Contig 007416:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008F18Sequence548007416 (5)ref|XP_009610396.1|2e-59PREDICTED: zinc finger CCCH domain-containing protein 66-like [Nicotiana toment728002618 (4)gb|KDP46484.1|4e-49hypothetical protein JCGZ_08456 [Jatropha curcas]
JMFF031O21Sequence583007416 (5)ref|XP_009610396.1|2e-59PREDICTED: zinc finger CCCH domain-containing protein 66-like [Nicotiana toment709002618 (4)gb|KDP46484.1|2e-48hypothetical protein JCGZ_08456 [Jatropha curcas]
JMFS109H07Sequence604007416 (5)ref|XP_009610396.1|8e-93PREDICTED: zinc finger CCCH domain-containing protein 66-like [Nicotiana toment
JMSF013P04Sequence497007416 (5)ref|XP_009610396.1|6e-51PREDICTED: zinc finger CCCH domain-containing protein 66-like [Nicotiana toment668002618 (4)gb|KDP46484.1|1e-46hypothetical protein JCGZ_08456 [Jatropha curcas]
JMSF045O19Sequence623007416 (5)ref|XP_009795435.1|8e-63PREDICTED: zinc finger CCCH domain-containing protein 66-like isoform X2 [Nicot637002618 (4)ref|XP_007016084.1|1e-44Zinc finger family protein [Theobroma cacao] gb|EOY33703.1| Zinc finger family p

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS109H07+ ACTC
                      ____________________________________________________________
consensus ACTC
 
. : . : . : . : . : . :
JMFS109H07+ GGTCCAGTCATGAGAGTACGCCCGGGAACATGGCTTCACCTTAAACGTGTACATTCTGAA
                      ____________________________________________________________
consensus GGTCCAGTCATGAGAGTACGCCCGGGAACATGGCTTCACCTTAAACGTGTACATTCTGAA
 
. : . : . : . : . : . :
JMFS109H07+ GTCATCAGTCCCATAAATACCATTCTTTATGTCTGGAAGGGAGGGATCAATGGGGTATTC
                      ____________________________________________________________
consensus GTCATCAGTCCCATAAATACCATTCTTTATGTCTGGAAGGGAGGGATCAATGGGGTATTC
 
. : . : . : . : . : . :
JMFS109H07+ TTTCCTCTCACTCCCATCTTTCGAGACATTTGGATAGACCACCCGTTGCTCTTCAACCTT
                      ____________________________________________________________
consensus TTTCCTCTCACTCCCATCTTTCGAGACATTTGGATAGACCACCCGTTGCTCTTCAACCTT
 
. : . : . : . : . : . :
JMFS109H07+ TTCAATCAACCCGTAGCCTTCATCAGTATCACCACCGCCCTTGAGAACATGCTCCATCAT
JMSF045O19+ ATCACCACCGCCNTTGAGAACATGNTCCATCAT
                      ____________________________________________________________
consensus TTCAATCAACCCGTAGCCTTCATCAGTATCACCACCGCCCTTGAGAACATGCTCCATCAT
 
. : . : . : . : . : . :
JMFS109H07+ CTTCTTCTGCGAGGTGAATCTGCAGAAGGGGATCAAGTCAGCAGCCCGGTTTCCATTGGC
JMFF008F18+ ATCTGCAGAAGGGGATCAAGTCAGCAGCCCGGTTTCCATTGGC
JMSF045O19+ CTTTTTATGCGAGGTGAATCTGCAGAAGGGGATCAAGTCAGCAGCCCGGTTTCCATTGGC
JMFF031O21+ ATCTGCAGAAGGGGATCAAGTCAGCAGCCCGGTTTCCATTGGC
                      ____________________________________________________________
consensus CTTTTTCTGCGAGGTGAATCTGCAGAAGGGGATCAAGTCAGCAGCCCGGTTTCCATTGGC
 
