Contig 007460:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF042H21Sequence508007460 (2)
JMSF046B02Sequence756007098 (12)ref|XP_009601394.1|4e-74PREDICTED: uncharacterized protein LOC104096687 isoform X2 [Nicotiana tomentosi647007460 (2)ref|XP_010313708.1|6e-29PREDICTED: heme-binding-like protein At3g10130, chloroplastic isoform X2 [Solan

Alignment

This contig is upended


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rJMSF046B02+ TCAGATGA
                      ____________________________________________________________
consensus TCAGATGA
 
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rJMSF046B02+ TCAAAAATCCCAAAGTCTCGATCCAGATNGNTCTTCCATCAACTAAATCTTNGGACAGTT
                      ____________________________________________________________
consensus TCAAAAATCCCAAAGTCTCGATCCAGATNGNTCTTCCATCAACTAAATCTTNGGACAGTT
 
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rJMSF046B02+ TACCAACCCCGAATGANGAAGGATTAAAATTGAGGAAAGTTGAAGGAGGCATTGNNGCAG
                      ____________________________________________________________
consensus TACCAACCCCGAATGANGAAGGATTAAAATTGAGGAAAGTTGAAGGAGGCATTGNNGCAG
 
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rJMSF046B02+ TGACCAAANTCAGCGGGAANCCAACAGAGAACATTGTTCTTGAGAAGGAGAAAGAGCTGA
                      ____________________________________________________________
consensus TGACCAAANTCAGCGGGAANCCAACAGAGAACATTGTTCTTGAGAAGGAGAAAGAGCTGA
 
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rJMSF046B02+ GGTCTAGTCTTATTAGAAANGGCCTCGAACGTAAACCGGGGTGCCTGCTTGCTCGCTACA
                      ____________________________________________________________
consensus GGTCTAGTCTTATTAGAAANGGCCTCGAACGTAAACCGGGGTGCCTGCTTGCTCGCTACA
 
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rJMSF046B02+ ATGATCCTGATAAAACTTGGGAACACATAATGGTATCCACTCCCATCCTCACTTGTTTTA
JMFF042H21- GTATGCACTCCCATCCTCACTTGTTTTA
                      ____________________________________________________________
consensus ATGATCCTGATAAAACTTGGGAACACATAATGGTATGCACTCCCATCCTCACTTGTTTTA
 
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rJMSF046B02+ GAATTGAAATACCCACACACTATTTCCATTTCATTACTTGATGGAATTTCGGGGGTCTAT
JMFF042H21- GAATTGAAATACCCACACACTATTTCCATTTCATTACTTGATGGAATTTCGGGGGTCTAT
                      ____________________________________________________________
consensus GAATTGAAATACCCACACACTATTTCCATTTCATTACTTGATGGAATTTCGGGGGTCTAT
 
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rJMSF046B02+ GACNTCAATTTCTTAAGATCACAACCATTCCCGACATATTCCAAATGTGCACTATTAACA
JMFF042H21- GACCTCAATTTCTTAAGATCACAACCATTCCCGACATATTCCAAATGTGCACTATTAACA
                      ____________________________________________________________
consensus GACCTCAATTTCTTAAGATCACAACCATTCCCGACATATTCCAAATGTGCACTATTAACA
 
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rJMSF046B02+ CGGTAACACCCCNTCAGCTACATCTCTAGAATGCATGTTAAGCATAATATATATGCAGTC
JMFF042H21- CGGTAACACCCCTTAAGCTACATCTCTAGAATGCATGTTAAGCATAATATATATGCAGTC
                      ____________________________________________________________
consensus CGGTAACACCCCTTCAGCTACATCTCTAGAATGCATGTTAAGCATAATATATATGCAGTC
 
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rJMSF046B02+ TCGCTATTAGTTTAATCTTGTAGTTGAGGCGAACACATCCTTCAATTACGCNAGATCTCT
JMFF042H21- TCGCTATTAGTTTAATCTTGTAGTTGAGGCGAACACATCCTTCAATTACGCTAGATCTCT
                      ____________________________________________________________
consensus TCGCTATTAGTTTAATCTTGTAGTTGAGGCGAACACATCCTTCAATTACGCTAGATCTCT
 
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rJMSF046B02+ ATCTAATGATGTGAGGACTCGAGTGTTTGTGTTTTTCACCCACGCTTTTTGCTNGGCTCT
JMFF042H21- ATCTAATGATGTGAGGACTCGAGTGTTTGTGTTTTTCACCCACGCTTTTTGCTTGGCTCT
                      ____________________________________________________________
consensus ATCTAATGATGTGAGGACTCGAGTGTTTGTGTTTTTCACCCACGCTTTTTGCTTGGCTCT
 
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rJMSF046B02+ ATTTNGNGTATGCTA
JMFF042H21- ATTTTGCGTATGCTAGCAATGATCCCTTCATCTCTATCTCCTACCTGATTTCATTTACTG
                      ____________________________________________________________
consensus ATTTTGCGTATGCTAGCAATGATCCCTTCATCTCTATCTCCTACCTGATTTCATTTACTG
 
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JMFF042H21- TGATGATTGAAGAGAAATGAAGTGCTTATATGGCTGGAGGAATTCTCACTGGATTGATGC
                      ____________________________________________________________
consensus TGATGATTGAAGAGAAATGAAGTGCTTATATGGCTGGAGGAATTCTCACTGGATTGATGC
 
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JMFF042H21- TTTGGCAATTTTGGTACCTGGAGTAGAGGAGCAGTAGCACATATTTTTCGTATAGGCAGC
                      ____________________________________________________________
consensus TTTGGCAATTTTGGTACCTGGAGTAGAGGAGCAGTAGCACATATTTTTCGTATAGGCAGC