Contig 007420:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF033B22Sequence436007420 (8)683004168 (5)ref|XP_009587969.1|4e-18PREDICTED: protein ETHYLENE INSENSITIVE 3-like [Nicotiana tomentosiformis] gb|AA
JMFF050M14Sequence550007420 (8)ref|XP_009801714.1|3e-11PREDICTED: protein ETHYLENE INSENSITIVE 3-like [Nicotiana sylvestris] gb|AAP0399590004168 (5)dbj|BAA74714.1|3e-09transcription factor TEIL [Nicotiana tabacum]
JMFS017F01Sequence591007420 (8)gb|AAP03999.1|9e-26EIL3 [Nicotiana tabacum]
JMFS153A11Sequence618007420 (8)gb|AAP03999.1|3e-33EIL3 [Nicotiana tabacum]
JMFS163B07Sequence584007420 (8)gb|AAP03999.1|8e-26EIL3 [Nicotiana tabacum]
JMSF003B06Sequence261007420 (8)744004168 (5)dbj|BAA74714.1|7e-37transcription factor TEIL [Nicotiana tabacum]
JMSF020I03Sequence650007420 (8)gb|AAP03999.1|6e-41EIL3 [Nicotiana tabacum]759004168 (5)dbj|BAA74714.1|3e-38transcription factor TEIL [Nicotiana tabacum]
JMSF028P15Sequence595007420 (8)gb|AAP03999.1|2e-48EIL3 [Nicotiana tabacum]735004168 (5)dbj|BAA74714.1|1e-36transcription factor TEIL [Nicotiana tabacum]

Alignment

This contig is upended


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JMSF028P15+                             CAGCCGGGCCATTNNGATCAAACCTCACCTTATCCTTCCACC
JMSF020I03+                                                                TTCCACC
                      ____________________________________________________________
consensus                               CAGCCGGGCCATTNNGATCAAACCTCACCTTATCCTTCCACC
 
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JMSF028P15+           ACTCCCTCAAATTATCAGACGCCCCGCTCACCGGCTTCCCTTTCTCCGGGATGATCCCGT
JMFS153A11+                              CGCCCCGCTCACGGGCTTCCCTTTCTNCGGGATGATCCCGT
JMFS017F01+                                                              TGATCCCGT
JMFS163B07+                                                             ATGATCCCGT
JMSF020I03+           ACTCCCTCAAATTATCAGACGCCCCGCTCACCGGCTTCCCTTTCTCCGGGATGATCCCGT
                      ____________________________________________________________
consensus             ACTCCCTCAAATTATCAGACGCCCCGCTCACCGGCTTCCCTTTCTCCGGGATGATCCCGT
 
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JMSF028P15+           AAACGAACCCNTGAGCCTTGCACACCTCCATCATCTTCAACATGTACTTCAAGATCCCGT
JMFS153A11+           AAACGAACCCCTGAGCCTTGCACACCTCCATCATCTTCAACATGTACTTCAAGATCCCGT
JMFS017F01+           AAACGAACCCNTGAGCCTTGCACACCTCCATCATCTTCAACATGTACTTCAAGATCCCGT
JMFS163B07+           AANCGAACCCCTGAGCCTTGCACACCTCCATCATCTTCAACATGTACTTCAAGATCCCGT
JMSF020I03+           AAACGAACCCCTGAGCCTTGCACACCTCCATCATCTTCAACATGTACTTCAAGATCCCGT
JMFF050M14+                                                             AAGATCCCGT
                      ____________________________________________________________
consensus             AAACGAACCCCTGAGCCTTGCACACCTCCATCATCTTCAACATGTACTTCAAGATCCCGT
 
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JMSF028P15+           CCTGAGCCCTCGACATCTTCTTCCTCCTCGCCTGCTCCTGAGACTTGTTCGTATCCCGTT
JMFS153A11+           CCTGAGCCCTCGACATCTTCTTCCTCCTCGCCTGCTCCTGAGACTTGTTCGTCTCCCGTT
JMFS017F01+           CCTGAGCCCTCGACATCTTCTTCCTCCTCGCCTGCTCCTGAGACTTGTTCGTCTCCCGTT
JMFS163B07+           CCTGAGCCCTCGACATCTTCTTCCTCCTCGCCTGCTCCTGAGACTTGTTCGTCTCCCGTT
JMSF020I03+           CCTGAGCCCTCGACATCTTCTTCCTCCTCGCCTGCTCCTGAGACTTGTTCGTCTCCCGTT
JMFF050M14+           CCTGAGCCCTCGACATCTTCTTCCTCCTCGCCTGCTCCTGAGACTTGTTCGTCTCCCGTT
                      ____________________________________________________________
consensus             CCTGAGCCCTCGACATCTTCTTCCTCCTCGCCTGCTCCTGAGACTTGTTCGTCTCCCGTT
 
