Contig 007436:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF036O15Sequence544007436 (2)ref|XP_009613221.1|1e-42PREDICTED: F-box protein CPR30-like [Nicotiana tomentosiformis]723007436 (2)ref|XP_009613221.1|3e-78PREDICTED: F-box protein CPR30-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF036O15- TTATATTATATGCAAAATTATATTCTTACACTTCTCACTTTTGAGC
                      ____________________________________________________________
consensus TTATATTATATGCAAAATTATATTCTTACACTTCTCACTTTTGAGC
 
. : . : . : . : . : . :
rJMFF036O15- AACTAGATTCTTGATTGAAACTAAGCTCTCCTTGAATACAGAAGCCTGCAGAGAATATCC
                      ____________________________________________________________
consensus AACTAGATTCTTGATTGAAACTAAGCTCTCCTTGAATACAGAAGCCTGCAGAGAATATCC
 
. : . : . : . : . : . :
rJMFF036O15- TTTTCTCCTAGGTCCAAGAGCCCTGATTTCTTTGCTCCTAGGATCATACATGTGCAGTTC
                      ____________________________________________________________
consensus TTTTCTCCTAGGTCCAAGAGCCCTGATTTCTTTGCTCCTAGGATCATACATGTGCAGTTC
 
. : . : . : . : . : . :
rJMFF036O15- CGAATTCACAATTTCTAACAAAACTTCACCATTTTTCCCATATCCCAGCGGCCTCTTGAT
                      ____________________________________________________________
consensus CGAATTCACAATTTCTAACAAAACTTCACCATTTTTCCCATATCCCAGCGGCCTCTTGAT
 
. : . : . : . : . : . :
rJMFF036O15- ATTCAAAAAGGGTCCAAGACTCGCCATTTTGGTCCAACACATTGCCCTATCCATAACCCA
                      ____________________________________________________________
consensus ATTCAAAAAGGGTCCAAGACTCGCCATTTTGGTCCAACACATTGCCCTATCCATAACCCA
 
. : . : . : . : . : . :
rJMFF036O15- TACATCAATGCTTGTCTGCATATTCATCGATTCATACAGAAACATAGCAACAGAATCATT
                      ____________________________________________________________
consensus TACATCAATGCTTGTCTGCATATTCATCGATTCATACAGAAACATAGCAACAGAATCATT
 
. : . : . : . : . : . :
rJMFF036O15- GTACAAAGCCAAATCTCCCTGCGTGGATTTGAATGTTTCTGGTGTTTGGATCTCCCGAAA
                      ____________________________________________________________
consensus GTACAAAGCCAAATCTCCCTGCGTGGATTTGAATGTTTCTGGTGTTTGGATCTCCCGAAA
 
. : . : . : . : . : . :
rJMFF036O15- AACCTCATTTCCCATGTCGAATGAAACGACCTTCCCATTGTTGTTTGCTCTCCAGTAGTA
                      ____________________________________________________________
consensus AACCTCATTTCCCATGTCGAATGAAACGACCTTCCCATTGTTGTTTGCTCTCCAGTAGTA
 
. : . : . : . : . : . :
rJMFF036O15- AAAACCATCCAAGTATGCGTTACAGCAAGATTTACCCAGTATGCGGCTGCAGATATGAAG
                      ____________________________________________________________
consensus AAAACCATCCAAGTATGCGTTACAGCAAGATTTACCCAGTATGCGGCTGCAGATATGAAG
 
. : . : . : . : . : . :
rJMFF036O15- TTCTTCAAAGTGTTTCCAGGAATCAGTGGTGAGTGTATAAACTGAGATAATCGCAGGTGA
                      ____________________________________________________________
consensus TTCTTCAAAGTGTTTCCAGGAATCAGTGGTGAGTGTATAAACTGAGATAATCGCAGGTGA
 
