Contig 007490:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006A21Sequence497007490 (7)gb|ADX36104.1|5e-69Fe-superoxide dismutase [Haberlea rhodopensis]764007490 (7)ref|XP_009773810.1|2e-83PREDICTED: superoxide dismutase [Fe], chloroplastic [Nicotiana sylvestris]
JMFF025D06Sequence587007490 (7)gb|ADX36104.1|8e-55Fe-superoxide dismutase [Haberlea rhodopensis]710007490 (7)ref|XP_009599437.1|2e-54PREDICTED: superoxide dismutase [Fe], chloroplastic isoform X2 [Nicotiana tomen
JMFF050B01Sequence620007490 (7)gb|ADX36104.1|1e-64Fe-superoxide dismutase [Haberlea rhodopensis]414007490 (7)
JMFS106A10Sequence627007490 (7)ref|XP_009773810.1|5e-94PREDICTED: superoxide dismutase [Fe], chloroplastic [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMFF050B01- CCTTAT
                      ____________________________________________________________
consensus CCTTAT
 
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rJMFF050B01- GGCGGATCACCCTGGAGAGTTTTTTTTTTTTTTTTCXXXXXXXXXXXXXXXXXXXXXXXX
                      ____________________________________________________________
consensus GGCGGATCACCCTGGAGAGTTTTTTTTTTTTTTTTCNNNNNNNNNNNNNNNNNNNNNNNN
 
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rJMFF050B01- XAAACAAACGAAAACGATTTTTATTCATATCATCAATCAGAACATTACAAACAACAAGAG
rJMFF025D06- TATTCATATCATCAATCAGAACATTACAAACAACAAGAG
                      ____________________________________________________________
consensus NAAACAAACGAAAACGATTTTTATTCATATCATCAATCAGAACATTACAAACAACAAGAG
 
. : . : . : . : . : . :
rJMFF050B01- GGGAAGAGACTCACTCCTTAAGTAAAAACAGACTCTCTAGCTGCTAACAAATGAACAGCC
rJMFF025D06- GGGAAGAGACTCACTCCTTAAGTAGAAACAGACTCTCTAGCTGCTAACAAATGAACAGCC
                      ____________________________________________________________
consensus GGGAAGAGACTCACTCCTTAAGTAGAAACAGACTCTCTAGCTGCTAACAAATGAACAGCC
 
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rJMFF050B01- TTATTCACTGAACGTTTAATAAAAGATATACCAATCTGAGTAAACCTACTCATCAGATAT
rJMFF025D06- TTATTCACTGAACGTTTAATAAAAGATATACCAATCTGAGTAAACCTACTCATCAGATAT
rJMFF006A21- AATCTGAGTAAACCTACTCATCAGATAT
                      ____________________________________________________________
consensus TTATTCACTGAACGTTTAATAAAAGATATACCAATCTGAGTAAACCTACTCATCAGATAT
 
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rJMFF050B01- ATGACAAAAGCAAAGAAAAACCATAGTTTGAGACAAAGCCTTGCACAACCACCTTGGCAT
rJMFF025D06- ATGACAAAAGCAAAGAAAAACCATAGTTTGAGACAAAGCCTTGCACAACCACCTTGGCAT
rJMFF006A21- ATGACAAAAGCAAAGAAAAACCATAGTTTGAGACAAAGCCTTGCACAACCACCTTGGCAT
                      ____________________________________________________________
consensus ATGACAAAAGCAAAGAAAAACCATAGTTTGAGACAAAGCCTTGCACAACCACCTTGGCAT
 
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rJMFF050B01- CAGATTCCAAAAAAA
rJMFF025D06- CAGATTCCAAAAAAAAAACAAAACAGAAAAAGCATTATATCTGTTACTGAAAGANAACAA
rJMFF006A21- CAGATTCCAAAAAAAAAACAAAACAGAAAAAGCATTATATCTGTTACTGAAAGAGAACAA
                      ____________________________________________________________
consensus CAGATTCCAAAAAAAAAACAAAACAGAAAAAGCATTATATCTGTTACTGAAAGAGAACAA
 
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rJMFF025D06- AAAATCATTCANATTCAGCTTCANAATTTTGTTTCACTTTCAGCATACACCTCACTAGGG
rJMFF006A21- AAAATCATTCANATTCAGCTTCANAATTTTGTTTCACTTTCAGCATACACCTCACTAGGG
                      ____________________________________________________________
consensus AAAATCATTCANATTCAGCTTCANAATTTTGTTTCACTTTCAGCATACACCTCACTAGGG
 
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rJMFF025D06- TCAGNGCTTCTTTGTTCACCCTCTTCTTATCTCTTCTGAAGCCTTTGCTGCCTCTAAGCG
rJMFF006A21- TCAGNGCTTCTTTGTTCACCCTCTTCTTATCTCTTCTGAAGCCTTTGCTGCCTCTAAGCG
                      ____________________________________________________________
consensus TCAGNGCTTCTTTGTTCACCCTCTTCTTATCTCTTCTGAAGCCTTTGCTGCCTCTAAGCG
 
