Contig 007428:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005D10Sequence502007428 (7)ref|XP_009339426.1|8e-05PREDICTED: amino acid permease 3-like [Pyrus x bretschneideri] ref|XP_009339427.720012473 (8)ref|XP_010322323.1|1e-82PREDICTED: amino acid transporter isoform X1 [Solanum lycopersicum]
JMFF017F02Sequence533007428 (7)ref|XP_009801366.1|1e-10PREDICTED: amino acid permease 3-like [Nicotiana sylvestris]690012473 (8)ref|XP_010322323.1|5e-80PREDICTED: amino acid transporter isoform X1 [Solanum lycopersicum]
JMFF031M21Sequence545007428 (7)ref|XP_009609434.1|1e-13PREDICTED: amino acid permease 3-like [Nicotiana tomentosiformis]654012473 (8)ref|XP_010322323.1|9e-61PREDICTED: amino acid transporter isoform X1 [Solanum lycopersicum]
JMFF031O18Sequence542007428 (7)ref|XP_009609434.1|1e-13PREDICTED: amino acid permease 3-like [Nicotiana tomentosiformis]716012473 (8)ref|XP_010322323.1|6e-77PREDICTED: amino acid transporter isoform X1 [Solanum lycopersicum]
JMFF034P16Sequence453007428 (7)217012473 (8)
JMFF039K07Sequence478007428 (7)617012473 (8)ref|XP_010322323.1|1e-74PREDICTED: amino acid transporter isoform X1 [Solanum lycopersicum]
JMFF049J17Sequence635007428 (7)ref|XP_009801366.1|4e-32PREDICTED: amino acid permease 3-like [Nicotiana sylvestris]581012473 (8)ref|XP_009379863.1|3e-43PREDICTED: amino acid permease 4-like [Musa acuminata subsp. malaccensis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF049J17+ ACGATAGAGAACAAGATCATCATAGTTGGACCAGCAA
                      ____________________________________________________________
consensus ACGATAGAGAACAAGATCATCATAGTTGGACCAGCAA
 
. : . : . : . : . : . :
JMFF049J17+ TCCATCCCAACTGTGCCACGGCCCATGCTAAGGACAAAACTCCCGAACCTATAACAGCCG
JMFF031M21+ CAGCCG
JMFF031O18+ CAGCCG
                      ____________________________________________________________
consensus TCCATCCCAACTGTGCCACGGCCCATGCTAAGGACAAAACTCCCGAACCTATAACAGCCG
 
. : . : . : . : . : . :
JMFF049J17+ TTATTATGTGTGCACTAGCCGTCCAAACACTCCCAGTTCTCTTGAGACGGCCGTCGTCGT
JMFF017F02+ TATGTGTGCACTAGCCGTCCAAACACTCCCAGTTCTCTTGAGACGGCCGTCGTCGT
JMFF031M21+ TTATTATGTGTGCACTAGCCGTCCAAACACTCCCAGTTCTCTTGAGACGGCCGTCGTCGT
JMFF031O18+ TTATTATGTGTGCACTAGCCGTCCAAACACTCCCAGTTCTCTTGAGACGGCCGTCGTCGT
JMFF039K07+ GT
JMFF005D10+ TCTCTTGAGACGGCCGTCGTCGT
                      ____________________________________________________________
consensus TTATTATGTGTGCACTAGCCGTCCAAACACTCCCAGTTCTCTTGAGACGGCCGTCGTCGT
 
. : . : . : . : . : . :
JMFF049J17+ CGAAGCATTTGGAGTCGCCGGCGCGCGACTGAGCGTCGACGTTGATCGAGAAATCGAGCA
JMFF017F02+ CGAAGCATTTGGAGTCGCCGGCGCGCGACTGAGCGTCGACGTTNATCGAGAAATCGAGCA
JMFF031M21+ CGAAGCATTTGGAGTCGCCGGCGCGCGACTGAGCGTCGACGTTGATCGAGAAATCGAGCA
JMFF031O18+ CGAAGCATTTGGAGTCGCCGGCGCGCGACTGAGCGTCGACGTTGATCGAGAAATCGAGCA
JMFF039K07+ CGAAGCATTTGGAGTCGCCGGCGCGCGACTGAGCGTCGACGTTGATCGAGAAATCGAGCA
JMFF005D10+ CGAAGCATTTGGAGTCGCCGGCGCGCGACTGAGCGTCGACGTTGATCGAGAAATCGAGCA
JMFF034P16+ ACTGAGCGTCGACGTTGATCGAGAAATCGAGCA
                      ____________________________________________________________
consensus CGAAGCATTTGGAGTCGCCGGCGCGCGACTGAGCGTCGACGTTGATCGAGAAATCGAGCA
 
