Contig 007461:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF042J11Sequence633007461 (2)ref|XP_010249629.1|2e-77PREDICTED: casein kinase I-like [Nelumbo nucifera]561011155 (2)
JMFS037C12Sequence627007461 (2)ref|XP_010249629.1|2e-87PREDICTED: casein kinase I-like [Nelumbo nucifera]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS037C12+ AATCAATGACGTAGACCTGATTGCCT
                      ____________________________________________________________
consensus AATCAATGACGTAGACCTGATTGCCT
 
. : . : . : . : . : . :
JMFS037C12+ TCCTTCCAAGGCCCATGAGAAAGTTATCTGGTTTGATGTCTCTGTGCAAAAATCCCTTTG
JMFF042J11+ CTGGTNTGATGTCTCTGTGCAAAAATCCCTTTG
                      ____________________________________________________________
consensus TCCTTCCAAGGCCCATGAGAAAGTTATCTGGTTTGATGTCTCTGTGCAAAAATCCCTTTG
 
. : . : . : . : . : . :
JMFS037C12+ AATGTAAATACTCTATTCTGGTAATCATCTGATCAGCCAACATAAGAACAGTTTTTAGAG
JMFF042J11+ AATGTAAATACTCTATTCTGGTAATCATCTGATCAGCCAACATAAGAACAGTTTTTAGAG
                      ____________________________________________________________
consensus AATGTAAATACTCTATTCTGGTAATCATCTGATCAGCCAACATAAGAACAGTTTTTAGAG
 
. : . : . : . : . : . :
JMFS037C12+ AGAATTTCCTCCCACAGTACACAAAAAGGTCTTCAAGACTGGGTCCAAGCAAATCGATAA
JMFF042J11+ AGAATTTCCTCCCACAGTACACAAAAAGGTCTTCAAGACTGGGTCCAAGCAAATCGATAA
                      ____________________________________________________________
consensus AGAATTTCCTCCCACAGTACACAAAAAGGTCTTCAAGACTGGGTCCAAGCAAATCGATAA
 
. : . : . : . : . : . :
JMFS037C12+ CAAGGACATTATCATTTCCATCAACCCCACACCATTTTATGTTAGGAATTCCACCTCCTC
JMFF042J11+ CAAGGACATTATCATTTCCATCAACCCCACACCATTTTATGTTAGGAATTCCACCTCCTC
                      ____________________________________________________________
consensus CAAGGACATTATCATTTCCATCAACCCCACACCATTTTATGTTAGGAATTCCACCTCCTC
 
. : . : . : . : . : . :
JMFS037C12+ CCTGAAGTATATTATACAGCTTAGCCTCGTAAAGCAACTGGGGATGATTAGTCTGCCTAT
JMFF042J11+ CCTGAAGTATATTATACAGCTTAGCCTCGTAAAGCAACTGGGGATGATTAGTCTGCCTAT
                      ____________________________________________________________
consensus CCTGAAGTATATTATACAGCTTAGCCTCGTAAAGCAACTGGGGATGATTAGTCTGCCTAT
 
. : . : . : . : . : . :
JMFS037C12+ TTTCCATCTTAACAGCAACGATCTCAAAGGTATCGATATGAGTAGCCAGATGGATTTCTC
JMFF042J11+ TTTCCATCTTAACAGCAACGATCTCAAAGGTATCGATATGAGTAGCCAGATGGATTTCTC
                      ____________________________________________________________
consensus TTTCCATCTTAACAGCAACGATCTCAAAGGTATCGATATGAGTAGCCAGATGGATTTCTC
 
. : . : . : . : . : . :
JMFS037C12+ CAAAGGAACCGCTCCCGATCTTCCGACCCAGCTTATACTTGTCGCCAACTATTCTCTCCA
JMFF042J11+ CAAAGGAACCGCTCCCGATCTTCCGACCCAGCTTATACTTGTCGCCAACTATTCTCTCCA
                      ____________________________________________________________
consensus CAAAGGAACCGCTCCCGATCTTCCGACCCAGCTTATACTTGTCGCCAACTATTCTCTCCA
 
. : . : . : . : . : . :
JMFS037C12+ TCTGCGCATATAGATGTGCGTATATACGCAGATACGCGGGTGTGTATGTATATATGTGCG
JMFF042J11+ TCTGCGCATATAGATGTGCGTATATACGCAGATACGCGGGTGTGTATGTATATATGTGCG
                      ____________________________________________________________
consensus TCTGCGCATATAGATGTGCGTATATACGCAGATACGCGGGTGTGTATGTATATATGTGCG
 
. : . : . : . : . : . :
JMFS037C12+ GGTGTATAGCAGAAGACGCAGAGATGGATTCGATTAACTATTGAGATTGAATAGCAACTA
JMFF042J11+ GGTGTATAGAAGAAGACGCAGAGATGGATTCGATTAACTATTGAGATTGAATAGCAACTA
                      ____________________________________________________________
consensus GGTGTATAGCAGAAGACGCAGAGATGGATTCGATTAACTATTGAGATTGAATAGCAACTA
 
. : . : . : . : . : . :
JMFS037C12+ GAGACCTAGGGTTAGTGAAAGTTTTCAGCTTTCTGCCTGAAATTTCCACGAGAGAGACAA
JMFF042J11+ GAGACCTAGGGTTAGTGAAAGTTTTCAGCTTTCTGCCTGAAATTTCCACGAGAGAGACAA
                      ____________________________________________________________
consensus GAGACCTAGGGTTAGTGAAAGTTTTCAGCTTTCTGCCTGAAATTTCCACGAGAGAGACAA
 
. : . : . : . : . : . :
JMFS037C12+ A
JMFF042J11+ AGAGGACTAAAAAAATAAAATAATACAGCGTCGGGAAGACGAAATCACGAAATTATGGAC
                      ____________________________________________________________
consensus AGAGGACTAAAAAAATAAAATAATACAGCGTCGGGAAGACGAAATCACGAAATTATGGAC