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JMSF028P15+           TAGCCCCATCCTCGCCCTCGCCCTCCTTACTCTTGCTCATCTCCTTCAAACGTTTCAGCT
JMFS153A11+           TAGCCCCATCCTCGCCCTCGCCCTCCTTACTCTTGCTCATCTCCTTCAAACGTTTCAGCT
JMFS017F01+           TAGCCCCATCCTCGCCCTCGCCCTCCTTACTCTTGCTCATCTCCTTCAAACGTTTCAGCT
JMFS163B07+           TAGCCCCATCCTCGCCCTCGCCCTCCTTACTCTTGCTCATCTCCTTCAAACGTTTCAGCT
JMSF020I03+           TAGCCCCATCCTCGCCCTCGCCCTCCTTACTCTTGCTCATCTCCTTCAAACGTTTCAGCT
JMFF050M14+           TAGCCCCATCCTCGCCCTCGCCCTCCTTACTCTTGCTCATCTCCTTCAAACGTTTCAGCT
JMFF033B22+                                                      CTTCAAACGTTTCAGNT
                      ____________________________________________________________
consensus             TAGCCCCATCCTCGCCCTCGCCCTCCTTACTCTTGCTCATCTCCTTCAAACGTTTCAGCT
 
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JMSF028P15+           TCATCTTGTCCCTCCACATCCTCCTCTCCAGCTCCTCCATATCCATTTCATCGTCGCTAT
JMFS153A11+           TCATCTTGTCCCTCCACATCCTCCTCTCCAGCTCCTCCATATCCATTTCATCGTCGCTAT
JMFS017F01+           TCATCTTGTCCCTCCACATCCTCCTCTCCAGCTCCTCCATATCCATTTCATCGTCGCTAT
JMFS163B07+           TCATCTTGTCCCTCCACATCCTCCTCTCCAGCTCCTCCATATCCATTTCATCGTCGCTAT
JMSF020I03+           TCATCTTGTCCCTCCACATCCTCCTCTCCAGCTCCTCCATATCCATTTCATCGTCGCTAT
JMFF050M14+           TCATCTTGTCCCTCCACATCCTCCTCTCCAGCTCCTCCATATCCATTTCATCGTCGCTAT
JMFF033B22+           TCATNTTGTCCCTCCACATCCTCCTCTCCAGCTCCTCCATATCCATTTCATCGTCGCTAT
                      ____________________________________________________________
consensus             TCATCTTGTCCCTCCACATCCTCCTCTCCAGCTCCTCCATATCCATTTCATCGTCGCTAT
 
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JMSF028P15+           AGTCATCCTCCACCTCCACCACCACCGCCGCCTCGGGCTCAGCCCCGGGCGGTGGAGCAA
JMFS153A11+           AGTCATCCTCCACCTCCACCACCACCGCCGCCTCGGGCTCAGCCCCGGGCGGTGGAGCAA
JMFS017F01+           AGTCATCCTCCACCTCCACCACCACCGCCGCCTCGGGCTCAGCCCCGGGCGGTGGAGCAA
JMFS163B07+           AGTCATCCTCCACCTCCACCACCACCGCCGCCTCGGGCTCAGCCCCGGGCGGTGGAGCAA
JMSF020I03+           AGTCATCCTCCACCTCCACCACCACCGCCGCCTCGGGCTCAGCCCCGGGCGGTGGAGCAA
JMFF050M14+           AGTCATCCTCCACCTCCACCACCACCGCCGCCTCGGGCTCAGCCCCGGGCGGTGGAGCAA
JMFF033B22+           AGTCATCCTCCACCTCCACCACCACCGCCGCCTCGGGCTCAGCCCCGGGCGGTGGAGCAA
                      ____________________________________________________________
consensus             AGTCATCCTCCACCTCCACCACCACCGCCGCCTCGGGCTCAGCCCCGGGCGGTGGAGCAA
 
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JMSF028P15+           CCATATCAGCTGGCTCTTTCAGAGGAGCCAGGAAGGAATCAAGATCATTACAGAACCCCA
JMFS153A11+           CCATATCAGCTGGCTCTTTCAGAGGAGCCAGGAAGGAATCAAGATCATTACAGAACCCCA
JMFS017F01+           CCATATCAGCTGGCTCTTTCAGAGGAGCCAGGAAGGAATCAAGATCATTACAGAACCCCA
JMFS163B07+           CCATATCAGCTGGCTCTTTCAGAGGAGCCAGGAAGGAATCAAGATCATTACAGAACCCCA
JMSF020I03+           CCATATCAGCTGGCTCTTTCAGAGGAGCCAGGAAGGAATCAAGATCATTACAGAACCCCA
JMFF050M14+           CCATATCAGCTGGCTCTTTCAGAGGAGCCAGGAAGGAATCAAGATCATTACAGAACCCCA
JMSF003B06+                                   GAGCCAGGAAGGAATCAAGATCATTACAGAACCCCA
JMFF033B22+           CCATATCAGCTGGCTCTTTCAGAGGAGCCAGGAAGGAATCAAGATCATTACAGAACCCCA
                      ____________________________________________________________
consensus             CCATATCAGCTGGCTCTTTCAGAGGAGCCAGGAAGGAATCAAGATCATTACAGAACCCCA
 
