| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF045D20 | Sequence | 579 | 007471 (6) | ref|XP_002534034.1| | 3e-80 | calcium ion binding protein, putative [Ricinus communis] gb|EEF28347.1| calcium | 626 | 007471 (6) | ref|XP_006359641.1| | 4e-61 | PREDICTED: uncharacterized protein LOC102580903 isoform X2 [Solanum tuberosum] |
| JMFS039F06 | Sequence | 591 | 007471 (6) | ref|XP_004230924.1| | 320 | PREDICTED: uncharacterized protein LOC101257023 [Solanum lycopersicum] | |||||
| JMSF015L13 | Sequence | 241 | 007471 (6) | gb|KJB32621.1| | 1e-43 | hypothetical protein B456_005G251800 [Gossypium raimondii] | |||||
| JMSF045M11 | Sequence | 724 | 007471 (6) | ref|NP_001275239.1| | 3e-115 | uncharacterized LOC102580903 [Solanum tuberosum] emb|CAA04670.1| 39 kDa EF-Hand | 770 | 007471 (6) | ref|XP_009799359.1| | 238 | PREDICTED: uncharacterized protein LOC104245449 [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
rJMSF045M11- GTTCGTGGTGGACAGATATGGAT
____________________________________________________________
consensus GTTCGTGGTGGACAGATATGGAT
. : . : . : . : . : . :
rJMFF045D20- TTGCACAG
rJMSF045M11- CCAAAGATCAATGATTAGATCTGGTCCATTAAAAACTAAAGATCTCAGATAATTGCACAG
____________________________________________________________
consensus CCAAAGATCAATGATTAGATCTGGTCCATTAAAAACTAAAGATCTCAGATAATTGCACAG
. : . : . : . : . : . :
rJMFF045D20- TTGAACGTGATATCTTGACATATATATATAATTCGTTTTCTTGAAGTAGCAAATCAGATC
rJMSF045M11- TTGAACGTGATATCTTGACATATATATATAATTCGTTTTCTTGAAGTAGCAAATCAGATC
____________________________________________________________
consensus TTGAACGTGATATCTTGACATATATATATAATTCGTTTTCTTGAAGTAGCAAATCAGATC
. : . : . : . : . : . :
rJMFF045D20- ACTGATCATCCTCTATAGATGCAATACCCTATGGCGGCATTAGTAACTGATTAACTAACT
rJMSF045M11- ACTGATCATCCTCTATAGATGCAATACCCTATGGCGGCATTAGTAACTGATTAACTAACT
____________________________________________________________
consensus ACTGATCATCCTCTATAGATGCAATACCCTATGGCGGCATTAGTAACTGATTAACTAACT
. : . : . : . : . : . :
rJMFF045D20- GAGTCATCTTCTTTATGGACATTACGTTACAGTGTTATTCCGATTGATCCATACACGTGA
rJMSF045M11- GAGTCATCTTCTTTATGGACATTACGTTACAGTGTTATTCCGATTGATCCATACACGTGA
____________________________________________________________
consensus GAGTCATCTTCTTTATGGACATTACGTTACAGTGTTATTCCGATTGATCCATACACGTGA
. : . : . : . : . : . :
rJMFF045D20- ACTCAGAGTTTAAAGCAGTAAATTTAAGTACCCTTATGTTGAAGATGGGTCCAAGAGTGT
rJMSF045M11- ACTCAGAGTTTAAAGCAGTAAATTTAAGTACCCTTATGTTGAAGATGGGTCCAAGAGTGT
____________________________________________________________
consensus ACTCAGAGTTTAAAGCAGTAAATTTAAGTACCCTTATGTTGAAGATGGGTCCAAGAGTGT
. : . : . : . : . : . :
rJMFF045D20- GGATGCAGAAGCAAGGGGTTCGTGCACGACCGAGTTGGTGGAAACCGAAACAGGATTGCC
rJMSF045M11- GGATGCAGAAGCAAGGGGTTCGTGCACGACCGAGTTGGTGGAAACCGAAACAGGATTGCC
____________________________________________________________
consensus GGATGCAGAAGCAAGGGGTTCGTGCACGACCGAGTTGGTGGAAACCGAAACAGGATTGCC
. : . : . : . : . : . :
rJMFF045D20- TTCTATCTGCAGCATTATTGCTCCTAGTACCTCTGTCAACACTTTCTTCAATTCATCCTC
rJMSF045M11- TTCTATCTGCAGCATTATTGCTCCTAGTACCTCTGTCAACACTTTCTTCAATTCATCCTC