. : . : . : . : . : . :
JMFF049J17+ CTTGCCGGTGATAATTCTGGTGCTTGGCCGCCGCCGACGAGTTATCTCCCATCTTCAATT
JMFF017F02+ CTTGCCGGTGATAATTCTGGTGCTTGGCCGCCGCCGACGAGTTNTCTCCCATCTTCAATT
JMFF031M21+ CTTGCCGGTGATAATTCTGGTGCTTGGCCGCCGCCGACGAGTTATCTCCCATCTTCAATT
JMFF031O18+ CTTGCCGGTGATAATTCTGGTGCTTGGCCGCCGCCGACGAGTTATCTCCCATCTTCAATT
JMFF039K07+ CTTGCCGGTGATAATTCTGGTGCTTGGCCGCCGCCGACGAGTTATCTCCCATCTTCAATT
JMFF005D10+ CTTGCCGGTGATAATTCTGGTGCTTGGCCGCCGCCGACGAGTTATCTCCCATCTTCAATT
JMFF034P16+ CTTGCCGGTGATAATTCTGGTGCTTGGCCGCCGCCGACGAGTTATCTCCCATCTTCAATT
                      ____________________________________________________________
consensus CTTGCCGGTGATAATTCTGGTGCTTGGCCGCCGCCGACGAGTTATCTCCCATCTTCAATT
 
. : . : . : . : . : . :
JMFF049J17+ TCCAGAAAGAAGAAACAGGAGAATAAGTAGAAATACTTGATCGAGCTCAGGAGTCAGGAG
JMFF017F02+ TCCAGAAAGAAGAAACAGGAGAATAAGTAGAAATACTTGATCGAGCTCAGGAGTCAGGAG
JMFF031M21+ TCCAGAAAGAAGAAACAGGAGAATAAGTAGAAATACTTGATCGAGCTCAGGAGTCAGGAG
JMFF031O18+ TCCAGAAAGAAGAAACAGGAGAATAAGTAGAAATACTTGATCGAGCTCAGGAGTCAGGAG
JMFF039K07+ TCCAGAAAGAAGAAACAGGAGAATAAGTAGAAATACTTGATCGAGCTCAGGAGTCAGGAG
JMFF005D10+ TCCAGAAAGAAGAAACAGGAGAATAAGTAGAAATACTTGATCGAGCTCAGGAGTCAGGAG
JMFF034P16+ TCCAGAAAGAAGAAACAGGAGAATAAGTAGAAATACTTGATCGAGCTCAGGAGTCAGGAG
                      ____________________________________________________________
consensus TCCAGAAAGAAGAAACAGGAGAATAAGTAGAAATACTTGATCGAGCTCAGGAGTCAGGAG
 
. : . : . : . : . : . :
JMFF049J17+ TATATATGGCAGCCAATTCAATTCAATTCAATTCAAACAGCGTATAAGTTTTGTTATAAC
JMFF017F02+ TATATATGGCAGCCAATTCAATTCAATTCAATTCAAACAGCGTACAAGTTTTGTTATAAC
JMFF031M21+ TATATATGGCAGCCAATTCAATTCAATTCAATTCAAACAGCGTATAAGTTTTGTTATAAC
JMFF031O18+ TATATATGGCAGCCAATTCAATTCAATTCAATTCAAACAGCGTATAAGTTTTGTTATAAC
JMFF039K07+ TATATATGGCAGCCAATTCAATTCAATTCAATTCAAACAGCGTATAAGTTTTGTTATAAC
JMFF005D10+ TATATATGGCAGCCAATTCAATTCAATTCAATTCAAACAGCGTATAAGTTTTGTTATAAC
JMFF034P16+ TATATATGGCAGCCAATTCAATTCAATTCAATTCAAACAGCGTATAAGTTTTGTTATAAC
                      ____________________________________________________________
consensus TATATATGGCAGCCAATTCAATTCAATTCAATTCAAACAGCGTATAAGTTTTGTTATAAC
 
