Contig 007424:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF033H01Sequence512007424 (3)ref|XP_009803015.1|5e-58PREDICTED: trafficking protein particle complex subunit 11 isoform X1 [Nicotian715007424 (3)ref|XP_009803015.1|6e-44PREDICTED: trafficking protein particle complex subunit 11 isoform X1 [Nicotian
JMFS127H04Sequence624007424 (3)ref|XP_009803015.1|2e-95PREDICTED: trafficking protein particle complex subunit 11 isoform X1 [Nicotian

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF033H01- ATGATGCATAGCAGCTCAGAATCATTTGGATCTCTACAAAACTCCAGTTTTTTCAGTTA
                      ____________________________________________________________
consensus ATGATGCATAGCAGCTCAGAATCATTTGGATCTCTACAAAACTCCAGTTTTTTCAGTTA
 
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rJMFF033H01- TCGCAACTATGAACATGTAAATACATAGAAATGTAAGAAATCTAGAGCGCTAACAAACAT
                      ____________________________________________________________
consensus TCGCAACTATGAACATGTAAATACATAGAAATGTAAGAAATCTAGAGCGCTAACAAACAT
 
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rJMFF033H01- GCCTTTGGCGTTTGAATGAGCTACAACCACCACCACCACCAATTTGCTGTTCCTTCCTCG
                      ____________________________________________________________
consensus GCCTTTGGCGTTTGAATGAGCTACAACCACCACCACCACCAATTTGCTGTTCCTTCCTCG
 
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rJMFF033H01- TATCACAGCTCTGTCCACATTCCACATATCATCACAAGTAATTCCAATGCCACAAAAATA
                      ____________________________________________________________
consensus TATCACAGCTCTGTCCACATTCCACATATCATCACAAGTAATTCCAATGCCACAAAAATA
 
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rJMFF033H01- ACATTCTAATACGAACACAAGTACAGACTTTCACGTGGAGACAAAAGGCAAGCATTGCTC
                      ____________________________________________________________
consensus ACATTCTAATACGAACACAAGTACAGACTTTCACGTGGAGACAAAAGGCAAGCATTGCTC
 
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rJMFF033H01- TATCACCAGTGAAGTACTGTAGCGACGGAAAAGGGGACCAAGGAATCGTACTTGAGGTTT
JMFS127H04+ TTGAGGTTT
JMFF033H01+ TTGAGGTTT
                      ____________________________________________________________
consensus TATCACCAGTGAAGTACTGTAGCGACGGAAAAGGGGACCAAGGAATCGTACTTGAGGTTT
 
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rJMFF033H01- TCGAGATCGGTGCAGACCTGAAGCCACTGAGCGGGGTCTCCGGTGACGTGATCGTAGTTA
JMFS127H04+ TCGAGATCGGTGCAGACCTGAAGCCACTGAGCGGGGTCTCCGGTGACGTGATCGTAGTTA
JMFF033H01+ TCGAGATCGGTGCAGACCTGAAGCCACTGAGCGGGGTCTCCGGTGACGTGATCGTAGTTA
                      ____________________________________________________________
consensus TCGAGATCGGTGCAGACCTGAAGCCACTGAGCGGGGTCTCCGGTGACGTGATCGTAGTTA
 
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rJMFF033H01- AAGAAGGCAGCGACGACGGCAGGAACTCTAGTCCGGTGCTTGGGAAGCCAATCTCTCTTT
JMFS127H04+ AAGAAGGCAGCGACGACGGCAGGAACTCTAGTCCGGTGCTTGGGAAGCCAATCTCTCTTT
JMFF033H01+ AAGAAGGCAGCGACGACGGCAGGAACTCTAGTCCGGTGCTTGGGAAGCCAATCTCTCTTT
                      ____________________________________________________________
consensus AAGAAGGCAGCGACGACGGCAGGAACTCTAGTCCGGTGCTTGGGAAGCCAATCTCTCTTT
 
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rJMFF033H01- AAGATGCCGCCCACGGGTTGAGATGAGGCCGGATTATCCTTCGGAGGCTTCGCGAGTACC
JMFS127H04+ AAGATGCCGCCCACGGGTTGAGATGAGGCCGGATTATCCTTCGGAGGCTTCGCGAGTACC
JMFF033H01+ AAGATGCCGCCCACGGGTTGAGATGAGGCCGGATTATCCTTCGGAGGCTTCGCGAGTACC
                      ____________________________________________________________
consensus AAGATGCCGCCCACGGGTTGAGATGAGGCCGGATTATCCTTCGGAGGCTTCGCGAGTACC
 
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rJMFF033H01- GAGATCTTTGAGAAATCAGGCAGTGCCAGCGTATTTATCGGCGGCTGCTCCGCGTGGAGG
JMFS127H04+ GAGATCTTTGAGAAATCAGGCAGTGCCAGCGTATTTATCGGCGGCTGCTCCGCGTGGAGG
JMFF033H01+ GAGATCTTTGAGAAATCAGGCAGTGCCAGCGTATTTATCGGCGGCTGCTCCGCGTGGAGG
                      ____________________________________________________________
consensus GAGATCTTTGAGAAATCAGGCAGTGCCAGCGTATTTATCGGCGGCTGCTCCGCGTGGAGG
 
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rJMFF033H01- TGCGCCGTGATCGTTGCGTGCAGATCCGGACAGCCCACTAGAGATACTAGAGCAACCGGT
JMFS127H04+ TGCGCCGTGATCGTTGCGTGCAGATCCGGACAGCCCACTAGAGATACTAGAGCAACCGGT
JMFF033H01+ TGCGCCGTGATCGTTGCGTGCAGATCCGGACAGCCCACTAGAGATACTAGAGCAACCGGT
                      ____________________________________________________________
consensus TGCGCCGTGATCGTTGCGTGCAGATCCGGACAGCCCACTAGAGATACTAGAGCAACCGGT
 
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rJMFF033H01- GGGGGTACGGAGTTCTTCTGGATATTCCTCCATGGTTGTTAACTACGGCGCGGCGG
JMFS127H04+ -GGGGTACGGAGTTCTTCTGGATATTCCTCCATGGTTGTTAACTACGGCGCGGCGGAGAA
JMFF033H01+ -GGGGTACGGAGTTCTTCTGGATATTCCTCCATGGTTGTTAACTACGGCGCGGCGGAGAA
                      ____________________________________________________________
consensus -GGGGTACGGAGTTCTTCTGGATATTCCTCCATGGTTGTTAACTACGGCGCGGCGGAGAA
 
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JMFS127H04+ CGACGGAGGA
JMFF033H01+ CGACGGAGGAGCGGTGGCGCTAATGAAATGAAACTCCGGAATTCAGATTGGTTATGCAGT
                      ____________________________________________________________
consensus CGACGGAGGAGCGGTGGCGCTAATGAAATGAAACTCCGGAATTCAGATTGGTTATGCAGT