007527:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002C24Sequence566003366 (5)ref|XP_004237268.1|164PREDICTED: uncharacterized protein LOC101265533 [Solanum lycopersicum]223007527 (4)
JMFF010F12Sequence192007527 (4)
JMFF018C05Sequence597003366 (5)ref|XP_004237268.1|168PREDICTED: uncharacterized protein LOC101265533 [Solanum lycopersicum]296007527 (4)
JMFN017H23Sequence532007527 (4)ref|XP_009786299.1|79.7PREDICTED: uncharacterized protein LOC104234435 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFN017H23-                   TTTTCAGGAGGTGAAGTAGTAGCAGCAAATGGAAACCCAGATAGATTAGGAA
                      ____________________________________________________________
consensus                     TTTTCAGGAGGTGAAGTAGTAGCAGCAAATGGAAACCCAGATAGATTAGGAA
 
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JMFN017H23-           ATCCCCTTCAAATTGGAGAACAGCCTGATATCCGCCCACCTGAGAACGGAGCCAACCCCA
                      ____________________________________________________________
consensus             ATCCCCTTCAAATTGGAGAACAGCCTGATATCCGCCCACCTGAGAACGGAGCCAACCCCA
 
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JMFN017H23-           ACCCCAACCCCAACCCCAACCCCGGAGCCATGAATCCATTTAGCTCCTTACTGTTGTGGA
                      ____________________________________________________________
consensus             ACCCCAACCCCAACCCCAACCCCGGAGCCATGAATCCATTTAGCTCCTTACTGTTGTGGA
 
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JMFN017H23-           TTTTGGGGGGTGCTACTTCTGAAAGTGTCAACTCCTTCCTTTCCATATTCAGAGACCATG
                      ____________________________________________________________
consensus             TTTTGGGGGGTGCTACTTCTGAAAGTGTCAACTCCTTCCTTTCCATATTCAGAGACCATG
 
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rJMFF018C05+           TCAAGTTTNTGCAGCNGGTNACCCCNGNCAAGAAAATNGGGCATCNCAGNCTGNTGAAT
rJMFF002C24+                                                                 TGAAT
JMFN017H23-           CTCAAGTTTATGCAGCAGGTAACCCCAGACAAGAAAATCGGGCATCACAGACTGCTGAAT
                      ____________________________________________________________
consensus             CTCAAGTTTATGCAGCAGGTAACCCCAGACAAGAAAATCGGGCATCACAGACTGCTGAAT
 
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rJMFF018C05+          NGAATGGGGNCTTTGTNCTTTNATNGAAAAAAAAAAAATGGTACTTAAAAGCTGACGTTA
rJMFF002C24+          AGAATGGNGNCTTTGTNCTTTAATNGAAAAAAAAAAAATGGTACTTAAAAGCTGACGTTA
rJMFF010F12+                                   GAAAAAAAAAAAATGGTACTTAAAAGCTGACGTTA
JMFN017H23-           AGAATGGCGACTTTGTACTTTAATAGAAAAAAAAAAAATGGTACTTAAAAGCTGACGTTA
                      ____________________________________________________________
consensus             AGAATGGGGACTTTGTACTTTAATAGAAAAAAAAAAAATGGTACTTAAAAGCTGACGTTA
 
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rJMFF018C05+          ATTACCCGCAGAATGCAAGAAAGAGTTGAAGAAGGGCAGGATTGCATTTTCTAGCAAAAG
rJMFF002C24+          ATTACCCGCAGAATGCAAGAAAGAGTTGAAGAAGGGCAGGATTGCATTTTCTAGCAAAAG
rJMFF010F12+          ATTACCCGCAGAATGCAAGAAAGAGTTGAAGAAGGGCAGGATTGCATTTTCTAGCAAAAG
JMFN017H23-           ATTACCCGCAGAATGCAAGAAAGAGTTGAAGAAGGGCAGGATTGCATTTTCTAGCAAAAG
                      ____________________________________________________________
consensus             ATTACCCGCAGAATGCAAGAAAGAGTTGAAGAAGGGCAGGATTGCATTTTCTAGCAAAAG
 
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rJMFF018C05+          ACAGGCACAATGTTTAAAGCTCTAGCTAAGAATTAATGAATTAGAGGAAACCATGTTCAA
rJMFF002C24+          ACAGGCACAATGTTTAAAGCTCTAGCTAAGAATTAATGAATTAGAGGAAACCATGTTCAA
rJMFF010F12+          ACAGGCACAATGTTTAAAGCTCTAGCTAAGAATTAATGAATTAGAGGAAACCATGTTCAA
JMFN017H23-           ACAGGCACAATGTTTAAAGCTCTAGCTAAGAATTAATGAATTAGAGGAAACCATGTTCAA
                      ____________________________________________________________
consensus             ACAGGCACAATGTTTAAAGCTCTAGCTAAGAATTAATGAATTAGAGGAAACCATGTTCAA
 
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rJMFF018C05+          TTGTAATATCCATGTACAGAGAGTCAGTGATGATATCATAGTGATTTTGTCGTATTA   
rJMFF002C24+          TTGTAATATCCATGTACAGAGAGTCAGTGATGATATCA                      
rJMFF010F12+          TTGTAATATCCATGTACAGAGAGTCAGTG                               
JMFN017H23-           TTGTAATATCCATGTACAGAGAGTCAGTGATGATATCATAGTGATTTTGTCGTATTAGGT
                      ____________________________________________________________
consensus             TTGTAATATCCATGTACAGAGAGTCAGTGATGATATCATAGTGATTTTGTCGTATTAGGT