____________________________________________________________
consensus TTCTATCTGCAGCATTATTGCTCCTAGTACCTCTGTCAACACTTTCTTCAATTCATCCTC
. : . : . : . : . : . :
rJMFF045D20- TTTAACCATTTTCCCATCATCAGCATCCACCATCTTCAATGCTTCATTAGTTATCTTGTC
rJMSF045M11- TTTAACCATTTTCCCATCATCAGCATCCACCATCTTCAATGCTTCATTAGTTATCTTGTC
____________________________________________________________
consensus TTTAACCATTTTCCCATCATCAGCATCCACCATCTTCAATGCTTCATTAGTTATCTTGTC
. : . : . : . : . : . :
rJMFF045D20- CATCTCATCAACTGCGCCAATGGGAGGTAAGCCAGCCGATGGAGCCAGTACATCAAGTGC
rJMSF045M11- CATCTCATCAACTGCGCCAATGGGAGGTAAGCCAGCCGATGGAGCCAGTACATCAAGTGC
JMFS039F06+ TAAGCCAGCCGATGGAGCCAGTACATCAAGTGC
JMSF045M11+ TAAGCCAGCCGATGGAGCCAGTACATCAAGTGC
____________________________________________________________
consensus CATCTCATCAACTGCGCCAATGGGAGGTAAGCCAGCCGATGGAGCCAGTACATCAAGTGC
. : . : . : . : . : . :
rJMFF045D20- CACACGAAGGTATTCCTTGGATATTTTCCCATGACGATCTCTGGGAACATTTTTAACAGC
rJMSF045M11- CACACGAAGGTATTCCTTGGATATTTTCCCATGACGATCTCTGGGAACATTTTTAACAGC
JMFS039F06+ CACACGAAGGTATTCCTTGGATATTTTCCCATGACGATCTCTGGGAACATTTTTAACAGC
JMSF045M11+ CACACGAAGGTATTCCTTGGATATTTTCCCATGACGATCTCTGGGAACATTTTTAACAGC
____________________________________________________________
consensus CACACGAAGGTATTCCTTGGATATTTTCCCATGACGATCTCTGGGAACATTTTTAACAGC
. : . : . : . : . : . :
rJMFF045D20- AGAATCCAGAGTCTTATCTAGTTCAAATTTGTTGGCCAA
rJMSF045M11- AGAATCCAGAGTCTTATCTAGTTCAAATTTGTTGGCCAATAATCTCCTAATGCCACTTCC
JMFS039F06+ AGAATCCAGAGTCTTATCTAGTTCAAATTTGTTGGCCAATAATCTCCTAATGCCACTTCC
JMSF045M11+ AGAATCCAGAGTCTTATCTAGTTCAAATTTGTTGGCCAATAATCTCCTAATGCCACTTCC
____________________________________________________________
consensus AGAATCCAGAGTCTTATCTAGTTCAAATTTGTTGGCCAATAATCTCCTAATGCCACTTCC
. : . : . : . : . : . :
rJMSF045M11- ATCAAAGGTGTTCTCACTATGAGCAAACAATTACAGGTTGTTCCTTAAGACGCTGAGCCA
JMFS039F06+ ATCAAAGGTGTTCTCACTATGAGC-AACAATTACAGGTTGTTCCTTAAGACGCTGAGCCA
JMSF045M11+ ATCAAAGGTGTTCTCACTATGAGC-AACAATTACAGGTTGTTCCTTAAGACGCTGAGCCA
____________________________________________________________
consensus ATCAAAGGTGTTCTCACTATGAGC-AACAATTACAGGTTGTTCCTTAAGACGCTGAGCCA
. : . : . : . : . : . :
rJMSF045M11- CTCTCACAGCAACTTTCTTGAACTC
JMFS039F06+ CTCTCACAGCAACTTTCTTGAACTCAGCCAGAAATGAGTCTTGCGAAACTGGTTCCTGCT
JMSF045M11+ CTCTCACAGCAACTTTCTTGAACTCAGCCAGAAATGAGTCTTGCGAAACTGGTTCCTGCT
____________________________________________________________
consensus CTCTCACAGCAACTTTCTTGAACTCAGCCAGAAATGAGTCTTGCGAAACTGGTTCCTGCT
. : . : . : . : . : . :
JMFS039F06+ GAATACCAGTGTCAGATGATCCCAGTGCCGGTTCCACAATGTTGCTCATTACCCAAGAAT
JMSF045M11+ GAATACCAGTGTCAGATGATCCCAGTGCCGGTTCCACAATGTTGCTCATTACCCAAGAAT
____________________________________________________________
consensus GAATACCAGTGTCAGATGATCCCAGTGCCGGTTCCACAATGTTGCTCATTACCCAAGAAT
. : . : . : . : . : . :
JMFS039F06+ CTGAGGCAGGAGGCATCCCTTGATCCACTGTAAGCTTCTCAAAGACCTTGAGAATGTAAT
JMSF045M11+ CTGAGGCAGGAGGCATCCCTTGATCCACTGTAAGCTTCTCAAAGACCTTGAGAATGTAAT
____________________________________________________________
consensus CTGAGGCAGGAGGCATCCCTTGATCCACTGTAAGCTTCTCAAAGACCTTGAGAATGTAAT