. : . : . : . : . : . :
JMFF049J17+ ACTGGACCACTACTCTCTCTCTCTCTCTCTCTGGTTTTGCTAATGAGGCTTTAAACTAAT
JMFF017F02+ ACTGGACCACTACTCTCTCTCTCTCTCTCTCTGGTTTTGCTAATGAGGCTTTAAACTAAT
JMFF031M21+ ACTGGACCACTACTCTCTCTCTCTCTCTCTCTGGTTTTGCTAATGAGGCTTTAAACTAAT
JMFF031O18+ ACTGGACCACTA--CTCTCTCTCTCTCTCTCTGGTTTTGCTAATGAGGCTTTAAACTAAT
JMFF039K07+ ACTGGACCACTACTCTCTCTCTCTCTCTCTCTGGTTTTGCTAATGAGGCTTTAAACTAAT
JMFF005D10+ ACTGGACCACTACTCTCTCTCTCTCTCTCTCTGGTTTTGCTAATGAGGCTTTAAACTAAT
JMFF034P16+ ACTGGACCACTACTCTCTCTCTCTCTCTCTCTGGTTTTGCTAATGAGGCTTTAAACTAAT
                      ____________________________________________________________
consensus ACTGGACCACTACTCTCTCTCTCTCTCTCTCTGGTTTTGCTAATGAGGCTTTAAACTAAT
 
. : . : . : . : . : . :
JMFF049J17+ CTGACACAGATTTGTCGATGAATTTTGCAGAAACGCAAATGAATGCGTTGTCGATGATTA
JMFF017F02+ CTGACACAGATTTGTCGATGAATTTTGCAGAAACGCAAATGAATGCGTTGTCGATGATTA
JMFF031M21+ CTGACACAGATTTGTCGATGAATTTTGCAGAAACGCAAATGAATGCGTTGTCGATGATTA
JMFF031O18+ CTGACACAGATTTGTCGATGAATTTTGCAGAAACGCAAATGAATGCGTTGTCGATGATTA
JMFF039K07+ CTGACACAGATTTGTCGATGAATTTTGCAGAAACGCAAATGAATGCGTTGTCGATGATTA
JMFF005D10+ CTGACACAGATTTGTCGATGAATTTTGCAGAAACGCAAATGAATGCGTTGTCGATGATTA
JMFF034P16+ CTGACACAGATTTGTCGATGAATTTTGCAGAAACGCAAATGAATGCGTTGTCGATGATTA
                      ____________________________________________________________
consensus CTGACACAGATTTGTCGATGAATTTTGCAGAAACGCAAATGAATGCGTTGTCGATGATTA
 
. : . : . : . : . : . :
JMFF049J17+ TCTATATGCGCTCAGAACAGTACAGTGGAGAAAGGTCAAACGAGAAAAATAAACAAAAAG
JMFF017F02+ TCTATATGCGCTCAGAACAGTACAGTGGAGAAAGGTCAAACGAGAAAAATAAACAAAAAG
JMFF031M21+ TCTATATGCGCTCAGAACAGTACAGTGGAGAAAGGTCAAACGAGAAAAATAAACAAAAAG
JMFF031O18+ TCTATATGCGCTCAGAACAGTACAGTGGAGAAAGGTCAAACGAGAAAAATAAACAAAAAG
JMFF039K07+ TCTATATGCGCTCAGAACAGTACAGTGGAGAAAGGTCAAACGAGAAAAATAAACAAAAAG
JMFF005D10+ TCTATATGCGCTCAGAACAGTACAGTGGAGAAAGGTCAAACGAGAAAAATAAACAAAAAG
JMFF034P16+ TCTATATGCGCTCAGAACAGTACAGTGGAGAAAGGTCAAACGAGAAAAATAAACAAAAAG
                      ____________________________________________________________
consensus TCTATATGCGCTCAGAACAGTACAGTGGAGAAAGGTCAAACGAGAAAAATAAACAAAAAG
 
. : . : . : . : . : . :
JMFF049J17+ CTCAGCTCGTGGGGGCTTTTTGCAGGCAGGCCTCTGATCTGCTTCTTCTTCTGCTTGC
JMFF017F02+ CTCAGCTCGTGGGGGCTTTTTGCAGGCAGGCCTCTGATCTGCTTCTTCTTCTGCTTG
JMFF031M21+ CTCAGCTCGTGGGGGCTTTTTGCAGGCAGGCCTCTGATCTGCTTCTTCTTCTGCTTGC
JMFF031O18+ CTCAGCTCGTGGGGGCTTTTTGCAGGCAGGCCTCTGATCTGCTTCTTCTTCTGCTTGC
JMFF039K07+ CTCAGCTCGTGGGGGCTTTTTGCAGGCAGGCCTCTGATCTGCTTCTTCTTCTGCTT
JMFF005D10+ CTCAGCTCGTGGGGGCTTTTTGCAGGCAGGCCTCTGATCTGCTTCTTCTTCTGCTTGC
JMFF034P16+ CTCAGCTCGTGGGGGCTTTTTGCAGGCAGGCCTCTGATCTGCTTCTTCTTCTGCTTGCAG
                      ____________________________________________________________
consensus CTCAGCTCGTGGGGGCTTTTTGCAGGCAGGCCTCTGATCTGCTTCTTCTTCTGCTTGCAG