. : . : . : . : . : . :
JMFS109H07+ GTCCACCAAATTCTCATCAGCCGAGTAACCAAGCAAGAGCTTGATAACATCAAGCGAGGC
JMSF013P04+ CAAGCAAGAGCTTGATAACATCAAGCGAGGC
JMFF008F18+ GTCCACCAAATTCTCATCAGCCGAGTAACCAAGCAAGAGCTTGATAACATCAAGCGAGGC
JMSF045O19+ GTCCACCAAATTCTCATCAGCCGAGTAACCAAGCAAGAGCTTGATAACATCAAGCGAGGC
JMFF031O21+ GTCCACCAAATTCTCATCAGCCGAGTAACCAAGCAAGAGCTTGATAACATCAAGCGAGGC
                      ____________________________________________________________
consensus GTCCACCAAATTCTCATCAGCCGAGTAACCAAGCAAGAGCTTGATAACATCAAGCGAGGC
 
. : . : . : . : . : . :
JMFS109H07+ AGTAGAGCCACCAGAAACCGCACAGTGGAGAGCAGTAGCCCCATCAGAGCCACAAGCTCG
JMSF013P04+ AGTAGAGCCACCAGAAACCGCACAGTGGAGAGCAGTAGCCCCATCAGAGCCACAAGCTCG
JMFF008F18+ AGTAGAGCCACCAGAAACCGCACAGTGGAGAGCAGTAGCCCCATCAGAGCCACAAGCTCG
JMSF045O19+ AGTAGAGCCACCAGAAACCGCACAGTGGAGAGCAGTAGCCCCATCAGAGCCACAAGCTCG
JMFF031O21+ AGTAGAGCCACCAGAAACCGCACAGTGGAGAGCAGTAGCCCCATCAGAGCCACAAGCTCG
                      ____________________________________________________________
consensus AGTAGAGCCACCAGAAACCGCACAGTGGAGAGCAGTAGCCCCATCAGAGCCACAAGCTCG
 
. : . : . : . : . : . :
JMFS109H07+ GTTAATCTCACCACAACCGTTCTCCAGAATATAATTCAGCACCCGTTTGCTACCAAAAAT
JMSF013P04+ GTTAATCTCACCACAACCGTTCTCCAGAATATAATTCAGCACCCGTTTGCTACCAAAAAT
JMFF008F18+ GTTAATCTCACCACAACCGTTCTCCAGAATATAATTCAGCACCCGTTTGCTACCAAAAAT
JMSF045O19+ GTTAATCTCACCACAACCGTTCTCCAGAATATAATTCAGCACCCGTTTGCTACCAAAAAT
JMFF031O21+ GTTAATCTCACCACAACCGTTCTCCAGAATATAATTCAGCACCCGTTTGCTACCAAAAAT
                      ____________________________________________________________
consensus GTTAATCTCACCACAACCGTTCTCCAGAATATAATTCAGCACCCGTTTGCTACCAAAAAT
 
. : . : . : . : . : . :
JMFS109H07+ TGAAGCAACCATAAGGGGTGTCCTCTCCTCATACCCCATCTTCTTAGAACCAATTCTTCT
JMSF013P04+ TGAAGCAACCATAAGGGGTGTCCTCTCCTCATACCCCATCTTCTTAGAACCAATTCTTCT
JMFF008F18+ TGAAGCAACCATAAGGGGTGTCCTCTCCTCATACCCCATCTTCTTAGAACCAATTCTTCT
JMSF045O19+ TGAAGCAACCATAAGGGGTGTCCTCTCCTCATACCCCATCTTCTTAGAACCAATTCTTCT
JMFF031O21+ TGAAGCAACCATAAGGGGTGTCCTCTCCTCATACCCCATCTTCTTAGAACCAATTCTTCT
                      ____________________________________________________________
consensus TGAAGCAACCATAAGGGGTGTCCTCTCCTCATACCCCATCTTCTTAGAACCAATTCTTCT
 