. : . : . : . : . : . :
rJMFF036O15- ATGCCAAGCATCCGCGATTGGATCCCAATAGTCTCTTATCCAAACAACTTTATAATTGCC
JMFF036O15+ TGCC
                      ____________________________________________________________
consensus ATGCCAAGCATCCGCGATTGGATCCCAATAGTCTCTTATCCAAACAACTTTATAATTGCC
 
. : . : . : . : . : . :
rJMFF036O15- GTTTGATGGGTCCATCCCAAATCCTAGTTTATACGAATTCATACGAAACGAGGCAGAAAC
JMFF036O15+ GTTTGATGGGTCCATCCCAAATCCTAGTTTATACGAATTCATACGAAACGAGGCAGAAAC
                      ____________________________________________________________
consensus GTTTGATGGGTCCATCCCAAATCCTAGTTTATACGAATTCATACGAAACGAGGCAGAAAC
 
. : . : . : . : . : . :
rJMFF036O15- TTCTGGGTATGAAACTG
JMFF036O15+ TTCTGGGTATGAAACTGGGAGAGACTTGGCCTCCCTAGTAGCAGGGTTCCAAAGAGTCAC
                      ____________________________________________________________
consensus TTCTGGGTATGAAACTGGGAGAGACTTGGCCTCCCTAGTAGCAGGGTTCCAAAGAGTCAC
 
. : . : . : . : . : . :
JMFF036O15+ CTGTTCTTGATCATTGTACAGAGAAAACAGCCCGTTTAGCGGGCCGTTTATTTCCCACAC
                      ____________________________________________________________
consensus CTGTTCTTGATCATTGTACAGAGAAAACAGCCCGTTTAGCGGGCCGTTTATTTCCCACAC
 
. : . : . : . : . : . :
JMFF036O15+ GGAAACCGAAGTGTTGGTGTAATCTTGGTAGGAATGGGAGGCGAGAACTTGGGTTTCTTC
                      ____________________________________________________________
consensus GGAAACCGAAGTGTTGGTGTAATCTTGGTAGGAATGGGAGGCGAGAACTTGGGTTTCTTC
 
. : . : . : . : . : . :
JMFF036O15+ ATCGAACAATGAAAACCCAGATTCCATGGCGTCGAGCGAGTAATGGTGAACGAAGGAGAG
                      ____________________________________________________________
consensus ATCGAACAATGAAAACCCAGATTCCATGGCGTCGAGCGAGTAATGGTGAACGAAGGAGAG
 
. : . : . : . : . : . :
JMFF036O15+ TGCGGGGTTGGTGGGATGGTGGTGGTGCTTTGCGACGAAATTTGGGGTTTGAATGAGAGG
                      ____________________________________________________________
consensus TGCGGGGTTGGTGGGATGGTGGTGGTGCTTTGCGACGAAATTTGGGGTTTGAATGAGAGG
 
. : . : . : . : . : . :
JMFF036O15+ CGCCAGTTCTTGCGCAGCGATTTGCACTGCAGAAGGGACTTGGCAGGCAGCCTTGATAAG
                      ____________________________________________________________
consensus CGCCAGTTCTTGCGCAGCGATTTGCACTGCAGAAGGGACTTGGCAGGCAGCCTTGATAAG
 
. : . : . : . : . : . :
JMFF036O15+ ATCTCCGCTACCACATCCTCCGGCAAATGCTCAAACTTTGTCTCTTCTGCAGTCATTCTG
                      ____________________________________________________________
consensus ATCTCCGCTACCACATCCTCCGGCAAATGCTCAAACTTTGTCTCTTCTGCAGTCATTCTG
 
. : . : . : . : . : . :
JMFF036O15+ ATCTGCTTCTTTGATCTTCTCAAGATCTGAGAGACTGAGGGTTTGTGGTCAGAGAAAAAT
                      ____________________________________________________________
consensus ATCTGCTTCTTTGATCTTCTCAAGATCTGAGAGACTGAGGGTTTGTGGTCAGAGAAAAAT