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rJMFF025D06- AGCGCTGACTGCTTCCCACGATACAAGGTTCTCCATAAAAATANAAATGTAGTCGGGGCG
rJMFF006A21- AGCGCTGACTGCTTCCCACGATACAAGGTTCTCCATAAAAATANAAATGTAGTCGGGGCG
                      ____________________________________________________________
consensus AGCGCTGACTGCTTCCCACGATACAAGGTTCTCCATAAAAATANAAATGTAGTCGGGGCG
 
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rJMFF025D06- TCNATTCTGGTAGTCTAGGTAGTAAGCATGCTCCCAAACATCTATTGTTAGGAGTGGANA
rJMFF006A21- TCGATTCTGGTAGTCTAGGTAGTAAGCATGCTCCCAAACATCTATTGTTAGGAGTGGANA
JMFS106A10+ TGCTCCCAAACATCTATTGTTAGGAGTGGAGA
                      ____________________________________________________________
consensus TCGATTCTGGTAGTCTAGGTAGTAAGCATGCTCCCAAACATCTATTGTTAGGAGTGGAGA
 
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rJMFF025D06- GTAATCCAANACAANAGGGTTTACAGCATTGGGAGTTTTAACAATTACAAGCTTCTTGTC
rJMFF006A21- GTAATCCAAGACAANAGGGTTTACAGCATTGGGAGTTTTAACAATTACAAGCTTCTTGTC
JMFS106A10+ GTAATCCAAGACAAGAGGGTTTACAGCATTGGGAGTTTTAACAATTACAAGCTTCTTGTC
                      ____________________________________________________________
consensus GTAATCCAAGACAAGAGGGTTTACAGCATTGGGAGTTTTAACAATTACAAGCTTCTTGTC
 
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rJMFF025D06- TTCGTCGGGATTTCCCACATTAAGTTTGTTGGCCTTGTATGCAAGCCATGCCCAGCCAGA
rJMFF006A21- TTCGTCGGGATTTCCCACATTAAGTTTGTTGGCCTTGTATGCAAGCCATGCCCAGCCANA
JMFF006A21+ TTGTATGCAAGCCATGCCCAGCCAGA
JMFF025D06+ GGGATTTCCCACATTAAGTTTGTTGGCCTTGTATGCAAGCCATGCCCAGCCAGA
JMFS106A10+ TTCGTCGGGATTTCCCACATTAAGTTTGTTGGCCTTGTATGCAAGCCATGCCCAGCCAGA
JMFF050B01+ TGCAAGCCATGCCCAGCCAGA
                      ____________________________________________________________
consensus TTCGTCGGGATTTCCCACATTAAGTTTGTTGGCCTTGTATGCAAGCCATGCCCAGCCAGA
 
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rJMFF025D06- GCCAAATTGTGTTGCCGCAGCAACCTTGAACTCCTTCATAAATGTCTCAAACGAACCGAA
rJMFF006A21- GCCAAATTGTGTTGCCGCAGCAGCCTTGAACTCCTTCATAAATGTCTCAAACGAACCGAA
JMFF006A21+ GCCAAATTGTGTTGCCGCAGCAGCCTTGAACTCCTTCATAAATGTCTCAAACGAACCGAA
JMFF025D06+ GCCAAATTGTGTTGCCGCAGCAACCTTGAACTCCTTCATAAATGTCTCAAACGAACCGAA
JMFS106A10+ GCCAAATTGTGTTGCCGCAGCAGCCTTGAACTCCTTCATAAATGTCTCAAACGAACCGAA
JMFF050B01+ GCCAAATTGTGTTGCCGCAGCAGCCTGAACTCCTTTCATAAATGTCTCAAACGAACCGAA
                      ____________________________________________________________
consensus GCCAAATTGTGTTGCCGCAGCAGCCTTGAACTCCTTCATAAATGTCTCAAACGAACCGAA
 
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rJMFF025D06- ATCTC-TATTGA
rJMFF006A21- ATCTC-TATTGATTAGCTCGAGAAGTTCACCTGATGGCTCCCCTCCCCCACCCGGTTTCA
JMFF006A21+ ATCTC-TATTGATTAGCTCGAGAAGTTCACCTGATGGCTCCCCTCCCCCACCCGGTTTCA
JMFF025D06+ ATCTCTTATTGATTAGCTCGAGAAGTTCACCTGATGGCTCCCCTCCCCCACCCGGTTTCA
JMFS106A10+ ATCTC-TATTGATTAGCTCGAGAAGTTCACCTGATGGCTCCCCTCCCCCACCCGGTTTCA
JMFF050B01+ ATCTC-TATTGATTAGCTCGAGAAGTTCACCTGATGGCTCCCCTCCCCCACCCGGTTTCA
                      ____________________________________________________________
consensus ATCTC-TATTGATTAGCTCGAGAAGTTCACCTGATGGCTCCCCTCCCCCACCCGGTTTCA
 