. : . : . : . : . : . :
JMFS109H07+ CCCATACCACAATCCTGACATGTTCACATCAAGACCCTCTTCTTCAACAGCTGCTCTAAA
JMSF013P04+ CCCATACCACAATCCTGACATGTTCACATCAAGACCCTCTTCTTCAACAGCTGCTCTAAA
JMFF008F18+ CCCATACCACAATCCTGACATGTTCACATCAAGACCCTCTTCTTCAACAGCTGCTCTAAA
JMSF045O19+ CCCATACCACAATCCTGACATGTTCACATCAAGACCCTCTTCTTCAACAGCTGCTCTAAA
JMFF031O21+ CCCATACCACAATCCTGACATGTTCACATCAAGACCCTCTTCTTCAACAGCTGCTCTAAA
                      ____________________________________________________________
consensus CCCATACCACAATCCTGACATGTTCACATCAAGACCCTCTTCTTCAACAGCTGCTCTAAA
 
. : . : . : . : . : . :
JMSF013P04+ CCCTCTAAGATCATCATTCGCGGATAACTCGAGCAAAATCTCTTGCCCTTGAATTCCACC
JMFF008F18+ CCCTCTAAGATCATCATTCGCGGATAACTCGAGCAAAATCTCTTGCCCTTGAATTCCACC
JMSF045O19+ CCCTCTAAGATCATCATTCGCGGATAACTCGAGCAAAATCTCTTGCCCTTGAATTCCACC
JMFF031O21+ CCCTCTAAGATCATCATTCGCGGATAACTCGAGCAAAATCTCTTGCCCTTGAATTCCACC
                      ____________________________________________________________
consensus CCCTCTAAGATCATCATTCGCGGATAACTCGAGCAAAATCTCTTGCCCTTGAATTCCACC
 
. : . : . : . : . : . :
JMSF013P04+ TTCCATAGCTAGATCATCAGGAACAACTTTCCTCCTAGAGCCACTACACATCCTATCAAT
JMFF008F18+ TTCCATAGCTAGATCATCAGGAACAACTTTCCTCCTAGAGCCACTACACATCCTATCAAT
JMSF045O19+ TTCCATAGCTAGATCATCAGGAACAACTTTCCTCCTAGAGCCACTACACATCCTATCAAT
JMFF031O21+ TTCCATAGCTAGATCATCAGGAACAACTTTCCTCCTAGAGCCACTACACATCCTATCAAT
                      ____________________________________________________________
consensus TTCCATAGCTAGATCATCAGGAACAACTTTCCTCCTAGAGCCACTACACATCCTATCAAT
 
. : . : . : . : . : . :
JMSF013P04+ CTCTCTCAAATTGGGCAGAGCAGAGAGAAAAGGGAAGAATATGAAACCCAGATTTCCCGC
JMFF008F18+ CTCTC
JMSF045O19+ CTCTCTCAAATTGGGCAGAGCAGAGAGAAAAGGGAAGAATATGAAACCCAGATTTCCCGC
JMFF031O21+ CTCTCTCAAATTGGGCAGAGCAGAGAGAAAAGGGAAGAATATGAAACCCAGATTTCCCGC
                      ____________________________________________________________
consensus CTCTCTCAAATTGGGCAGAGCAGAGAGAAAAGGGAAGAATATGAAACCCAGATTTCCCGC
 
. : . : . : . : . : . :
JMSF013P04+ ACAGGAAAAAGGGGAGCTAAACTCCAAATTGCTTAGAATGGGT
JMSF045O19+ ACAGGAAAAAGGGGAGCTAAACTCCAAATTGCTTAGAATGGGT
JMFF031O21+ ACAGGAAAAAGGGGAGCTAAACTCCAAATTGCTCAGAATGGGTTCACGCAATTCCTCTCC
                      ____________________________________________________________
consensus ACAGGAAAAAGGGGAGCTAAACTCCAAATTGCTTAGAATGGGTTCACGCAATTCCTCTCC