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JMSF028P15+           TATCATCAAACATCATCATCTTCAATCC-CAGCAGCCTCTAAATCCAAGAACACAATTGG
JMFS153A11+           TATCATCAAACATCATCATCTTCAATCC-CAGCAGCCTCTAAATCCAAGAACACAATTGG
JMFS017F01+           TATCATCAAACATCATCATCTTCAATCC-CAGCAGCCTCTAAATCCAAGAACACAATTGG
JMFS163B07+           TATCATCAAACATCATCATCTTCAATCC-CAGCAGCCTCTAAATCCAAGAACACAATTGG
JMSF020I03+           TATCATCAAACATCATCATCTTCAATCC-CAGCAGCCTCTAAATCCAAGAACACAATTGG
JMFF050M14+           TATCATCAAACATCATCATCTTCAATCCNCAGCCACCTCTAAATCCAAGAACACAATTGG
JMSF003B06+           TATCATCAAACATCATCATCTTCAATCC-CAGCAGCCTCTAAATCCAAGAACACAATTGG
JMFF033B22+           TATCATCAAACATCATCATCTTCAATCC-CAGCAGCCTCTAAATCCAAGAACACAATTGG
                      ____________________________________________________________
consensus             TATCATCAAACATCATCATCTTCAATCC-CAGCAGCCTCTAAATCCAAGAACACAATTGG
 
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JMSF028P15+           GAATTTGGGATTCAACAACCAAACCTGCAAATTCAGTGCCTCAGAGGTTTCTGGGTTTTT
JMFS153A11+           GAATTTGGGATTCAACAACCAAACCTGCAAATTCAGTGCCTCAGAGGTTTCTGGGTTTTT
JMFS017F01+           GAATTTGGGATTCAACAACCAAACCTGCAAATTCAGTGCCTCAGAGGTTTCTGGGTTTTT
JMFS163B07+           GAATTTGGGATTCAACAACCAAACCTGCAAATTCAGTGCCTCAGAGGTTTCTGGGTTTTT
JMSF020I03+           GAATTTGGGATTCAACAACCAAACCTGCAAATTCAGTGCCTCAGAGGTTTCTGGGTTTTT
JMFF050M14+           GAATTTGGGATTCAACAACCAAACCTGCAAATTCAGTGCCTCAGAGGTTTCTGGGTTTTT
JMSF003B06+           GAATTTGGGATTCAACAACCAAACCTGCAAATTCAGTGCCTCAGAGGTTTCTGGGTTTTT
JMFF033B22+           GAATTTGGGATTCAACAACCAAACCTGCAAATTCAGTGCCTCAGAGGTTTCTGGGTTTTT
                      ____________________________________________________________
consensus             GAATTTGGGATTCAACAACCAAACCTGCAAATTCAGTGCCTCAGAGGTTTCTGGGTTTTT
 
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JMSF028P15+           TCTCTCTTCCAAC                                               
JMFS153A11+           TCTCTCTTCCAACAGTCTGTTCAACTCTTCTCTCCTTGAGAATAATTGACTCTCTAGACT
JMFS017F01+           TCTCTCTTCCAACAGTCTGTTCAACTCTTCTCTCCTTGAGAATAATTGACTCTCTAGACT
JMFS163B07+           TCTCTCTTCCAACAGTCTGTTCAACTCTTCTCTCCTTGAGAATAATTGACTCTCTAGACT
JMSF020I03+           TCTCTCTTCCAACAGTCTGTTCAACTCTTCTCTCCTTGAGAATAATTGACTCTCTAGACT
JMFF050M14+           TCTCTCTTCCAACAGTCTGTTCAACTCTTCTCTCCTTGAGAATAATTGACTCTCTAGACT
JMSF003B06+           TCTCTCTTCCAACAGTCTGTTCAACTCTTCTCTCCTTGAGAATAATTGACTCTCTAGACT
JMFF033B22+           TCTCTCTTCCAACAGTCTGTTCAACTCTTCTCTCCTTGAGAATAATTGACTCTCTAGACT
                      ____________________________________________________________
consensus             TCTCTCTTCCAACAGTCTGTTCAACTCTTCTCTCCTTGAGAATAATTGACTCTCTAGACT
 
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JMFS153A11+           TCAGAGGATAGAGAGAGAAAAGTACACACACGAAAGAA                      
JMFS017F01+           TCAGAGGATAGAGAGAGAAAAGTACACACACGAAAGAAGGTTC                 
JMFS163B07+           TCAGAGGATAGAGAGAGAAAAGTACACACACGAAA                         
JMSF020I03+           TCAGAGGATAGAGAGAGAAAAGTACACACACGAAAGAAGGTTC                 
JMFF050M14+           TCAGAGGATAGAGAGAGAAAAGTACACACACGAAAGAAGGTTCAGAGAAATGGAAGTTAC
JMSF003B06+           TCAGAGGATAGAGAGAGAAAAGTACACACACGAAAGAAGGTTCAG               
JMFF033B22+           TCAGAGGATAGAGAGAGAAAAGTACACACACGAAAGAAGGTTCAGAGAAATGGAAGTTAC
                      ____________________________________________________________
consensus             TCAGAGGATAGAGAGAGAAAAGTACACACACGAAAGAAGGTTCAGAGAAATGGAAGTTAC