Contig 007523:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN013H01Sequence615007523 (4)
JMFN016J08Sequence612007523 (4)
JMFN029N03Sequence618007523 (4)
JMFS128C04Sequence452007523 (4)

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS128C04+ GCGCGTAAATCTTATTATTATTATTATTTCTTTGTAGTCGCACGTGCA
                      ____________________________________________________________
consensus GCGCGTAAATCTTATTATTATTATTATTTCTTTGTAGTCGCACGTGCA
 
. : . : . : . : . : . :
JMFS128C04+ AAAATTACAACTATTGGGGATGTTCTTAGGTGTCTAACACAAAATAACAGAACATATTTC
JMFN013H01+ AGAACATATTTC
JMFN029N03+ AGAACATATTTC
JMFN016J08+ AGAACATATTTC
                      ____________________________________________________________
consensus AAAATTACAACTATTGGGGATGTTCTTAGGTGTCTAACACAAAATAACAGAACATATTTC
 
. : . : . : . : . : . :
JMFS128C04+ CTCCTTGTGTCAAGCCATCAACATGAGGAATAGATTGGATGACACTATTGCTGCAACAAT
JMFN013H01+ CTCCGTGTGTCAAGCCATCAACATGAGGAATAGATTGGATGACACTATTGTTGCAACAAT
JMFN029N03+ CTCCTTGTGTCAAGCCATCAACATGAGGAATAGATTGGATGACACTATTGCTGCAACAAT
JMFN016J08+ CTCCTTGTGTCAAGCCATCAACATGAGGAATAGATTGGATGACACTATTGCTGCAACAAT
                      ____________________________________________________________
consensus CTCCTTGTGTCAAGCCATCAACATGAGGAATAGATTGGATGACACTATTGCTGCAACAAT
 
. : . : . : . : . : . :
JMFS128C04+ AATACGTGCACTAACCCTCAAACTTCCAACACTGGAGTCATCATCTCCAGTTGGGGCAGG
JMFN013H01+ AGCACCTGCACTAACCCTCAAACTCCTTCCCACACTGGAGTCATCTTCAGTTGGGGCAGG
JMFN029N03+ AATACGTGCACTAACCCTCAAACTTCCAACACTGGAGTCATCATCTCCAGTTGGGGCAGG
JMFN016J08+ AATACGTGCACTAACCCTCAAACTTCCAACACTGGAGTCATCATCTCCAGTTGGGGCAGG
                      ____________________________________________________________
consensus AATACGTGCACTAACCCTCAAACTTCCAACACTGGAGTCATCATCTCCAGTTGGGGCAGG
 
. : . : . : . : . : . :
JMFS128C04+ TGATGCGGCAGGCGTGATAGTATTTGGTGGCAGTGATGGCGACAACATCTTCCTTGGGCT
JMFN013H01+ TGATGCGGCAGGCGTAATAATATTTGGTGGCAGTGGTGGTGACAACATCTTCCTAGGGCT
JMFN029N03+ TGATGCGGCAGGCGTGATAGTATTTGGTGGCAGTGATGGCGACAACATCTTCCTTGGGCT
JMFN016J08+ TGATGCGGCAGGCGTGATAGTATTTGGTGGCAGTGATGGCGACAACATCTTCCTTGGGCT
                      ____________________________________________________________
consensus TGATGCGGCAGGCGTGATAGTATTTGGTGGCAGTGATGGCGACAACATCTTCCTTGGGCT
 
. : . : . : . : . : . :
JMFS128C04+ AGGCGCTGCCCCGGGTGTGATTGGGCCAGCAGGTTGAGGAGGATTAGTGCTCGGGCTAGT
JMFN013H01+ AGGTGCTGCCCCGGGTGTGATTGGGCCAGCAGGTTGAGGGGGATTAGTGCTCGGGCTAGT
JMFN029N03+ AGGCGCTGCCCCGGGTGTGATTGGGCCAGCAGGTTGAGGAGGATTAGTGCTCGGGCTAGT
JMFN016J08+ AGGCGCTGCCCCGGGTGTGATTGGGCCAGCAGGTTGAGGAGGATTAGTGCTCGGGCTAGT
                      ____________________________________________________________
consensus AGGCGCTGCCCCGGGTGTGATTGGGCCAGCAGGTTGAGGAGGATTAGTGCTCGGGCTAGT
 
