Contig 007411:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF031C19Sequence507007411 (2)ref|XP_009625733.1|2e-21PREDICTED: dihydroorotate dehydrogenase (quinone), mitochondrial [Nicotiana tom619011097 (2)ref|XP_004228528.1|1e-68PREDICTED: dihydroorotate dehydrogenase (quinone), mitochondrial [Solanum lycop
JMSF050L06Sequence658007411 (2)ref|XP_009625733.1|1e-56PREDICTED: dihydroorotate dehydrogenase (quinone), mitochondrial [Nicotiana tom759020542ref|XP_004228528.1|6e-100PREDICTED: dihydroorotate dehydrogenase (quinone), mitochondrial [Solanum lycop

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF050L06+ TTCAACA
                      ____________________________________________________________
consensus TTCAACA
 
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JMSF050L06+ GCCTCAGCATTCTTGTCAAAACCAGCAGCAAGGCCTAAAGGATTTGAGAACCTTCTGCCC
                      ____________________________________________________________
consensus GCCTCAGCATTCTTGTCAAAACCAGCAGCAAGGCCTAAAGGATTTGAGAACCTTCTGCCC
 
. : . : . : . : . : . :
JMSF050L06+ CAAACTTCAAGGCCTAATATAGTAGGATCTGGTCTCTTCTCCTTTGGAACCCACCCACGA
                      ____________________________________________________________
consensus CAAACTTCAAGGCCTAATATAGTAGGATCTGGTCTCTTCTCCTTTGGAACCCACCCACGA
 
. : . : . : . : . : . :
JMSF050L06+ GAAGCAGCTGAAACAGCCAATCTGTGGGCTACCTCTAGATCCAGAAGTGCAAAAAACGGA
JMFF031C19+ GATCCAGAAGTGCAAAAAACGGA
                      ____________________________________________________________
consensus GAAGCAGCTGAAACAGCCAATCTGTGGGCTACCTCTAGATCCAGAAGTGCAAAAAACGGA
 
. : . : . : . : . : . :
JMSF050L06+ TTTACAAGTTTTGTTGCTGAGAATAGCCAGCCACAGAAAGTTTCTTCATCCACTGTACTA
JMFF031C19+ TTTACAAGTTTTGTTGCTGAGAATAGCCAGCCACAGAAAGTTTCTTCATCCACTGTACTA
                      ____________________________________________________________
consensus TTTACAAGTTTTGTTGCTGAGAATAGCCAGCCACAGAAAGTTTCTTCATCCACTGTACTA
 
. : . : . : . : . : . :
JMSF050L06+ GCATAAGCTCCTCCTGCTATTAGTAAACCAATGGTAGCTCCAGTAAGTAACCTTCCCTTT
JMFF031C19+ GCATAAGCTCCTCCTGCTATTAGTAAACCAATGGTAGCTCCAGTAAGTAACCTTCCCTTT
                      ____________________________________________________________
consensus GCATAAGCTCCTCCTGCTATTAGTAAACCAATGGTAGCTCCAGTAAGTAACCTTCCCTTT
 
. : . : . : . : . : . :
JMSF050L06+ TTTGATGAATGAGAAGCCCGAGGAGGAAGATTGGGAGCAGAAGAAGTGCAGTAATCATTC
JMFF031C19+ TTTGATGAATGAGAAGCCCGAGGAGGAAGATTGGGAGCAGAAGAAGTGCAGTAATCATTC
                      ____________________________________________________________
consensus TTTGATGAATGAGAAGCCCGAGGAGGAAGATTGGGAGCAGAAGAAGTGCAGTAATCATTC
 
. : . : . : . : . : . :
JMSF050L06+ CTGGGTAAAAAGCTGTTTGGTTTGAGCTTCCTGCAAATGCTTTCTCTTATTAAACCCGCT
JMFF031C19+ CTGGGTAAAAAGCTGTTTGGTTTGAGCTTCCTGCAAATGCTTTCTCTTATTAAACCCGCT
                      ____________________________________________________________
consensus CTGGGTAAAAAGCTGTTTGGTTTGAGCTTCCTGCAAATGCTTTCTCTTATTAAACCCGCT
 
. : . : . : . : . : . :
JMSF050L06+ GCAATCCTTGCTCCTCTCATTATTCTTTCTTCTTCTTCCTCTTCTTCTTCCCAGTATCAA
JMFF031C19+ GCAATCCTTGCTCCTCTCATTATTCTTTCTTCTTCTTCCTCTTCTTCTTCCCAGTATCAA
                      ____________________________________________________________
consensus GCAATCCTTGCTCCTCTCATTATTCTTTCTTCTTCTTCCTCTTCTTCTTCCCAGTATCAA
 
. : . : . : . : . : . :
JMSF050L06+ TGCTTCAAGAAACTCTTGCAGATAAAATAAAGTAAATTCTCCTCAAAGAGTCAAAGCTAT
JMFF031C19+ TGCTTCAAGAAACTCTTGCAGATAAAATAAAGTAAATTCTCCTCAAAGAGTCAAAGCTAT
                      ____________________________________________________________
consensus TGCTTCAAGAAACTCTTGCAGATAAAATAAAGTAAATTCTCCTCAAAGAGTCAAAGCTAT
 
. : . : . : . : . : . :
JMSF050L06+ GAAAAATTATCACGGACAGTTGCTTTCATAAGAGAAGGATAAATCAATTGGTACTAGAAA
JMFF031C19+ GAAAAATTATCACGGACAGTTGCTTTCATAAGAGAAGGATAAATCAATTGGTACTAGAAA
                      ____________________________________________________________
consensus GAAAAATTATCACGGACAGTTGCTTTCATAAGAGAAGGATAAATCAATTGGTACTAGAAA
 
. : . : . : . : . : . :
JMSF050L06+ AACGTGGATTGAGAGCGTGAGAGAGAAAGAGGTTTGCCTAAGCTTAAGAC
JMFF031C19+ AACGTGGATTGAGAGCGTGAGAGAGAAAGAGGTTTGCCTAAGCTTAAGACAGTTCAACTG
                      ____________________________________________________________
consensus AACGTGGATTGAGAGCGTGAGAGAGAAAGAGGTTTGCCTAAGCTTAAGACAGTTCAACTG