. : . : . : . : . : . :
JMFS039F06+ CTTTCAGGGATCCATCATTATCAGGCAATTCTATCACAGAACATATCGAAACCATGTCCG
JMSF045M11+ CTTTCAGGGATCCATCATTATCAGGCAATTCTATCACAGAACATATCGAAACCATGTCCG
JMFF045D20+ CAGGCAATTCTATCACAGAACATATCGAAACCATGTCCG
____________________________________________________________
consensus CTTTCAGGGATCCATCATTATCAGGCAATTCTATCACAGAACATATCGAAACCATGTCCG
. : . : . : . : . : . :
JMFS039F06+ ACTCAAAACTTGGACTATTAATAAACTCTAGCAGGTCATCACCATCCATGCGAAGAATTA
JMSF045M11+ ACTCAAAACTTGGACTATTAATAAACTCTAGCAGGTCATCACCATCCATGCGAAGAATTA
JMSF015L13+ TAGCAGGTCATCACCATCCATGCGAAGAATTA
JMFF045D20+ ACTCAAAACTTGGACTATTAATAAACTCTAGCAGGTCATCACCATCCATGCGAAGAATTA
____________________________________________________________
consensus ACTCAAAACTTGGACTATTAATAAACTCTAGCAGGTCATCACCATCCATGCGAAGAATTA
. : . : . : . : . : . :
JMFS039F06+ CAATAGGGTCCCGCTTTAAACCAGTAGCCATGCCTAGTAGAATATCCGAGAGAACCTCTT
JMSF045M11+ CAATAGGGTCCCGCTTTAAACCAGTAGCCATGCCTAGTAGAATATCCGAGAGAACCTCTT
JMSF015L13+ CAATAGGGTCCCGCTTTAAACCAGTAGCCATGCCTAGTAGAATATCCGAGAGAACCTCTT
JMFF045D20+ CAATAGGGTCCCGCTTTAAACCAGTAGCCATGCCTAGTAGAATATCCGAGAGAACCTCTT
____________________________________________________________
consensus CAATAGGGTCCCGCTTTAAACCAGTAGCCATGCCTAGTAGAATATCCGAGAGAACCTCTT
. : . : . : . : . : . :
JMFS039F06+ TAAACTCTGTCTTGCTTAC
JMSF045M11+ TAAACTCTGTCTTGCTTACCTTCTCTTGTTTTCCATGAGTGAATTCATTAAGCACCT
JMSF015L13+ TAAACTCTGTCTTGCTTACCTTCTCTTGTTTTCCATGAGTGAATTCATTAAGCACCT
JMFF045D20+ TAAACTCTGTCTTGCTTACCTTCTCTTGTTTTCCATGAGTGAATTCATTAAGCACCTCAG
____________________________________________________________
consensus TAAACTCTGTCTTGCTTACCTTCTCTTGTTTTCCATGAGTGAATTCATTAAGCACCTCAG
. : . : . : . : . : . :
JMFF045D20+ AGTAGATATGATCGGACTTGGGAGAAGAGCCTTGAGCCGGCAAGCCGAGAGCAGCGCCAA
____________________________________________________________
consensus AGTAGATATGATCGGACTTGGGAGAAGAGCCTTGAGCCGGCAAGCCGAGAGCAGCGCCAA
. : . : . : . : . : . :
JMFF045D20+ TGTCGGCGACGGCGGGTTGCAATTCCTTAACAGAGAGCTTGCCGTCACAGTCTTTGTCCA
____________________________________________________________
consensus TGTCGGCGACGGCGGGTTGCAATTCCTTAACAGAGAGCTTGCCGTCACAGTCTTTGTCCA
. : . : . : . : . : . :
JMFF045D20+ GTTCTTGAAACTTGTGATCCACGAAGTTACTGAACACCTCCTCATTCCCAACCAACTCCA
____________________________________________________________
consensus GTTCTTGAAACTTGTGATCCACGAAGTTACTGAACACCTCCTCATTCCCAACCAACTCCA
. : . : . : . : . : . :
JMFF045D20+ TTATATCCGATCCGTCCAACACCTCTCCCTCACAACTTTTCTTCTTCATCTTCACAGTAT
____________________________________________________________
consensus TTATATCCGATCCGTCCAACACCTCTCCCTCACAACTTTTCTTCTTCATCTTCACAGTAT
. : . : . : . : . : . :
JMFF045D20+ TCACACTCCGATTCTTTATCTCTCTCTCTCTCTCTGTGTTCCCCCAACTTCCCGTGACTG
____________________________________________________________
consensus TCACACTCCGATTCTTTATCTCTCTCTCTCTCTCTGTGTTCCCCCAACTTCCCGTGACTG
. : . : . : . : . : . :
JMFF045D20+ TTCCCTTTTCTTCGCTGGCCGCTCCAAAAGCATCAACGCTTACGAGTAATGGCGAAGTGT
____________________________________________________________
consensus TTCCCTTTTCTTCGCTGGCCGCTCCAAAAGCATCAACGCTTACGAGTAATGGCGAAGTGT