. : . : . : . : . : . :
JMFS128C04+ AGGGGCTGCGCGGTTCGGGCTAGTAGGGGCGGCGCCTTTCGGGCTGGC-GGTGAGGTACT
JMFN013H01+ AGGGGCTCCGCCCTTCGGGCTAGTAGGGGCTGCGCCGTTCGGGCTAGCAGGGGGGGTGCT
JMFN029N03+ AGGGGCTGCGCGGTTCGGGCTAGTAGGGGCGGCGCCTTTCGGGCTGGC-GGTGAGGTACT
JMFN016J08+ AGGGGCTGCGCGGTTCGGGCTAGTAGGGGCGGCGCCTTTCGGGCTGGC-GGTGAGGTACT
                      ____________________________________________________________
consensus AGGGGCTGCGCGGTTCGGGCTAGTAGGGGCGGCGCCTTTCGGGCTGGC-GGTGAGGTACT
 
. : . : . : . : . : . :
JMFS128C04+ TGTTGGGCTAGCAAGTGGGGCATTGGTCGGGGTCGGGTTAGC
JMFN013H01+ GGTTGGGGTAGCAGGTGGGGCATTGGTTGGGGTCGGGTTAGCTGGCGGGGCATTGGTCGG
JMFN029N03+ TGTTGGGCTAGCAAGTGGGGCATTGGTCGGGGTCGGGTTAGCAGGCGGGGCATTGGTCGG
JMFN016J08+ TGTTGGGCTAGCAAGTGGGGCATTGGTCGGGGTCGGGTTAGCAGGCGGGGCATTGGTCGG
                      ____________________________________________________________
consensus TGTTGGGCTAGCAAGTGGGGCATTGGTCGGGGTCGGGTTAGCAGGCGGGGCATTGGTCGG
 
. : . : . : . : . : . :
JMFN013H01+ GCTGGAAGGAGATGGAACTGGAGAAGTTGCAAGAACCGAATTTGTTTTTGCAGAGTTGTG
JMFN029N03+ GCTAGAAGGAGATGGAACTGGAGAAGCTGCAAGAACAGAATTTGTATTTGCAGAGTTGTG
JMFN016J08+ GCTAGAAGGAGATGGAACTGGAGAAGCTGCAAGAACAGAATTTGTATTTGCAGAGTTGTG
                      ____________________________________________________________
consensus GCTAGAAGGAGATGGAACTGGAGAAGCTGCAAGAACAGAATTTGTATTTGCAGAGTTGTG
 
. : . : . : . : . : . :
JMFN013H01+ ATTGACTAAAGGAAGAGTGACTGTAGTGGTGATGTTCATGGCTGCACCACTACTGAACAG
JMFN029N03+ ATTGACTAAAGGAAGAGTGACTGTAGTGGTGATGTTCATGGCTGCACCACTACTGAACAG
JMFN016J08+ ATTGACTAAAGGAAGAGTGACTGTAGTGGTGATGTTCATGGCTGCACCACTACTGAACAG
                      ____________________________________________________________
consensus ATTGACTAAAGGAAGAGTGACTGTAGTGGTGATGTTCATGGCTGCACCACTACTGAACAG
 
. : . : . : . : . : . :
JMFN013H01+ AAGGATGACGGAGAAGAATATGATCTTGGAATCCATTTTGAGGGGTTTATTTTGCTTTTA
JMFN029N03+ AAGGGTGATGGAGAAGAATATGATCTTGGAATCCATTTTGAGGGGTTTATTTCGCTTTTA
JMFN016J08+ AAGGGTGATGGAGAAGAATATGATCTTGGAATCCATTTTGAGGGGTTTATTTCGCTTTTA
                      ____________________________________________________________
consensus AAGGGTGATGGAGAAGAATATGATCTTGGAATCCATTTTGAGGGGTTTATTTCGCTTTTA
 
. : . : . : . : . : . :
JMFN013H01+ TTTTCTGTTGTTTTGTTT
JMFN029N03+ TTTTCTGTTGTTTTGTTTCGG
JMFN016J08+ TTTTCTGTTGTTTTGTTTCGGXXXXXXXXXXXXXXXXXXXXXXXXXXGTTTTTGCTTTTG
                      ____________________________________________________________
consensus TTTTCTGTTGTTTTGTTTCGGNNNNNNNNNNNNNNNNNNNNNNNNNNGTTTTTGCTTTTG