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rJMFF006A21- TAGACTCCCAGAAGAAAGTATGATTCCAAGCCTGTGCAGCATTGTTGAATGCAGGAAGAA
JMFF006A21+ TAGACTCCCAGAAGAAAGTATGATTCCAAGCCTGTGCAGCATTGTTGAATGCAGGAAGAA
JMFF025D06+ TAGACTCCCAGAAGAAAGTATGATTACAAGCCTGTGCAGCATTGTTGAATGCAGGAAGAA
JMFS106A10+ TAGACTCCCAGAAGAAAGTATGATTCCAAGCCTGTGCAGCATTGTTGAATGCAGGAAGAA
JMFF050B01+ TAGACTCCCAGAAGAAAGTATGATTCCAAGCCTGTGCAGCATTGTTGAATGCAGGAAGAA
                      ____________________________________________________________
consensus TAGACTCCCAGAAGAAAGTATGATTCCAAGCCTGTGCAGCATTGTTGAATGCAGGAAGAA
 
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rJMFF006A21- AATCACCATTGTTGTATGTGGCCAATACAATGTCTTCTAATGATACCCCATCCGGTTCGG
JMFF006A21+ AATCACCATTGTTGTATGTGGCCAATACAATGTCTTCTAATGATACCCCATCCGGTTCGG
JMFF025D06+ AATCACCATTGTTGTATGTGGCCAATACAATGTCTTCTAATGATACCCCATCCAGTTCGG
JMFS106A10+ AATCACCATTGTTGTATGTGGCCAATACAATGTCTTCTAATGATACCCCATCCAGTTCGG
JMFF050B01+ AATCACCATTGTTGTATGTGGCCAATACAATGTCTTCTAATGATACCCCATCAAGTTCGG
                      ____________________________________________________________
consensus AATCACCATTGTTGTATGTGGCCAATACAATGTCTTCTAATGATACCCCATCCGGTTCGG
 
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rJMFF006A21- TTCCTACGATCTGCTTG
JMFF006A21+ TTCCTACGATCTGCTTGTTTAAGTTGTCGACATAAGCCCTGTGATGTTTTCCCCAGTGGT
JMFF025D06+ TTCCTACGATCTGCTTGTTTAAGTTGTCGACATAAGCCCTGTGATGTTTTCCCCAGTGGT
JMFS106A10+ TTCCTACGATCTGCTTGTTTAAGTTGTCGACATAAGCCCTGTGATGTTTTCCCCAGTGGT
JMFF050B01+ TTCCTACGATCTGCTTGTTTAAGTTGTCGACATAAGCCCTGTGATGTTTTCCCCAGTGGT
                      ____________________________________________________________
consensus TTCCTACGATCTGCTTGTTTAAGTTGTCGACATAAGCCCTGTGATGTTTTCCCCAGTGGT
 
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JMFF006A21+ ATTCAAATGTTTGGCGACTCATATGAGGCTCCAGTGCATCCAGTGGATATGGTGGAGGCT
JMFF025D06+ ATTCAAATGTTTGGCGACTCATATGAGGCTCCAGTGCATCCAGTGGATATGGTGGAGGCT
JMFS106A10+ ATTCAAATGTTTGGCGACTCATATGAGGCTCCAGTGCATCCAGTGGATATGGTGGAGGCT
JMFF050B01+ ATTCAAATGTTTGGCGACTCATATGAGGCTCCAGTGCATCCAGTGGATATGGTGGAGGCT
                      ____________________________________________________________
consensus ATTCAAATGTTTGGCGACTCATATGAGGCTCCAGTGCATCCAGTGGATATGGTGGAGGCT
 
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JMFF006A21+ TTAGCTCAAGTGCTACTTTCTCCATCTTTCCAGATTCGAAGTTATGGCTTGAGCTCACCG
JMFF025D06+ TTAGCTCAAGTGCT
JMFS106A10+ TTAGCTCAAGTGCTACTTTCTCCATCTTTCCAGATTCGAAGTTATGGCTTGAGCTCACCG
JMFF050B01+ TTAGCTCAAGTGCTACTTTCTCCATCTTTCCAGATTCGAAGTTATGGCTTGAGCTCACCG
                      ____________________________________________________________
consensus TTAGCTCAAGTGCTACTTTCTCCATCTTTCCAGATTCGAAGTTATGGCTTGAGCTCACCG
 
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JMFF006A21+ GAAAAC
JMFS106A10+ GAAAAC
JMFF050B01+ GAAAACCTGCGAAACGGACAGAACCCATCAGCTATGCTGCATATATAATATTTCATTAAT
                      ____________________________________________________________
consensus GAAAACCTGCGAAACGGACAGAACCCATCAGCTATGCTGCATATATAATATTTCATTAAT
 
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JMFF050B01+ ACAGAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAGGAGACTTTGGCGAGAAAAG
                      ____________________________________________________________
consensus ACAGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAGGAGACTTTGGCGAGAAAAG
 
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JMFF050B01+ AAGGCAGACGAAAGAGAATTTGCAGAAACTGTAATCTGATGTTTGTCTTTGCGAATGAGT
                      ____________________________________________________________
consensus AAGGCAGACGAAAGAGAATTTGCAGAAACTGTAATCTGATGTTTGTCTTTGCGAATGAGT